FFCP PHASE1:Hg19::chr17:42983770..42983781,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=89bp_to_U92979_5end | |association_with_transcript=89bp_to_U92979_5end | ||
|cluster_id=chr17:42983770..42983781,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_27_at_GFAP_5end | |description=CAGE_peak_27_at_GFAP_5end | ||
|id=chr17:42983770..42983781,- | |id=chr17:42983770..42983781,- | ||
|ontology_enrichment_celltype=CL:0000128!4.67e-13!7;CL:0000126!4.67e-13!7;CL:0000127!4.67e-13!7;CL:0002453!4.67e-13!7;CL:0002605!1.34e-12!3;CL:0002319!3.26e-09!25;CL:0000047!3.44e-07!8 | |ontology_enrichment_celltype=CL:0000128!4.67e-13!7;CL:0000126!4.67e-13!7;CL:0000127!4.67e-13!7;CL:0002453!4.67e-13!7;CL:0002605!1.34e-12!3;CL:0002319!3.26e-09!25;CL:0000047!3.44e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002605;2.85e-20;3!CL:0000128;5.63e-09;7!CL:0000126;5.63e-09;7!CL:0000127;5.63e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.58e-20,3;CL:0000128,6.20e-09,7;CL:0000126,6.20e-09,7;CL:0000127,6.20e-09,7;CL:0002453,6.20e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.35e-20;3!UBERON:0003057;3.35e-20;3!UBERON:0006601;5.73e-13;82!UBERON:0005425;4.72e-08;1!UBERON:0006222;2.04e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.90e-114!57;UBERON:0005068!8.90e-114!57;UBERON:0006241!8.90e-114!57;UBERON:0007135!8.90e-114!57;UBERON:0001017!1.32e-103!82;UBERON:0005743!2.06e-98!86;UBERON:0002616!1.31e-93!59;UBERON:0000073!2.16e-92!94;UBERON:0001016!2.16e-92!94;UBERON:0000955!4.42e-86!69;UBERON:0006238!4.42e-86!69;UBERON:0003075!1.29e-79!86;UBERON:0007284!1.29e-79!86;UBERON:0002780!2.84e-76!41;UBERON:0001890!2.84e-76!41;UBERON:0006240!2.84e-76!41;UBERON:0002346!1.16e-75!90;UBERON:0002020!3.19e-75!34;UBERON:0003528!3.19e-75!34;UBERON:0001893!8.62e-75!34;UBERON:0003080!2.59e-74!42;UBERON:0002791!8.93e-72!33;UBERON:0001869!8.19e-68!32;UBERON:0007023!3.02e-52!115;UBERON:0004121!1.63e-49!169;UBERON:0003056!4.20e-49!61;UBERON:0000924!3.85e-48!173;UBERON:0006601!3.85e-48!173;UBERON:0000033!4.14e-47!123;UBERON:0000956!6.32e-46!25;UBERON:0000203!6.32e-46!25;UBERON:0000153!1.74e-44!129;UBERON:0007811!1.74e-44!129;UBERON:0003076!1.87e-39!15;UBERON:0003057!1.87e-39!15;UBERON:0002619!4.13e-36!22;UBERON:0004732!2.02e-32!13;UBERON:0002308!5.41e-32!9;UBERON:0000125!5.41e-32!9;UBERON:0002420!9.35e-32!9;UBERON:0007245!9.35e-32!9;UBERON:0010009!9.35e-32!9;UBERON:0010011!9.35e-32!9;UBERON:0000454!9.35e-32!9;UBERON:0001950!6.43e-30!20;UBERON:0004733!7.52e-29!12;UBERON:0002028!7.52e-29!12;UBERON:0007277!7.52e-29!12;UBERON:0000025!3.29e-28!194;UBERON:0009663!6.66e-25!7;UBERON:0002298!4.80e-23!8;UBERON:0004111!9.86e-21!241;UBERON:0000349!1.11e-18!5;UBERON:0002680!1.31e-18!9;UBERON:0001895!1.31e-18!9;UBERON:0010092!1.31e-18!9;UBERON:0000477!5.78e-17!286;UBERON:0000064!5.30e-16!219;UBERON:0001871!1.03e-15!7;UBERON:0000483!7.19e-15!309;UBERON:0000369!1.05e-14!4;UBERON:0002435!1.05e-14!4;UBERON:0000204!1.05e-14!4;UBERON:0010082!1.05e-14!4;UBERON:0000119!1.26e-14!312;UBERON:0000200!1.69e-14!6;UBERON:0002240!1.15e-12!3;UBERON:0001896!1.40e-12!3;UBERON:0005290!1.40e-12!3;UBERON:0010096!1.40e-12!3;UBERON:0006331!2.12e-12!3;UBERON:0000988!4.32e-12!3;UBERON:0000475!7.16e-12!365;UBERON:0005383!1.21e-11!3;UBERON:0005382!1.21e-11!3;UBERON:0002771!3.71e-11!3;UBERON:0002037!2.73e-09!6;UBERON:0006215!2.73e-09!6;UBERON:0005162!4.97e-09!2;UBERON:0000122!4.97e-09!2;UBERON:0002148!8.18e-09!2;UBERON:0009662!8.18e-09!2;UBERON:0001954!9.16e-09!2;UBERON:0003022!9.16e-09!2;UBERON:0002421!9.16e-09!2;UBERON:0002600!9.16e-09!2;UBERON:0001897!1.15e-08!2;UBERON:0001873!1.29e-08!2;UBERON:0010122!1.29e-08!2;UBERON:0001876!1.44e-08!2;UBERON:0001875!2.34e-08!2;UBERON:0006514!2.34e-08!2;UBERON:0005174!9.58e-08!5;UBERON:0001137!9.58e-08!5;UBERON:0000062!3.48e-07!511;UBERON:0002021!5.42e-07!5;UBERON:0001872!5.66e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!8.90e-114!57;UBERON:0005068!8.90e-114!57;UBERON:0006241!8.90e-114!57;UBERON:0007135!8.90e-114!57;UBERON:0001017!1.32e-103!82;UBERON:0005743!2.06e-98!86;UBERON:0002616!1.31e-93!59;UBERON:0000073!2.16e-92!94;UBERON:0001016!2.16e-92!94;UBERON:0000955!4.42e-86!69;UBERON:0006238!4.42e-86!69;UBERON:0003075!1.29e-79!86;UBERON:0007284!1.29e-79!86;UBERON:0002780!2.84e-76!41;UBERON:0001890!2.84e-76!41;UBERON:0006240!2.84e-76!41;UBERON:0002346!1.16e-75!90;UBERON:0002020!3.19e-75!34;UBERON:0003528!3.19e-75!34;UBERON:0001893!8.62e-75!34;UBERON:0003080!2.59e-74!42;UBERON:0002791!8.93e-72!33;UBERON:0001869!8.19e-68!32;UBERON:0007023!3.02e-52!115;UBERON:0004121!1.63e-49!169;UBERON:0003056!4.20e-49!61;UBERON:0000924!3.85e-48!173;UBERON:0006601!3.85e-48!173;UBERON:0000033!4.14e-47!123;UBERON:0000956!6.32e-46!25;UBERON:0000203!6.32e-46!25;UBERON:0000153!1.74e-44!129;UBERON:0007811!1.74e-44!129;UBERON:0003076!1.87e-39!15;UBERON:0003057!1.87e-39!15;UBERON:0002619!4.13e-36!22;UBERON:0004732!2.02e-32!13;UBERON:0002308!5.41e-32!9;UBERON:0000125!5.41e-32!9;UBERON:0002420!9.35e-32!9;UBERON:0007245!9.35e-32!9;UBERON:0010009!9.35e-32!9;UBERON:0010011!9.35e-32!9;UBERON:0000454!9.35e-32!9;UBERON:0001950!6.43e-30!20;UBERON:0004733!7.52e-29!12;UBERON:0002028!7.52e-29!12;UBERON:0007277!7.52e-29!12;UBERON:0000025!3.29e-28!194;UBERON:0009663!6.66e-25!7;UBERON:0002298!4.80e-23!8;UBERON:0004111!9.86e-21!241;UBERON:0000349!1.11e-18!5;UBERON:0002680!1.31e-18!9;UBERON:0001895!1.31e-18!9;UBERON:0010092!1.31e-18!9;UBERON:0000477!5.78e-17!286;UBERON:0000064!5.30e-16!219;UBERON:0001871!1.03e-15!7;UBERON:0000483!7.19e-15!309;UBERON:0000369!1.05e-14!4;UBERON:0002435!1.05e-14!4;UBERON:0000204!1.05e-14!4;UBERON:0010082!1.05e-14!4;UBERON:0000119!1.26e-14!312;UBERON:0000200!1.69e-14!6;UBERON:0002240!1.15e-12!3;UBERON:0001896!1.40e-12!3;UBERON:0005290!1.40e-12!3;UBERON:0010096!1.40e-12!3;UBERON:0006331!2.12e-12!3;UBERON:0000988!4.32e-12!3;UBERON:0000475!7.16e-12!365;UBERON:0005383!1.21e-11!3;UBERON:0005382!1.21e-11!3;UBERON:0002771!3.71e-11!3;UBERON:0002037!2.73e-09!6;UBERON:0006215!2.73e-09!6;UBERON:0005162!4.97e-09!2;UBERON:0000122!4.97e-09!2;UBERON:0002148!8.18e-09!2;UBERON:0009662!8.18e-09!2;UBERON:0001954!9.16e-09!2;UBERON:0003022!9.16e-09!2;UBERON:0002421!9.16e-09!2;UBERON:0002600!9.16e-09!2;UBERON:0001897!1.15e-08!2;UBERON:0001873!1.29e-08!2;UBERON:0010122!1.29e-08!2;UBERON:0001876!1.44e-08!2;UBERON:0001875!2.34e-08!2;UBERON:0006514!2.34e-08!2;UBERON:0005174!9.58e-08!5;UBERON:0001137!9.58e-08!5;UBERON:0000062!3.48e-07!511;UBERON:0002021!5.42e-07!5;UBERON:0001872!5.66e-07!5 | ||
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|short_description=p27@GFAP | |short_description=p27@GFAP | ||
}} | }} |
Latest revision as of 23:09, 24 September 2015
Short description: | p27@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 89bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.58e-20 | 3 |
oligodendrocyte | 6.20e-09 | 7 |
macroglial cell | 6.20e-09 | 7 |
astrocyte | 6.20e-09 | 7 |
oligodendrocyte precursor cell | 6.20e-09 | 7 |