FFCP PHASE1:Hg19::chr19:36523709..36523796,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:36523709..36523796,-
|short_description=p1@CLIP3
|description=CAGE_peak_1_at_CLIP3_5end
|association_with_transcript=0bp_to_ENST00000360535,NM_015526,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25999 | |EntrezGene=25999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24314 | |HGNC=24314 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DZ5 | |UniProt=Q96DZ5 | ||
|association_with_transcript=0bp_to_ENST00000360535,NM_015526,uc002ocz.1_5end | |||
|cluster_id=chr19:36523709..36523796,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_CLIP3_5end | |||
|id=chr19:36523709..36523796,- | |||
|ontology_enrichment_celltype=CL:0000055!7.71e-24!180;CL:0000183!1.60e-11!59;CL:0000057!4.46e-11!75;CL:0000393!1.09e-10!60;CL:0000211!1.09e-10!60;CL:0000680!1.52e-10!57;CL:0000056!1.52e-10!57;CL:0000355!1.52e-10!57;CL:0000187!5.02e-10!54;CL:0000192!6.08e-09!42;CL:0000514!6.08e-09!42;CL:0000222!1.19e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000192;3.82e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.25e-11,76;CL:0000393,3.62e-11,61;CL:0000211,3.62e-11,61;CL:0000680,5.03e-11,58;CL:0000056,5.03e-11,58;CL:0000355,5.03e-11,58;CL:0000187,1.71e-10,55;CL:0000192,2.13e-09,43;CL:0000514,2.13e-09,43;CL:0000222,4.02e-09,121 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.58e-07;82!CL:0000514;3.82e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;5.05e-18;53!UBERON:0002616;5.05e-18;53!UBERON:0001893;6.44e-18;34!UBERON:0003528;8.14e-18;34!UBERON:0002020;8.14e-18;34!UBERON:0002780;9.18e-18;41!UBERON:0001890;9.18e-18;41!UBERON:0001869;9.70e-18;32!UBERON:0002791;1.16e-17;32!UBERON:0002619;9.95e-16;22!UBERON:0000956;2.14e-15;25!UBERON:0000203;2.14e-15;25!UBERON:0001017;5.56e-15;75!UBERON:0001950;1.78e-14;20!UBERON:0000955;2.85e-14;68!UBERON:0001016;5.87e-13;83!UBERON:0004732;2.44e-08;13!UBERON:0004733;5.01e-08;12!UBERON:0002028;5.01e-08;12!UBERON:0010314;1.89e-07;132!UBERON:0011216;2.57e-07;132!UBERON:0002420;5.60e-07;9!UBERON:0007245;5.60e-07;9!UBERON:0010009;5.60e-07;9!UBERON:0010011;5.60e-07;9!UBERON:0000454;5.60e-07;9!UBERON:0000125;6.63e-07;9!UBERON:0002308;6.63e-07;9 | |||
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|phase1_expression=34.7005704406763,45.8175121126704,49.7569046458778,41.0300523247835,44.2491483483015,34.8935409640147,7.59899634504932,24.6370750636464,60.8562513705624,8.10921990454979,6.28021051175185,8.51921351307672,23.7390280405608,66.7100642454651,83.1807413077069,23.5313801258121,22.9023920649111,26.2911632539454,25.3725055371064,48.2634547661009,66.912226728115,89.334595621255,46.6564659023622,23.1317778373174,25.2340705585554,0,0.246301768349837,0,0.393364276848904,0,1.70297735647684,0,2.409647350226,3.32778609150109,0,0,0.880801318004542,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25199300053181,2.24203425192614,1.58030450865046,0.393419540227666,0,0.616804496998528,0,0,0,0,1.55974639639243,0.589211814949674,0.221533894583621,0,0.896639238079726,1.30059347559878,0,0.276350017785848,0.289803085735052,0.593146252648242,1.07016331235885,0,0.793165398882963,0,0.34362744548263,0.506039384039006,0.318565414324097,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0.473554504088034,0.821127996921047,0,0,0.289648807765598,97.5227465255847,36.2178464239963,21.6087729515566,22.4092274478431,62.6672388294862,61.7046170773109,26.2444362526863,36.4976152726977,26.5642836231031,35.4767035940102,36.6271056340336,72.8243659767282,2.91436230634034,0.370784442784429,0,0,0,0,0,0,17.0935670335366,12.9035189265919,19.7870085916329,29.3960129800485,21.8139706829151,22.8347974810256,23.8254261851964,8.52775305258785,8.89415656716776,10.3763389957048,20.9471244896756,29.650612123022,35.6330604020327,4.04429388380456,34.8361037589157,12.5019619597712,25.147289734131,14.9773269042819,22.9974956198825,25.6301728083395,19.2361831126928,0,0,3.92484646928281,47.2123354110553,28.7451261478596,35.3532512771294,41.3044733878292,24.4721183716866,36.44404400925,29.8897188043174,37.000132262574,50.1049766993624,21.6884182032198,11.2788713148287,63.4187621832263,63.9555276172799,38.4287148207426,26.8457666074076,24.5302883264113,32.5798123602926,8.22041490506354,6.96053660782966,4.07307339436521,35.7269799696063,15.2314553466592,71.7080921359812,67.7161628650771,89.0160945402805,70.082424869228,140.130537654166,13.4668891163253,15.2644594243796,20.7798086613137,56.6281130936281,44.4407303908579,74.8185533354852,6.12533789064114,42.874122929638,61.0774132021103,43.2341078365506,40.2122068753099,60.800992250679,72.1393512127762,55.8350568994769,21.4345941946408,38.3901800335123,70.9338905625962,73.3637692179126,65.6282990684376,53.2514388774921,38.084293130048,25.7732100311941,0.193260853163297,2.18196896472668,0.286804595389004,19.6377666868649,16.1686317352212,17.4290914304278,28.6104511842422,14.3822884999108,14.5990943630332,75.0957755183117,83.6213219650751,80.1182543844387,97.5172648867156,84.4598993553415,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,25.097285457238,25.2435192846202,58.0319355977274,101.436010856024,0,0,8.27105869353966,0,0,28.1371208889582,5.70701484124853,1.1240175325762,0.100528972411631,3.70353780634118,38.7711883319286,25.9983696319895,14.4331342025273,42.198667410928,54.4776341254213,21.5106007164,14.3525508898749,14.8398238742987,0,0,0,0,0.148631162288728,1.87467667973554,8.39910640994298,2.1266264586358,0.447792613514241,0,0,1.47798971368783,1.84901711427775,0.414656231081544,0.576479813667846,0.75745460055828,5.90530416917172,25.9752129379629,39.853932051416,35.9252136647681,3.59896224461632,5.1058319833466,7.14566081576446,19.0622843387113,54.49500860416,10.7073897298587,47.5719913988622,604.439393489681,1.690605505112,55.0491901330682,55.123941563024,22.6342489350685,18.4403871630262,27.4414844386582,45.6099799769491,94.9587809435025,51.8641412171884,5.5375151329935,41.2254660541353,5.543663110534,33.1583314765545,58.3927417262197,35.8903038343585,0,0,0,26.1191092485825,67.7685421421272,48.4965477138443,31.7071061601998,49.5197937346424,35.991253611219,0,0.197030760201927,0,0.256686072559497,106.719742173435,197.812577863585,104.393989724989,105.200214629971,89.949363983096,0,0,0,104.901225419865,104.535638901473,42.8598737445582,55.1122783056639,58.7031373142662,45.1028906997053,54.5878993866043,107.437757602796,68.2222512167955,50.7018049333274,15.9414143648505,55.1263813939692,61.9480171157431,183.269883385125,123.531632571908,0.206768026122887,0,0.213455115606889,4.24378600024763,16.6435439510497,19.0505884797699,39.6972492510043,55.3997723569905,62.3065409641423,55.0998341799514,49.6356031594702,41.0177498916199,43.0412392690474,16.6546469306868,28.5874377754135,22.6670950598113,35.3093011844862,22.4286030427721,0.120859449591622,7.21823293091825,0.184161977871793,31.229529900773,39.877965793471,88.115606852733,12.1823895485001,11.2442392172446,28.2365916903668,11.6911379722609,16.6771573650744,28.4333460177242,13.2673090115682,14.4663663788433,74.0290812913389,50.3960373831566,117.395407082036,3.56826782263054,4.15538004464362,17.6861056230521,0,0,11.0273553800047,53.466387249052,28.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| ||
|short_description=p1@CLIP3 | |||
}} | }} |
Latest revision as of 15:22, 17 September 2015
Short description: | p1@CLIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLIP3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000360535, NM_015526, uc002ocz.1_5end |
EntrezGene: | CLIP3 |
HGNC: | 24314 |
UniProt: | Q96DZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.25e-11 | 76 |
electrically responsive cell | 3.62e-11 | 61 |
electrically active cell | 3.62e-11 | 61 |
muscle precursor cell | 5.03e-11 | 58 |
myoblast | 5.03e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.03e-11 | 58 |
muscle cell | 1.71e-10 | 55 |
smooth muscle cell | 2.13e-09 | 43 |
smooth muscle myoblast | 2.13e-09 | 43 |
mesodermal cell | 4.02e-09 | 121 |