FFCP PHASE1:Hg19::chr6:31021973..31021990,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:31021973..31021990,+
|short_description=p1@HCG22
|description=CAGE_peak_1_at_HCG22_5end
|association_with_transcript=0bp_to_ENST00000426185,NR_003948,uc003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285834 | |EntrezGene=285834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27780 | |HGNC=27780 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000426185,NR_003948,uc003nsj.1,uc010jsi.1_5end | |||
|cluster_id=chr6:31021973..31021990,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_HCG22_5end | |||
|id=chr6:31021973..31021990,+ | |||
|ontology_enrichment_celltype=CL:0002605!5.69e-08!3;CL:0000064!2.54e-07!3;CL:0005012!2.54e-07!3;CL:0000067!2.54e-07!3;CL:0002304!2.54e-07!3;CL:0000047!4.80e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.54e-15;2!CL:0002605;6.44e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,5.69e-11,3;CL:0000047,1.03e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.13e-24;3!UBERON:0003057;9.13e-24;3!UBERON:0006601;1.47e-09;82!UBERON:0006222;1.27e-08;1!UBERON:0005425;1.27e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@HCG22 | |||
}} | }} |
Latest revision as of 19:41, 17 September 2015
Short description: | p1@HCG22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HCG22_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000426185, NR_003948, uc003nsj.1, uc010jsi.1_5end |
EntrezGene: | HCG22 |
HGNC: | 27780 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 5.69e-11 | 3 |
neuronal stem cell | 1.03e-08 | 8 |