FFCP PHASE1:Hg19::chrX:16964773..16964793,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:16964773..16964793,+
|short_description=p4@REPS2
|description=CAGE_peak_4_at_REPS2_5end
|association_with_transcript=-20bp_to_ENST00000357277,ENST000003800...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9185 | |EntrezGene=9185 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9963 | |HGNC=9963 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFH8,E9PFM4 | |UniProt=Q8NFH8,E9PFM4 | ||
|association_with_transcript=-20bp_to_ENST00000357277,ENST00000380063,NM_001080975,NM_004726,uc004cxv.1,uc004cxw.1_5end | |||
|cluster_id=chrX:16964773..16964793,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_REPS2_5end | |||
|id=chrX:16964773..16964793,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;7.76e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.67e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.18e-20;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p4@REPS2 | |||
}} | }} |
Latest revision as of 06:27, 20 September 2015
Short description: | p4@REPS2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_REPS2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -20bp_to_ENST00000357277, ENST00000380063, NM_001080975, NM_004726, uc004cxv.1, uc004cxw.1_5end |
EntrezGene: | REPS2 |
HGNC: | 9963 |
UniProt: | Q8NFH8E9PFM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.67e-10 | 3 |