FFCP PHASE1:Hg19::chr6:70992888..70992906,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1297 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2217 | |||
|TSSclassifier=strong | |||
|UniProt=P20849 | |||
|association_with_transcript=4bp_to_NM_078485,uc003pff.3_5end | |||
|cluster_id=chr6:70992888..70992906,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_1_at_COL9A1_5end | |||
|id=chr6:70992888..70992906,- | |||
|ontology_enrichment_celltype=CL:0002322!3.08e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.94e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.19e-11,5;CL:0000047,1.05e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.46e-16;82!UBERON:0006241;6.42e-08;3!UBERON:0003057;6.42e-08;3!UBERON:0006215;5.52e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;2.09e-49;34!UBERON:0002020;2.09e-49;34!UBERON:0001893;2.36e-49;34!UBERON:0002791;1.13e-48;32!UBERON:0001869;2.35e-48;32!UBERON:0002780;6.15e-47;41!UBERON:0001890;6.15e-47;41!UBERON:0002619;5.67e-46;22!UBERON:0000073;3.08e-43;53!UBERON:0002616;3.08e-43;53!UBERON:0001950;1.56e-41;20!UBERON:0000956;7.23e-40;25!UBERON:0000203;7.23e-40;25!UBERON:0001017;2.71e-29;75!UBERON:0000955;2.96e-29;68!UBERON:0001016;3.58e-26;83!UBERON:0000125;2.40e-20;9!UBERON:0002308;2.40e-20;9!UBERON:0002420;4.54e-20;9!UBERON:0007245;4.54e-20;9!UBERON:0010009;4.54e-20;9!UBERON:0010011;4.54e-20;9!UBERON:0000454;4.54e-20;9!UBERON:0009663;3.86e-16;7!UBERON:0004732;4.37e-16;13!UBERON:0001871;8.70e-15;6!UBERON:0000922;1.90e-14;49!UBERON:0002298;3.16e-14;6!UBERON:0004733;3.82e-14;12!UBERON:0002028;3.82e-14;12!UBERON:0000200;5.19e-13;6!UBERON:0000349;5.42e-12;5!UBERON:0007023;7.22e-12;114!UBERON:0001872;3.13e-11;5!UBERON:0002021;4.46e-11;5!UBERON:0011216;1.38e-10;132!UBERON:0000369;9.89e-10;4!UBERON:0002435;9.89e-10;4!UBERON:0000204;9.89e-10;4!UBERON:0002680;1.21e-08;9!UBERON:0001895;1.21e-08;9!UBERON:0001894;4.55e-08;7!UBERON:0000988;4.57e-08;3!UBERON:0002240;6.42e-08;3!UBERON:0005174;6.42e-08;3!UBERON:0001137;6.42e-08;3!UBERON:0001896;7.81e-08;3!UBERON:0005290;7.81e-08;3!UBERON:0005383;1.02e-07;3!UBERON:0005382;1.02e-07;3!UBERON:0010314;1.13e-07;132!UBERON:0001870;2.08e-07;3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0.85870796139317,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,2.17430079477356,0.886917589850256,0.263504357079378,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763188581434,3.44577397635862,3.95059405756363,3.93912009058408,3.5324919122588,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,9.62222361293138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,1.30139853857622,0,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,7.17414023693615,0,0,0,0,0.276283915531148,1.0077309914171,0,0,0,0,0,0,0.197286811273867,0,0,5.81599647657131,1.29875337426592,9.98068990005971,0,0,0,0,0,0,0,0,0,2.65722415744152,7.95936494927692,1.52581736317083,4.64432891711143,2.06883333267483,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,8.82954842046869,0,4.91955336023212,0,0,0,0.394584402849391,1.20990716048664,3.0607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,61.0148000107438,0,0,4.17851253308799,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,4.20294202096853,5.75002591346371,0,0,0,4.18923601908381,0.916641696046735,1.43574604915363,0,0,0.446342914883745,13.1679606073983,0,0,0,0,0,0,0,5.56660782866512,8.98942480336399,2.89355667237035,4.12618309791701,2.07720169014593,0,0,3.03747783290123,0,0,8.55009786600469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78346938537737,7.53725829933333,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.80660409274515,4.38168257472749,2.86704597845036,8.31967886526392,6.95479712943495,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80685431837269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,4.17489963126987,4.25089728976755,7.18352365757181,1.64093091392604,2.52071696221718,3.80364888553198,2.58361033010962,5.71077681036618,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,3.64702956939331,3.90539049306924,2.27355476151302,2.66346402814409,11.4864709893826,0,0,0,0,0.535701835878287,2.01770233331294,0.606965604236632,2.04895972216168,0,0,0,6.32118516684535,3.09132035745391,0,0,0.078493092850514,5.02769887731206,0,6.39211104356647,0,0,82.7698381565681,0,0,1.91244099532837,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,1.94284397223656,0,0,0,0,0.549702583727146,0,0.385870790539723,5.68254857310289,0,0.245148321753905,0,3.14093547383912,5.04978880556046,8.0304588240846,0,0,0.322289439867886,0,0,0,0,5.84269110597214,0,9.74709165429869,31.0809977520574,3.60354898011848,3.49080552272302,4.7612415646386,0,0,0,0.252332849670158,0.655593431782173,0,0.101988829741982,0,0,0,0.0757786982182394,0,4.1458471972939,10.2398665903276,0.213233981900981,8.33225510123091,0.129177819672012,0.31037357147929,0,0,1.0105859447911,0.653150243690884,1.36893320434112,0.0673520530145875,0,12.3084331922025,0,0,0,0,2.34640942403454,0.122241444182866,6.51033885305182,0,0.201273793591026,0 | |||
|short_description=p1@COL9A1 | |||
}} |
Latest revision as of 15:23, 19 September 2015
Short description: | p1@COL9A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL9A1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 4bp_to_NM_078485, uc003pff.3_5end |
EntrezGene: | COL9A1 |
HGNC: | 2217 |
UniProt: | P20849 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.19e-11 | 5 |
neuronal stem cell | 1.05e-08 | 8 |