FFCP PHASE1:Hg19::chrX:43832628..43832644,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4693 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7678 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000470584_5end | |||
|cluster_id=chrX:43832628..43832644,- | |||
|coexpression_cluster_id=C1112 | |||
|description=CAGE_peak_1_at_NDP_5end | |||
|id=chrX:43832628..43832644,- | |||
|ontology_enrichment_celltype=CL:0000128!4.93e-07!7;CL:0000126!4.93e-07!7;CL:0000127!4.93e-07!7;CL:0002453!4.93e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.35e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;5.41e-49;34!UBERON:0002020;5.41e-49;34!UBERON:0001893;8.43e-49;34!UBERON:0002791;6.83e-48;32!UBERON:0001869;7.41e-48;32!UBERON:0002780;9.07e-41;41!UBERON:0001890;9.07e-41;41!UBERON:0000956;1.56e-40;25!UBERON:0000203;1.56e-40;25!UBERON:0000073;4.75e-39;53!UBERON:0002616;4.75e-39;53!UBERON:0002619;4.60e-35;22!UBERON:0001950;2.89e-31;20!UBERON:0001017;1.78e-27;75!UBERON:0000955;2.60e-26;68!UBERON:0001016;6.88e-24;83!UBERON:0002420;8.23e-18;9!UBERON:0007245;8.23e-18;9!UBERON:0010009;8.23e-18;9!UBERON:0010011;8.23e-18;9!UBERON:0000454;8.23e-18;9!UBERON:0000125;9.44e-18;9!UBERON:0002308;9.44e-18;9!UBERON:0009663;3.14e-14;7!UBERON:0004732;5.24e-13;13!UBERON:0000200;1.55e-12;6!UBERON:0007023;2.69e-12;114!UBERON:0002298;7.27e-12;6!UBERON:0004733;8.50e-12;12!UBERON:0002028;8.50e-12;12!UBERON:0000349;6.01e-11;5!UBERON:0011216;2.65e-10;132!UBERON:0002021;2.87e-10;5!UBERON:0001872;5.30e-10;5!UBERON:0000369;3.28e-09;4!UBERON:0002435;3.28e-09;4!UBERON:0000204;3.28e-09;4!UBERON:0010314;6.62e-08;132!UBERON:0001871;1.35e-07;6!UBERON:0005383;2.55e-07;3!UBERON:0005382;2.55e-07;3!UBERON:0002680;2.61e-07;9!UBERON:0001895;2.61e-07;9!UBERON:0001870;4.54e-07;3!UBERON:0000988;7.74e-07;3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.408001382488506,0.940364164434263,15.4567433050771,10.4024563055392,5.77496142136093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,2.61188314765726,1.70215567407342,2.4912889959823,0,0,0,0,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,16.7010048880731,5.35298357332899,0.850813354476611,0.443458794925128,0.351339142772504,2.48860243445654,0,0,0.97364218096405,2.08955684759121,9.97184703891489,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,2.49728061464256,1.71141546463335,1.64393548606981,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0.741800787835671,0,0,1.34668891163253,0.125118519871964,0,0,0,1.80285670687916,0.453728732640084,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0.109750285408626,0,0,0,0,0,0,3.014190529352,0,0,0,0,0,0,0,2.57404691653161,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0.358121926479791,0,0,0,0,30.4913549066956,2.60279707715243,5.41302168944387,13.0662686960792,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0.368738337083406,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.328508624055237,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,1.54561517471583,0,0,0.574265537996172,0,0,0,0,0,0.413509717453592,0,0,0.170453254832202,0.356128142586949,0,0,0,0,0,0,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0.429374660225974,0.372158369359667,0,0,0,0,0,0,0,0,0,1.61745985258653,3.17020642346017,0,0,0.487426979262569,0,0,0,0,0,2.65375590096488,1.31535265576129,0,0,0,0.92947049429925,0.281695602532241,0,0,0,0.709522128141196,0.633322905892992,0.658589785919804,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,5.96488588659779,16.176982887209,0.222617410045812,0,0,0,0,0,1.43176155503017,0,0,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,3.87733098438087,15.6778085893529,9.98068990005971,0,0,0,0,0,0,0,0,0,8.85741385813839,16.0393263371793,1.52581736317083,10.7261882133288,4.72876190325676,6.14279112031123,0,0,4.30921447621264,0,0,0,0,7.97502899329799,0.274792780205587,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,15.6370628515171,0,7.49646226321085,0,0,0,0.789168805698781,0,0.91821828489147,0.442306057399416,0,0,0,0,0,0,0,0,0.173559738335131,0,0,1.04836000945218,0,0,0,0,0,37.4205977171961,6.10148000107438,0,0,11.7124972518376,0,0,0.213452994739353,0,0,0.229073192331831,0,0,0,0,0,0,0.101998217636322,0,4.20294202096853,9.72028190133151,0,4.29765441419957,0,1.67569440763353,0.916641696046735,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,10.3379859675209,14.8461712661617,0,0,0,0,0,12.210660888263,0,0,0.157363764404994,0,0,0,0,0,5.085370753095,0.542999601753713,1.72844298240254,5.22539776175055,0,0,0,0.113312091520126,0,0,7.49841146896993,10.5786081394152,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,5.31640907980192,9.88412745705902,13.6458114470085,5.73409195690071,7.76503360757966,8.94188202355922,0,0.249960815924213,0,0,0,0,0,0,0,0,0.568209015825267,0.50313580350515,1.77962244319307,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0.380805212168795,0.813741466409323,0.181848659202559,0,0.464033759878494,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7197761259592,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0,0,0,1.72519698234691,0,0,0,0,0,0,0,0,0,0,0,11.047426716591,5.6678630530234,13.2496103017436,5.12790910601888,7.56215088665154,9.54370084006207,8.71968486411996,1.42769420259154,0,0,0,0,0,0,1.19349733269765,4.58783002930469,0,0,0,0,2.66140955190681,9.38772426195686,3.12431239445539,11.1610870110639,9.95628220044337,2.18789923607288,0,2.48105589194647,0,1.27762427639595,0.535701835878287,1.00885116665647,0.606965604236632,0,8.16061805496277,0,0.514464028312255,6.25321543386852,10.3263254493673,0,0.333694205676207,1.0989032999072,12.5692471932802,4.48435461302062,0,0,0,2.50167904618297,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.795803100645473,0,0,0,0,0.231522474323834,0,0,0,0,8.04864715171276,6.23797440686881,4.6492130034174,0,0,0,0,0,0.352894871715692,2.24675826729671,0,0,8.88705415538998,0,12.2384682343646,0.436350690340377,0,0.371995018166751,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.909344378618873,0.267964130156178,4.97501663675268,11.1707635530847,0,0.476128862927481,0,0.124149428591716,0,2.16400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| |||
|short_description=p1@NDP | |||
}} |
Latest revision as of 02:59, 25 September 2015
Short description: | p1@NDP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NDP_5end |
Coexpression cluster: | C1112_extraskeletal_corpus_Neural_thalamus_substantia_pons_medulla |
Association with transcript: | 0bp_to_ENST00000470584_5end |
EntrezGene: | NDP |
HGNC: | 7678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.32e-07 | 3 |