FFCP PHASE1:Hg19::chr11:790060..790127,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:790060..790127,- to FFCP PHASE1:Hg19::chr11:790060..790127,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51286 | |EntrezGene=51286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24153 | |HGNC=24153 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N111 | |UniProt=Q8N111 | ||
|association_with_transcript=0bp_to_ENST00000330106,ENST00000524587,NM_016564,uc001lrh.1_5end | |||
|cluster_id=chr11:790060..790127,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_CEND1_5end | |||
|id=chr11:790060..790127,- | |||
|ontology_enrichment_celltype=CL:0000055!2.69e-23!180;CL:0000393!5.47e-15!60;CL:0000211!5.47e-15!60;CL:0000183!2.57e-14!59;CL:0000187!8.94e-14!54;CL:0000680!1.02e-13!57;CL:0000056!1.02e-13!57;CL:0000355!1.02e-13!57;CL:0000192!2.84e-13!42;CL:0000514!2.84e-13!42;CL:0000359!8.86e-11!32;CL:0000057!7.06e-10!75;CL:0000222!5.24e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.42e-10;32!CL:0000192;4.48e-10;43!CL:0000187;7.24e-08;55!CL:0000393;1.05e-07;61!CL:0000211;1.05e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,5.51e-15,61;CL:0000211,5.51e-15,61;CL:0000187,4.73e-14,55;CL:0000192,1.17e-13,43;CL:0000514,1.17e-13,43;CL:0000680,1.26e-13,58;CL:0000056,1.26e-13,58;CL:0000355,1.26e-13,58;CL:0000359,6.06e-11,32;CL:0000057,7.84e-09,76;CL:0000222,6.92e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;4.48e-10;43!UBERON:0006601;1.84e-07;82!CL:0000355;1.97e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.64e-36!94;UBERON:0001016!8.64e-36!94;UBERON:0005743!1.82e-35!86;UBERON:0001017!1.43e-34!82;UBERON:0001049!3.04e-34!57;UBERON:0005068!3.04e-34!57;UBERON:0006241!3.04e-34!57;UBERON:0007135!3.04e-34!57;UBERON:0003075!1.76e-32!86;UBERON:0007284!1.76e-32!86;UBERON:0002616!3.13e-31!59;UBERON:0002346!7.65e-30!90;UBERON:0000955!1.84e-29!69;UBERON:0006238!1.84e-29!69;UBERON:0002780!2.55e-26!41;UBERON:0001890!2.55e-26!41;UBERON:0006240!2.55e-26!41;UBERON:0003080!5.42e-25!42;UBERON:0003056!1.25e-23!61;UBERON:0001893!2.25e-23!34;UBERON:0002020!2.51e-23!34;UBERON:0003528!2.51e-23!34;UBERON:0002791!1.19e-22!33;UBERON:0001869!2.87e-22!32;UBERON:0004121!3.95e-22!169;UBERON:0000119!4.01e-22!312;UBERON:0000025!4.47e-22!194;UBERON:0000483!8.38e-22!309;UBERON:0000924!7.13e-21!173;UBERON:0006601!7.13e-21!173;UBERON:0000033!1.80e-20!123;UBERON:0000153!8.65e-20!129;UBERON:0007811!8.65e-20!129;UBERON:0000475!9.52e-20!365;UBERON:0000956!9.39e-18!25;UBERON:0000203!9.39e-18!25;UBERON:0004111!1.47e-17!241;UBERON:0000477!1.60e-17!286;UBERON:0002619!2.87e-16!22;UBERON:0000481!3.61e-16!347;UBERON:0001950!5.41e-15!20;UBERON:0000914!1.24e-14!83;UBERON:0002329!1.24e-14!83;UBERON:0003077!1.24e-14!83;UBERON:0003059!1.24e-14!83;UBERON:0007282!1.24e-14!83;UBERON:0009618!1.24e-14!83;UBERON:0007285!1.24e-14!83;UBERON:0001637!1.21e-13!42;UBERON:0003509!1.21e-13!42;UBERON:0004572!1.21e-13!42;UBERON:0004290!1.48e-13!70;UBERON:0007023!2.83e-13!115;UBERON:0001134!3.34e-11!61;UBERON:0002036!3.34e-11!61;UBERON:0003082!3.34e-11!61;UBERON:0002385!3.53e-11!63;UBERON:0001015!3.53e-11!63;UBERON:0000383!3.53e-11!63;UBERON:0004573!3.71e-11!33;UBERON:0004571!3.71e-11!33;UBERON:0001981!5.32e-11!60;UBERON:0007500!5.32e-11!60;UBERON:0004537!5.32e-11!60;UBERON:0006965!5.32e-11!60;UBERON:0003076!2.85e-10!15;UBERON:0003057!2.85e-10!15;UBERON:0002049!5.75e-10!79;UBERON:0007798!5.75e-10!79;UBERON:0000486!1.16e-09!82;UBERON:0004872!1.48e-09!84;UBERON:0000055!2.19e-09!69;UBERON:0004732!4.13e-09!13;UBERON:0004733!1.43e-08!12;UBERON:0002028!1.43e-08!12;UBERON:0007277!1.43e-08!12;UBERON:0000064!3.94e-08!219;UBERON:0000468!1.32e-07!659;UBERON:0001009!1.58e-07!113;UBERON:0004535!2.10e-07!110;UBERON:0000922!3.59e-07!612;UBERON:0002420!4.96e-07!9;UBERON:0007245!4.96e-07!9;UBERON:0010009!4.96e-07!9;UBERON:0010011!4.96e-07!9;UBERON:0000454!4.96e-07!9;UBERON:0002308!5.13e-07!9;UBERON:0000125!5.13e-07!9;UBERON:0002680!9.33e-07!9;UBERON:0001895!9.33e-07!9;UBERON:0010092!9.33e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.59e-22;32!UBERON:0001893;1.62e-22;34!UBERON:0003528;2.23e-22;34!UBERON:0002020;2.23e-22;34!UBERON:0002791;2.66e-22;32!UBERON:0000073;2.10e-21;53!UBERON:0002616;2.10e-21;53!UBERON:0002780;3.30e-21;41!UBERON:0001890;3.30e-21;41!UBERON:0000956;1.06e-19;25!UBERON:0000203;1.06e-19;25!UBERON:0002619;4.91e-18;22!UBERON:0001950;1.32e-16;20!UBERON:0000955;6.91e-16;68!UBERON:0001017;3.70e-14;75!UBERON:0001016;6.70e-14;83!UBERON:0004573;1.05e-10;33!UBERON:0004571;1.05e-10;33!UBERON:0001637;1.52e-10;42!UBERON:0003509;1.52e-10;42!UBERON:0004572;1.52e-10;42!UBERON:0004732;5.22e-10;13!UBERON:0004733;2.10e-09;12!UBERON:0002028;2.10e-09;12!UBERON:0010314;4.66e-08;132!UBERON:0002420;1.11e-07;9!UBERON:0007245;1.11e-07;9!UBERON:0010009;1.11e-07;9!UBERON:0010011;1.11e-07;9!UBERON:0000454;1.11e-07;9!UBERON:0000125;1.15e-07;9!UBERON:0002308;1.15e-07;9!UBERON:0002680;2.25e-07;9!UBERON:0001895;2.25e-07;9!UBERON:0011216;3.13e-07;132!UBERON:0007500;3.42e-07;56!UBERON:0001981;3.42e-07;56!UBERON:0004537;3.42e-07;56 | |||
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| ||
|short_description=p1@CEND1 | |||
}} | }} |
Latest revision as of 16:09, 24 September 2015
Short description: | p1@CEND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CEND1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000330106, ENST00000524587, NM_016564, uc001lrh.1_5end |
EntrezGene: | CEND1 |
HGNC: | 24153 |
UniProt: | Q8N111 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 5.51e-15 | 61 |
electrically active cell | 5.51e-15 | 61 |
muscle cell | 4.73e-14 | 55 |
smooth muscle cell | 1.17e-13 | 43 |
smooth muscle myoblast | 1.17e-13 | 43 |
muscle precursor cell | 1.26e-13 | 58 |
myoblast | 1.26e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.26e-13 | 58 |
vascular associated smooth muscle cell | 6.06e-11 | 32 |
fibroblast | 7.84e-09 | 76 |
mesodermal cell | 6.92e-07 | 121 |