FFCP PHASE1:Hg19::chr14:33403881..33403924,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:33403881..33403924,+ to FFCP PHASE1:Hg19::chr14:33403881..33403924,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64067 | |EntrezGene=64067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19311 | |HGNC=19311 | ||
|TSSclassifier=strong | |||
|UniProt=F8VR32,F8VS42 | |UniProt=F8VR32,F8VS42 | ||
|association_with_transcript=-214bp_to_ENST00000551492,ENST00000551634_5end | |||
|cluster_id=chr14:33403881..33403924,+ | |||
|coexpression_cluster_id=C1030 | |||
|description=CAGE_peak_1_at_NPAS3_5end | |||
|id=chr14:33403881..33403924,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.99e-10!25;CL:0000128!4.32e-07!7;CL:0000126!4.32e-07!7;CL:0000127!4.32e-07!7;CL:0002453!4.32e-07!7;CL:0000133!6.20e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.39e-10;25!CL:0000128;4.29e-09;7!CL:0000126;4.29e-09;7!CL:0000127;4.29e-09;7!CL:0002605;2.35e-07;3!CL:0000243;7.98e-07;15!CL:0000125;7.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.67e-10,25;CL:0000128,3.65e-09,7;CL:0000126,3.65e-09,7;CL:0000127,3.65e-09,7;CL:0002453,3.65e-09,7;CL:0002605,2.35e-07,3;CL:0000243,7.13e-07,15;CL:0000125,7.13e-07,15;CL:0000030,7.13e-07,15;CL:0000339,7.13e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.11e-15;82!UBERON:0006238;5.83e-07;10!CL:0000339;7.98e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.50e-56!82;UBERON:0005743!6.90e-55!86;UBERON:0000073!9.13e-54!94;UBERON:0001016!9.13e-54!94;UBERON:0001049!4.96e-51!57;UBERON:0005068!4.96e-51!57;UBERON:0006241!4.96e-51!57;UBERON:0007135!4.96e-51!57;UBERON:0000955!1.33e-46!69;UBERON:0006238!1.33e-46!69;UBERON:0002346!1.37e-43!90;UBERON:0002616!2.30e-43!59;UBERON:0003075!1.90e-42!86;UBERON:0007284!1.90e-42!86;UBERON:0002780!4.86e-39!41;UBERON:0001890!4.86e-39!41;UBERON:0006240!4.86e-39!41;UBERON:0003080!1.08e-37!42;UBERON:0001893!1.88e-35!34;UBERON:0002020!1.96e-35!34;UBERON:0003528!1.96e-35!34;UBERON:0002791!1.78e-34!33;UBERON:0000924!7.51e-34!173;UBERON:0006601!7.51e-34!173;UBERON:0000153!8.15e-34!129;UBERON:0007811!8.15e-34!129;UBERON:0001869!1.12e-33!32;UBERON:0003056!1.91e-33!61;UBERON:0000033!6.64e-33!123;UBERON:0004121!1.47e-32!169;UBERON:0007023!7.47e-32!115;UBERON:0000956!8.87e-27!25;UBERON:0000203!8.87e-27!25;UBERON:0002619!1.86e-23!22;UBERON:0001950!2.34e-21!20;UBERON:0003076!5.19e-14!15;UBERON:0003057!5.19e-14!15;UBERON:0000475!4.69e-13!365;UBERON:0004732!5.52e-12!13;UBERON:0004733!3.11e-11!12;UBERON:0002028!3.11e-11!12;UBERON:0007277!3.11e-11!12;UBERON:0000064!1.17e-10!219;UBERON:0002420!3.53e-10!9;UBERON:0007245!3.53e-10!9;UBERON:0010009!3.53e-10!9;UBERON:0010011!3.53e-10!9;UBERON:0000454!3.53e-10!9;UBERON:0002308!5.25e-10!9;UBERON:0000125!5.25e-10!9;UBERON:0001871!5.48e-09!7;UBERON:0002680!1.94e-08!9;UBERON:0001895!1.94e-08!9;UBERON:0010092!1.94e-08!9;UBERON:0000468!3.38e-08!659;UBERON:0009663!3.45e-08!7;UBERON:0000119!6.27e-08!312;UBERON:0000483!6.41e-08!309;UBERON:0000922!8.55e-08!612;UBERON:0000062!2.84e-07!511;UBERON:0000200!3.79e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.96e-52;32!UBERON:0003528;4.06e-52;34!UBERON:0002020;4.06e-52;34!UBERON:0002791;4.59e-52;32!UBERON:0001893;5.76e-52;34!UBERON:0002780;3.76e-48;41!UBERON:0001890;3.76e-48;41!UBERON:0000073;3.87e-46;53!UBERON:0002616;3.87e-46;53!UBERON:0000956;1.87e-45;25!UBERON:0000203;1.87e-45;25!UBERON:0002619;1.18e-39;22!UBERON:0001950;5.46e-36;20!UBERON:0000955;1.33e-35;68!UBERON:0001017;2.52e-34;75!UBERON:0001016;5.62e-30;83!UBERON:0004732;1.57e-17;13!UBERON:0002420;1.76e-16;9!UBERON:0007245;1.76e-16;9!UBERON:0010009;1.76e-16;9!UBERON:0010011;1.76e-16;9!UBERON:0000454;1.76e-16;9!UBERON:0004733;3.19e-16;12!UBERON:0002028;3.19e-16;12!UBERON:0000125;3.54e-16;9!UBERON:0002308;3.54e-16;9!UBERON:0009663;4.88e-13;7!UBERON:0001871;7.66e-13;6!UBERON:0002680;1.90e-11;9!UBERON:0001895;1.90e-11;9!UBERON:0000200;2.75e-11;6!UBERON:0002298;4.15e-11;6!UBERON:0000349;1.90e-10;5!UBERON:0011216;3.67e-10;132!UBERON:0001872;5.79e-10;5!UBERON:0007023;9.04e-10;114!UBERON:0002021;1.13e-09;5!UBERON:0000369;1.54e-08;4!UBERON:0002435;1.54e-08;4!UBERON:0000204;1.54e-08;4!UBERON:0001894;1.78e-08;7!UBERON:0010314;1.86e-07;132!UBERON:0002784;2.09e-07;4!UBERON:0002037;4.94e-07;6!UBERON:0005383;8.36e-07;3!UBERON:0005382;8.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.47e-89,81;UBERON:0001049,2.37e-88,56;UBERON:0005068,2.37e-88,56;UBERON:0006241,2.37e-88,56;UBERON:0007135,2.37e-88,56;UBERON:0001016,1.05e-83,89;UBERON:0000073,4.39e-83,53;UBERON:0002616,4.39e-83,53;UBERON:0000955,1.49e-79,68;UBERON:0006238,1.49e-79,68;UBERON:0003075,2.13e-68,82;UBERON:0007284,2.13e-68,82;UBERON:0002780,2.54e-67,41;UBERON:0001890,2.54e-67,41;UBERON:0003080,2.54e-67,41;UBERON:0006240,2.54e-67,41;UBERON:0002346,1.37e-66,86;UBERON:0001893,1.44e-60,34;UBERON:0003528,1.55e-60,34;UBERON:0002020,1.55e-60,34;UBERON:0001869,1.82e-57,32;UBERON:0002791,3.12e-57,32;UBERON:0003056,1.61e-54,61;UBERON:0010371,5.41e-50,104;UBERON:0000956,2.03e-45,25;UBERON:0000203,2.03e-45,25;UBERON:0004121,3.79e-43,171;UBERON:0000924,3.79e-43,171;UBERON:0006601,3.79e-43,171;UBERON:0010314,1.42e-41,132;UBERON:0002619,1.27e-39,22;UBERON:0001950,5.84e-36,20;UBERON:0011216,3.03e-30,223;UBERON:0007023,1.29e-29,114;UBERON:0003076,4.70e-21,15;UBERON:0003057,4.70e-21,15;UBERON:0004732,1.41e-17,13;UBERON:0002420,1.67e-16,9;UBERON:0007245,1.67e-16,9;UBERON:0010009,1.67e-16,9;UBERON:0010011,1.67e-16,9;UBERON:0000454,1.67e-16,9;UBERON:0004733,2.82e-16,12;UBERON:0002028,2.82e-16,12;UBERON:0007277,2.82e-16,12;UBERON:0000125,3.33e-16,9;UBERON:0002308,3.33e-16,9;UBERON:0000025,8.15e-15,192;UBERON:0009663,4.67e-13,7;UBERON:0001871,7.33e-13,6;UBERON:0002680,1.66e-11,9;UBERON:0001895,1.66e-11,9;UBERON:0010092,1.66e-11,9;UBERON:0000483,2.00e-11,306;UBERON:0000200,2.93e-11,6;UBERON:0000119,3.86e-11,309;UBERON:0002298,4.12e-11,6;UBERON:0004111,1.30e-10,240;UBERON:0000349,1.93e-10,5;UBERON:0001872,6.12e-10,5;UBERON:0002021,1.16e-09,5;UBERON:0000369,1.53e-08,4;UBERON:0002435,1.53e-08,4;UBERON:0000204,1.53e-08,4;UBERON:0010082,1.53e-08,4;UBERON:0001894,2.07e-08,7;UBERON:0006222,2.07e-08,7;UBERON:0000923,7.85e-08,560;UBERON:0010316,7.85e-08,560;UBERON:0005291,7.85e-08,560;UBERON:0006598,7.85e-08,560;UBERON:0010317,7.85e-08,560;UBERON:0002532,7.85e-08,560;UBERON:0002050,1.31e-07,564;UBERON:0002784,2.11e-07,4;UBERON:0000922,2.18e-07,592;UBERON:0005423,3.88e-07,581;UBERON:0002037,4.46e-07,6;UBERON:0006215,4.46e-07,6;UBERON:0005383,8.13e-07,3;UBERON:0005382,8.13e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.618831764800233,0.994192127183747,0,0,0,0,1.84681587115182,0.204000691244253,7.20945859399602,99.6101235216077,88.9683762973747,92.0227548229904,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74150969775797,0.221729397462564,2.81071314218003,5.76307932189936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0.448346041655403,0,0.323745888736263,0.280901613404497,0.204154171254893,0.245668634623536,0.309977343527296,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.487894824518382,0.265059536642971,0.232387885739037,1.14027160516907,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,2.08674728955138,0.234817388471643,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,59.7122366922789,52.0559415430487,10.8260433788877,19.5994030441188,13.3967137847164,0,0,0,0.613457458595699,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0,0,0,4.1389228517002,0,0,0,0,0,0,0.215714200818617,0,0,1.66435439510497,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0.355123450626254,0.657017248110473,0.519254429183621,0.697262270759755,0,0,0,0.574072240823034,5.46273504020151,11.4078241014699,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.725083469571143,0.681813019328807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,1.50149902548784,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,5.32141596105897,0,0,0,1.39973888097993,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.77487913158015,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,4.97578139173005,0,0,0,3.56357616999166,0,22.8653958986249,32.7759740236495,0,0,84.4501632511974,0.796991953004279,0.276283915531148,27.9645350118246,1.53403023753232,0,0,0,0,0,0.295930216910801,0,0,29.0799823828566,14.2862871169251,47.9073115202866,3.38556089410803,0,0,0,0,0,0,3.49925536059905,2.08349993919951,32.772431275112,21.8279553911988,16.7839909948792,14.1541452711968,15.0729285666309,13.1631238292384,0,0,4.92481654424301,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8049161016089,1.60515529459758,18.0383623208511,0,0,0,0.394584402849391,2.41981432097328,45.2987687213125,0.379119477770928,0.751617097072463,0,0,0,0,0,0,0,15.7939361884969,0,0,0.17472666824203,0,0,0,0,0.484945082442097,1.3238419003725,2.25980740780532,0,0,24.5012780349251,0,0,0.426905989478705,0,0,0,24.5380846942609,0,1.49103042678519,0,3.26170094576674,2.824276850433,12.035789681086,0,19.8138695274231,17.2500777403911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.3996469719907,35.0042753706749,0.964518890790115,0,0.415440338029185,0,0,26.6083058162148,0,0.394028536495991,0.629455057619977,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,2.39460383124975,0,0.681552087141687,13.9373872569755,0,0,22.8830832759944,15.2067492004093,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0.157054096250234,23.0377726791416,17.0836770862748,19.1542123980945,21.7895494362227,18.747009709728,24.4659827589051,0,0.124980407962107,0,0,0,0,0.434763085832475,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,1.5652351854352,0,0,0.406870733204662,0.181848659202559,0,0,0,0,1.03018711554838,0,0,0,0,0,0,0,0,0,0,0.657852148736121,0,0,0,0,0,0,22.2596082204287,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0,5.59869534029676,0.127894371303652,0,2.35898912783845,0.109209638192014,2.0367903594483,0.850299680406731,0.495743057036009,0,0.318004350653419,0,0,0.352675943690684,0,25.1136270127157,12.7526918693026,20.2735001002582,18.0502400531864,40.5835430916966,20.5397039818727,25.5131520098325,4.28308260777463,0,0,0,0,0,0,0,0.526472298444801,0,0,0,2.78412259767164,0,20.6665008932288,27.3377334514847,21.4954268361231,17.1856845625487,47.5868083845851,0,0,0,0,3.74991285114801,2.01770233331294,0,1.13831095675649,0.532214220975833,0,0,12.4384611347602,18.5479221447234,0,0.222462803784138,0.078493092850514,25.7669567462243,0,1.82631744101899,0,0,0.142953088353313,0,0,0.347716544605159,3.20684545892101,0,0,0,0,0,0,0.423387050190929,1.60374807980835,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.475680363110274,0.11294608203896,0,0,0.154348316215889,0.218559560503957,0,0.24514832175390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| ||
|short_description=p1@NPAS3 | |||
}} | }} |
Latest revision as of 18:09, 19 September 2015
Short description: | p1@NPAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPAS3_5end |
Coexpression cluster: | C1030_Astrocyte_anaplastic_Neural_parietal_hippocampus_occipital_spinal |
Association with transcript: | -214bp_to_ENST00000551492, ENST00000551634_5end |
EntrezGene: | NPAS3 |
HGNC: | 19311 |
UniProt: | F8VR32F8VS42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.67e-10 | 25 |
oligodendrocyte | 3.65e-09 | 7 |
macroglial cell | 3.65e-09 | 7 |
astrocyte | 3.65e-09 | 7 |
oligodendrocyte precursor cell | 3.65e-09 | 7 |
astrocyte of the cerebral cortex | 2.35e-07 | 3 |
glial cell (sensu Vertebrata) | 7.13e-07 | 15 |
glial cell | 7.13e-07 | 15 |
glioblast | 7.13e-07 | 15 |
glioblast (sensu Vertebrata) | 7.13e-07 | 15 |