FFCP PHASE1:Hg19::chr5:19988340..19988358,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:19988340..19988358,- to FFCP PHASE1:Hg19::chr5:19988340..19988358,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1016 | |EntrezGene=1016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1757 | |HGNC=1757 | ||
|TSSclassifier=strong | |||
|UniProt=B4DHG6,Q13634 | |UniProt=B4DHG6,Q13634 | ||
|association_with_transcript=0bp_to_NM_001167667,NM_004934_5end | |||
|cluster_id=chr5:19988340..19988358,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_CDH18_5end | |||
|id=chr5:19988340..19988358,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.42e-19;82!UBERON:0006215;4.55e-13;3!UBERON:0010122;6.84e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.16e-66!57;UBERON:0005068!6.16e-66!57;UBERON:0006241!6.16e-66!57;UBERON:0007135!6.16e-66!57;UBERON:0002616!1.21e-57!59;UBERON:0001017!2.10e-51!82;UBERON:0000955!1.35e-50!69;UBERON:0006238!1.35e-50!69;UBERON:0005743!7.55e-50!86;UBERON:0002780!6.61e-49!41;UBERON:0001890!6.61e-49!41;UBERON:0006240!6.61e-49!41;UBERON:0000073!1.02e-48!94;UBERON:0001016!1.02e-48!94;UBERON:0003075!1.97e-48!86;UBERON:0007284!1.97e-48!86;UBERON:0003080!1.89e-47!42;UBERON:0002346!3.57e-47!90;UBERON:0001869!4.50e-39!32;UBERON:0002020!7.79e-39!34;UBERON:0003528!7.79e-39!34;UBERON:0001893!1.27e-38!34;UBERON:0002791!5.22e-37!33;UBERON:0003056!1.02e-35!61;UBERON:0002619!1.80e-33!22;UBERON:0000033!8.83e-32!123;UBERON:0001950!2.43e-30!20;UBERON:0007023!1.74e-29!115;UBERON:0000153!1.93e-29!129;UBERON:0007811!1.93e-29!129;UBERON:0000956!1.09e-28!25;UBERON:0000203!1.09e-28!25;UBERON:0004121!2.63e-27!169;UBERON:0000924!3.47e-27!173;UBERON:0006601!3.47e-27!173;UBERON:0003076!7.89e-19!15;UBERON:0003057!7.89e-19!15;UBERON:0000025!4.10e-18!194;UBERON:0004733!4.49e-15!12;UBERON:0002028!4.49e-15!12;UBERON:0007277!4.49e-15!12;UBERON:0000475!8.98e-15!365;UBERON:0004732!1.12e-13!13;UBERON:0000483!1.89e-13!309;UBERON:0004111!2.65e-13!241;UBERON:0000119!4.11e-13!312;UBERON:0000477!3.97e-12!286;UBERON:0002420!7.90e-12!9;UBERON:0007245!7.90e-12!9;UBERON:0010009!7.90e-12!9;UBERON:0010011!7.90e-12!9;UBERON:0000454!7.90e-12!9;UBERON:0001894!1.14e-11!7;UBERON:0006222!1.14e-11!7;UBERON:0002308!1.82e-11!9;UBERON:0000125!1.82e-11!9;UBERON:0000200!2.55e-11!6;UBERON:0002680!5.00e-11!9;UBERON:0001895!5.00e-11!9;UBERON:0010092!5.00e-11!9;UBERON:0001871!1.35e-10!7;UBERON:0000064!8.36e-10!219;UBERON:0000349!1.65e-09!5;UBERON:0002021!2.97e-09!5;UBERON:0000481!4.30e-09!347;UBERON:0001872!6.62e-09!5;UBERON:0009663!1.02e-08!7;UBERON:0005174!4.81e-08!5;UBERON:0001137!4.81e-08!5;UBERON:0000369!8.38e-08!4;UBERON:0002435!8.38e-08!4;UBERON:0000204!8.38e-08!4;UBERON:0010082!8.38e-08!4;UBERON:0003296!1.31e-07!4;UBERON:0010133!1.31e-07!4;UBERON:0002298!3.06e-07!8;UBERON:0000062!4.05e-07!511;UBERON:0002037!7.05e-07!6;UBERON:0006215!7.05e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.23e-65;32!UBERON:0003528;2.19e-64;34!UBERON:0002020;2.19e-64;34!UBERON:0002619;1.73e-63;22!UBERON:0002791;6.71e-61;32!UBERON:0002780;7.04e-60;41!UBERON:0001890;7.04e-60;41!UBERON:0001893;2.05e-58;34!UBERON:0000073;3.14e-58;53!UBERON:0002616;3.14e-58;53!UBERON:0001950;1.84e-56;20!UBERON:0000956;1.48e-55;25!UBERON:0000203;1.48e-55;25!UBERON:0000955;6.11e-38;68!UBERON:0001017;8.29e-33;75!UBERON:0001016;4.67e-26;83!UBERON:0000200;7.91e-24;6!UBERON:0004733;1.21e-23;12!UBERON:0002028;1.21e-23;12!UBERON:0004732;1.07e-21;13!UBERON:0002298;8.51e-21;6!UBERON:0002420;3.66e-20;9!UBERON:0007245;3.66e-20;9!UBERON:0010009;3.66e-20;9!UBERON:0010011;3.66e-20;9!UBERON:0000454;3.66e-20;9!UBERON:0000349;1.25e-19;5!UBERON:0000125;2.37e-19;9!UBERON:0002308;2.37e-19;9!UBERON:0002021;3.01e-19;5!UBERON:0001894;1.07e-18;7!UBERON:0000369;8.75e-16;4!UBERON:0002435;8.75e-16;4!UBERON:0000204;8.75e-16;4!UBERON:0007023;1.27e-15;114!UBERON:0003296;1.70e-15;4!UBERON:0010133;1.70e-15;4!UBERON:0002784;4.84e-15;4!UBERON:0002680;6.48e-15;9!UBERON:0001895;6.48e-15;9!UBERON:0001871;5.13e-14;6!UBERON:0009663;2.00e-13;7!UBERON:0001870;4.29e-13;3!UBERON:0001872;1.34e-12;5!UBERON:0005383;3.36e-12;3!UBERON:0005382;3.36e-12;3!UBERON:0000988;2.10e-11;3!UBERON:0011216;2.19e-11;132!UBERON:0001896;3.98e-11;3!UBERON:0005290;3.98e-11;3!UBERON:0010314;1.06e-09;132!UBERON:0002702;2.76e-09;2!UBERON:0002771;3.95e-09;2!UBERON:0001876;4.81e-09;2!UBERON:0001873;6.84e-09;2!UBERON:0001954;1.03e-08;2!UBERON:0003022;1.03e-08;2!UBERON:0002421;1.03e-08;2!UBERON:0002600;1.03e-08;2!UBERON:0001905;1.34e-08;2!UBERON:0000007;1.34e-08;2!UBERON:0002757;1.34e-08;2!UBERON:0010134;1.34e-08;2!UBERON:0005408;1.34e-08;2!UBERON:0001899;1.34e-08;2!UBERON:0001897;3.84e-08;2!UBERON:0010225;3.84e-08;2!UBERON:0002148;5.65e-08;2!UBERON:0006331;5.65e-08;2!UBERON:0009662;5.65e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.33e-110,53;UBERON:0002616,1.33e-110,53;UBERON:0001049,2.76e-104,56;UBERON:0005068,2.76e-104,56;UBERON:0006241,2.76e-104,56;UBERON:0007135,2.76e-104,56;UBERON:0000955,1.26e-87,68;UBERON:0006238,1.26e-87,68;UBERON:0002780,1.13e-86,41;UBERON:0001890,1.13e-86,41;UBERON:0003080,1.13e-86,41;UBERON:0006240,1.13e-86,41;UBERON:0001017,3.05e-76,81;UBERON:0003075,5.14e-76,82;UBERON:0007284,5.14e-76,82;UBERON:0003528,3.98e-74,34;UBERON:0002020,3.98e-74,34;UBERON:0001869,1.02e-73,32;UBERON:0002346,4.50e-72,86;UBERON:0001016,3.72e-71,89;UBERON:0001893,4.07e-69,34;UBERON:0002791,9.27e-68,32;UBERON:0002619,1.63e-63,22;UBERON:0003056,8.79e-60,61;UBERON:0010371,4.75e-58,104;UBERON:0001950,2.01e-56,20;UBERON:0000956,1.41e-55,25;UBERON:0000203,1.41e-55,25;UBERON:0007023,2.83e-50,114;UBERON:0010314,2.86e-46,132;UBERON:0004121,1.15e-36,171;UBERON:0000924,1.15e-36,171;UBERON:0006601,1.15e-36,171;UBERON:0011216,2.87e-27,223;UBERON:0000025,4.31e-24,192;UBERON:0000200,7.78e-24,6;UBERON:0004733,1.00e-23,12;UBERON:0002028,1.00e-23,12;UBERON:0007277,1.00e-23,12;UBERON:0004732,8.99e-22,13;UBERON:0002298,7.80e-21,6;UBERON:0002420,3.26e-20,9;UBERON:0007245,3.26e-20,9;UBERON:0010009,3.26e-20,9;UBERON:0010011,3.26e-20,9;UBERON:0000454,3.26e-20,9;UBERON:0000349,1.08e-19,5;UBERON:0000125,1.79e-19,9;UBERON:0002308,1.79e-19,9;UBERON:0002021,4.09e-19,5;UBERON:0003076,1.20e-18,15;UBERON:0003057,1.20e-18,15;UBERON:0004111,1.37e-18,240;UBERON:0001894,1.59e-18,7;UBERON:0006222,1.59e-18,7;UBERON:0000369,8.28e-16,4;UBERON:0002435,8.28e-16,4;UBERON:0000204,8.28e-16,4;UBERON:0010082,8.28e-16,4;UBERON:0003296,2.30e-15,4;UBERON:0010133,2.30e-15,4;UBERON:0002680,5.13e-15,9;UBERON:0001895,5.13e-15,9;UBERON:0010092,5.13e-15,9;UBERON:0002784,7.02e-15,4;UBERON:0001871,4.25e-14,6;UBERON:0009663,1.90e-13,7;UBERON:0000483,2.03e-13,306;UBERON:0000119,3.40e-13,309;UBERON:0001870,4.83e-13,3;UBERON:0001872,1.31e-12,5;UBERON:0005383,2.89e-12,3;UBERON:0005382,2.89e-12,3;UBERON:0000988,1.75e-11,3;UBERON:0001896,4.36e-11,3;UBERON:0005290,4.36e-11,3;UBERON:0010096,4.36e-11,3;UBERON:0002702,3.12e-09,2;UBERON:0002771,3.38e-09,2;UBERON:0001876,4.45e-09,2;UBERON:0001873,6.33e-09,2;UBERON:0010122,6.33e-09,2;UBERON:0005253,7.40e-09,2;UBERON:0001954,8.64e-09,2;UBERON:0003022,8.64e-09,2;UBERON:0002421,8.64e-09,2;UBERON:0002600,8.64e-09,2;UBERON:0000007,1.48e-08,2;UBERON:0001905,1.66e-08,2;UBERON:0002757,1.66e-08,2;UBERON:0010134,1.66e-08,2;UBERON:0005408,1.66e-08,2;UBERON:0001899,1.66e-08,2;UBERON:0002148,4.22e-08,2;UBERON:0006331,4.22e-08,2;UBERON:0009662,4.22e-08,2;UBERON:0001897,4.54e-08,2;UBERON:0010225,4.54e-08,2;UBERON:0002037,9.45e-07,6;UBERON:0006215,9.45e-07,6 | |||
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| ||
|short_description=p5@CDH18 | |||
}} | }} |
Latest revision as of 12:46, 17 September 2015
Short description: | p5@CDH18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CDH18_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_001167667, NM_004934_5end |
EntrezGene: | CDH18 |
HGNC: | 1757 |
UniProt: | B4DHG6Q13634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data