FFCP PHASE1:Hg19::chr9:103791003..103791051,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:103791003..103791051,+ to FFCP PHASE1:Hg19::chr9:103791003..103791051,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54886 | |EntrezGene=54886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q8TBJ4 | |UniProt=Q8TBJ4 | ||
|association_with_transcript=0bp_to_NM_207299,uc004bbb.2,uc011lvi.1_5end | |||
|cluster_id=chr9:103791003..103791051,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_LPPR1_5end | |||
|id=chr9:103791003..103791051,+ | |||
|ontology_enrichment_celltype=CL:0000047!5.15e-10!8;CL:0000540!9.00e-08!6;CL:0000031!9.00e-08!6;CL:0000404!9.00e-08!6;CL:0002319!7.27e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;7.22e-12;6!CL:0000404;7.22e-12;6!CL:0002319;4.08e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.40e-15,8;CL:0000540,7.23e-12,6;CL:0000031,7.23e-12,6;CL:0000404,7.23e-12,6;CL:0002319,4.39e-11,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.03e-16;82!CL:0000031;7.22e-12;6!UBERON:0006241;1.80e-07;3!UBERON:0003057;1.80e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.20e-58!86;UBERON:0000073!7.40e-56!94;UBERON:0001016!7.40e-56!94;UBERON:0001017!3.52e-55!82;UBERON:0001049!1.85e-53!57;UBERON:0005068!1.85e-53!57;UBERON:0006241!1.85e-53!57;UBERON:0007135!1.85e-53!57;UBERON:0002616!6.89e-44!59;UBERON:0003080!1.43e-42!42;UBERON:0002780!7.51e-42!41;UBERON:0001890!7.51e-42!41;UBERON:0006240!7.51e-42!41;UBERON:0003075!8.87e-42!86;UBERON:0007284!8.87e-42!86;UBERON:0000955!1.57e-41!69;UBERON:0006238!1.57e-41!69;UBERON:0002346!2.07e-40!90;UBERON:0004121!2.41e-37!169;UBERON:0000924!7.17e-37!173;UBERON:0006601!7.17e-37!173;UBERON:0002020!1.14e-36!34;UBERON:0003528!1.14e-36!34;UBERON:0001893!1.35e-36!34;UBERON:0002791!1.26e-35!33;UBERON:0007023!3.98e-35!115;UBERON:0003056!2.22e-34!61;UBERON:0001869!2.42e-34!32;UBERON:0000033!4.63e-30!123;UBERON:0000153!1.81e-29!129;UBERON:0007811!1.81e-29!129;UBERON:0000956!4.74e-26!25;UBERON:0000203!4.74e-26!25;UBERON:0002619!2.17e-23!22;UBERON:0001950!4.84e-21!20;UBERON:0000025!5.33e-21!194;UBERON:0004111!1.42e-18!241;UBERON:0000483!2.97e-14!309;UBERON:0000119!7.85e-14!312;UBERON:0000477!1.02e-13!286;UBERON:0002420!4.80e-12!9;UBERON:0007245!4.80e-12!9;UBERON:0010009!4.80e-12!9;UBERON:0010011!4.80e-12!9;UBERON:0000454!4.80e-12!9;UBERON:0002308!4.98e-12!9;UBERON:0000125!4.98e-12!9;UBERON:0003076!8.45e-12!15;UBERON:0003057!8.45e-12!15;UBERON:0000475!1.58e-11!365;UBERON:0000922!1.94e-11!612;UBERON:0009663!5.77e-10!7;UBERON:0004732!1.23e-09!13;UBERON:0002298!2.29e-09!8;UBERON:0002050!8.95e-09!605;UBERON:0005423!8.95e-09!605;UBERON:0000468!1.17e-08!659;UBERON:0004733!1.55e-08!12;UBERON:0002028!1.55e-08!12;UBERON:0007277!1.55e-08!12;UBERON:0000923!1.93e-08!604;UBERON:0005291!1.93e-08!604;UBERON:0006598!1.93e-08!604;UBERON:0002532!1.93e-08!604;UBERON:0001871!8.59e-08!7;UBERON:0000200!9.78e-08!6;UBERON:0000481!1.96e-07!347;UBERON:0000349!3.18e-07!5;UBERON:0000467!3.30e-07!625;UBERON:0000480!3.92e-07!626;UBERON:0002021!8.84e-07!5;UBERON:0000064!9.06e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.11e-51;34!UBERON:0003528;1.34e-51;34!UBERON:0002020;1.34e-51;34!UBERON:0002791;2.36e-51;32!UBERON:0001869;5.19e-51;32!UBERON:0002780;5.30e-47;41!UBERON:0001890;5.30e-47;41!UBERON:0000073;4.04e-43;53!UBERON:0002616;4.04e-43;53!UBERON:0000956;1.08e-42;25!UBERON:0000203;1.08e-42;25!UBERON:0002619;2.85e-38;22!UBERON:0001950;2.33e-34;20!UBERON:0001017;1.93e-31;75!UBERON:0000955;3.57e-31;68!UBERON:0001016;9.46e-27;83!UBERON:0002420;6.26e-19;9!UBERON:0007245;6.26e-19;9!UBERON:0010009;6.26e-19;9!UBERON:0010011;6.26e-19;9!UBERON:0000454;6.26e-19;9!UBERON:0000125;6.39e-19;9!UBERON:0002308;6.39e-19;9!UBERON:0009663;1.69e-15;7!UBERON:0004732;3.25e-13;13!UBERON:0000200;7.50e-12;6!UBERON:0002298;1.45e-11;6!UBERON:0004733;1.86e-11;12!UBERON:0002028;1.86e-11;12!UBERON:0007023;3.37e-11;114!UBERON:0000349;6.11e-11;5!UBERON:0001871;1.49e-10;6!UBERON:0011216;1.69e-10;132!UBERON:0002021;2.92e-10;5!UBERON:0001872;3.85e-10;5!UBERON:0000369;8.62e-10;4!UBERON:0002435;8.62e-10;4!UBERON:0000204;8.62e-10;4!UBERON:0002784;2.26e-09;4!UBERON:0001894;7.43e-08;7!UBERON:0005383;7.50e-08;3!UBERON:0005382;7.50e-08;3!UBERON:0002240;1.80e-07;3!UBERON:0005174;1.80e-07;3!UBERON:0001137;1.80e-07;3!UBERON:0002680;4.06e-07;9!UBERON:0001895;4.06e-07;9!UBERON:0001870;9.19e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.62e-87,81;UBERON:0001016,4.36e-83,89;UBERON:0001049,2.44e-82,56;UBERON:0005068,2.44e-82,56;UBERON:0006241,2.44e-82,56;UBERON:0007135,2.44e-82,56;UBERON:0000073,3.14e-76,53;UBERON:0002616,3.14e-76,53;UBERON:0000955,7.71e-67,68;UBERON:0006238,7.71e-67,68;UBERON:0002780,2.53e-66,41;UBERON:0001890,2.53e-66,41;UBERON:0003080,2.53e-66,41;UBERON:0006240,2.53e-66,41;UBERON:0003528,2.10e-60,34;UBERON:0002020,2.10e-60,34;UBERON:0001893,2.82e-60,34;UBERON:0002791,8.42e-57,32;UBERON:0001869,1.63e-56,32;UBERON:0003075,3.31e-56,82;UBERON:0007284,3.31e-56,82;UBERON:0002346,5.39e-55,86;UBERON:0010371,3.15e-48,104;UBERON:0004121,9.58e-46,171;UBERON:0000924,9.58e-46,171;UBERON:0006601,9.58e-46,171;UBERON:0003056,1.30e-45,61;UBERON:0000956,1.17e-42,25;UBERON:0000203,1.17e-42,25;UBERON:0002619,3.21e-38,22;UBERON:0011216,5.92e-38,223;UBERON:0001950,2.67e-34,20;UBERON:0007023,6.45e-34,114;UBERON:0010314,5.04e-32,132;UBERON:0000025,9.86e-25,192;UBERON:0002420,5.96e-19,9;UBERON:0007245,5.96e-19,9;UBERON:0010009,5.96e-19,9;UBERON:0010011,5.96e-19,9;UBERON:0000454,5.96e-19,9;UBERON:0000125,6.34e-19,9;UBERON:0002308,6.34e-19,9;UBERON:0004111,9.73e-19,240;UBERON:0003076,1.04e-16,15;UBERON:0003057,1.04e-16,15;UBERON:0009663,1.69e-15,7;UBERON:0000483,1.09e-13,306;UBERON:0000119,2.20e-13,309;UBERON:0004732,3.26e-13,13;UBERON:0000200,8.29e-12,6;UBERON:0002298,1.37e-11,6;UBERON:0004733,1.87e-11,12;UBERON:0002028,1.87e-11,12;UBERON:0007277,1.87e-11,12;UBERON:0000349,5.82e-11,5;UBERON:0000922,9.04e-11,592;UBERON:0001871,1.51e-10,6;UBERON:0000923,2.22e-10,560;UBERON:0010316,2.22e-10,560;UBERON:0005291,2.22e-10,560;UBERON:0006598,2.22e-10,560;UBERON:0010317,2.22e-10,560;UBERON:0002532,2.22e-10,560;UBERON:0002021,3.14e-10,5;UBERON:0002050,3.83e-10,564;UBERON:0001872,4.21e-10,5;UBERON:0000369,8.82e-10,4;UBERON:0002435,8.82e-10,4;UBERON:0000204,8.82e-10,4;UBERON:0010082,8.82e-10,4;UBERON:0002784,2.29e-09,4;UBERON:0005423,3.55e-09,581;UBERON:0001894,7.38e-08,7;UBERON:0006222,7.38e-08,7;UBERON:0005383,7.51e-08,3;UBERON:0005382,7.51e-08,3;UBERON:0002240,1.81e-07,3;UBERON:0005174,1.81e-07,3;UBERON:0001137,1.81e-07,3;UBERON:0002680,4.21e-07,9;UBERON:0001895,4.21e-07,9;UBERON:0010092,4.21e-07,9;UBERON:0001870,9.11e-07,3 | |||
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| ||
|short_description=p1@LPPR1 | |||
}} | }} |
Latest revision as of 21:20, 19 September 2015
Short description: | p1@LPPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPPR1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_NM_207299, uc004bbb.2, uc011lvi.1_5end |
EntrezGene: | LPPR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.40e-15 | 8 |
neuron | 7.23e-12 | 6 |
neuroblast | 7.23e-12 | 6 |
electrically signaling cell | 7.23e-12 | 6 |
neural cell | 4.39e-11 | 25 |