FFCP PHASE1:Hg19::chrX:50557014..50557060,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002139!5.90e-12!24;CL:0000071!1.54e-10!18;CL:0002546!1.54e-10!18;CL:0000115!1.40e-08!35;CL:0002078!7.88e-08!44 | |ontology_enrichment_celltype=CL:0002139!5.90e-12!24;CL:0000071!1.54e-10!18;CL:0002546!1.54e-10!18;CL:0000115!1.40e-08!35;CL:0002078!7.88e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0000071;3.41e-21;18!CL:0002139;1.72e-19;24!CL:0000115;1.17e-14;36!CL:1000413;1.98e-13;9!CL:0002078;1.68e-09;45!CL:0002544;1.73e-08;6!CL:0002543;5.63e-08;6!CL:0000213;4.49e-07;58!CL:0000215;4.49e-07;58 | |ontology_enrichment_celltype_v019=CL:0000071;3.41e-21;18!CL:0002139;1.72e-19;24!CL:0000115;1.17e-14;36!CL:1000413;1.98e-13;9!CL:0002078;1.68e-09;45!CL:0002544;1.73e-08;6!CL:0002543;5.63e-08;6!CL:0000213;4.49e-07;58!CL:0000215;4.49e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.02e-21,18;CL:0002546,1.02e-21,18;CL:0002139,7.18e-20,24;CL:0000115,7.41e-17,36;CL:0002078,6.78e-14,45;CL:1000413,1.65e-13,9;CL:0000213,1.55e-09,58;CL:0000215,1.55e-09,58;CL:0002544,1.63e-08,6;CL:0002543,2.88e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.41e-21;18!UBERON:0006601;2.58e-09;82!UBERON:0006241;8.91e-08;3!UBERON:0003057;8.91e-08;3 | |ontology_enrichment_development_v019=CL:0002546;3.41e-21;18!UBERON:0006601;2.58e-09;82!UBERON:0006241;8.91e-08;3!UBERON:0003057;8.91e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.84e-34!57;UBERON:0005068!7.84e-34!57;UBERON:0006241!7.84e-34!57;UBERON:0007135!7.84e-34!57;UBERON:0002616!4.10e-30!59;UBERON:0007023!6.62e-29!115;UBERON:0005743!2.01e-27!86;UBERON:0001017!4.97e-27!82;UBERON:0000025!7.24e-27!194;UBERON:0000073!2.48e-26!94;UBERON:0001016!2.48e-26!94;UBERON:0000955!2.90e-26!69;UBERON:0006238!2.90e-26!69;UBERON:0003075!4.73e-26!86;UBERON:0007284!4.73e-26!86;UBERON:0002346!1.73e-24!90;UBERON:0003080!3.20e-23!42;UBERON:0002780!1.01e-22!41;UBERON:0001890!1.01e-22!41;UBERON:0006240!1.01e-22!41;UBERON:0004111!3.51e-22!241;UBERON:0000477!5.41e-19!286;UBERON:0001893!1.92e-18!34;UBERON:0002020!2.05e-18!34;UBERON:0003528!2.05e-18!34;UBERON:0002791!1.31e-17!33;UBERON:0000153!2.45e-17!129;UBERON:0007811!2.45e-17!129;UBERON:0000033!5.70e-17!123;UBERON:0001869!1.04e-16!32;UBERON:0003056!2.24e-16!61;UBERON:0000483!9.58e-16!309;UBERON:0000119!1.26e-15!312;UBERON:0004121!1.13e-13!169;UBERON:0000924!3.92e-13!173;UBERON:0006601!3.92e-13!173;UBERON:0000468!4.33e-13!659;UBERON:0000956!6.91e-13!25;UBERON:0000203!6.91e-13!25;UBERON:0003076!9.18e-12!15;UBERON:0003057!9.18e-12!15;UBERON:0002619!1.48e-11!22;UBERON:0000467!5.45e-11!625;UBERON:0000480!7.36e-11!626;UBERON:0000922!8.05e-11!612;UBERON:0001986!1.54e-10!18;UBERON:0004638!1.54e-10!18;UBERON:0004852!1.54e-10!18;UBERON:0004732!3.61e-10!13;UBERON:0000475!3.96e-10!365;UBERON:0001950!4.64e-10!20;UBERON:0004733!2.90e-09!12;UBERON:0002028!2.90e-09!12;UBERON:0007277!2.90e-09!12;UBERON:0002050!3.33e-09!605;UBERON:0005423!3.33e-09!605;UBERON:0000481!3.98e-09!347;UBERON:0000923!6.50e-09!604;UBERON:0005291!6.50e-09!604;UBERON:0006598!6.50e-09!604;UBERON:0002532!6.50e-09!604;UBERON:0002298!3.89e-08!8;UBERON:0004872!1.23e-07!84;UBERON:0000487!1.82e-07!22;UBERON:0000064!3.53e-07!219;UBERON:0002308!4.18e-07!9;UBERON:0000125!4.18e-07!9;UBERON:0002049!4.50e-07!79;UBERON:0007798!4.50e-07!79;UBERON:0000055!7.36e-07!69;UBERON:0002680!8.66e-07!9;UBERON:0001895!8.66e-07!9;UBERON:0010092!8.66e-07!9;UBERON:0002420!8.96e-07!9;UBERON:0007245!8.96e-07!9;UBERON:0010009!8.96e-07!9;UBERON:0010011!8.96e-07!9;UBERON:0000454!8.96e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!7.84e-34!57;UBERON:0005068!7.84e-34!57;UBERON:0006241!7.84e-34!57;UBERON:0007135!7.84e-34!57;UBERON:0002616!4.10e-30!59;UBERON:0007023!6.62e-29!115;UBERON:0005743!2.01e-27!86;UBERON:0001017!4.97e-27!82;UBERON:0000025!7.24e-27!194;UBERON:0000073!2.48e-26!94;UBERON:0001016!2.48e-26!94;UBERON:0000955!2.90e-26!69;UBERON:0006238!2.90e-26!69;UBERON:0003075!4.73e-26!86;UBERON:0007284!4.73e-26!86;UBERON:0002346!1.73e-24!90;UBERON:0003080!3.20e-23!42;UBERON:0002780!1.01e-22!41;UBERON:0001890!1.01e-22!41;UBERON:0006240!1.01e-22!41;UBERON:0004111!3.51e-22!241;UBERON:0000477!5.41e-19!286;UBERON:0001893!1.92e-18!34;UBERON:0002020!2.05e-18!34;UBERON:0003528!2.05e-18!34;UBERON:0002791!1.31e-17!33;UBERON:0000153!2.45e-17!129;UBERON:0007811!2.45e-17!129;UBERON:0000033!5.70e-17!123;UBERON:0001869!1.04e-16!32;UBERON:0003056!2.24e-16!61;UBERON:0000483!9.58e-16!309;UBERON:0000119!1.26e-15!312;UBERON:0004121!1.13e-13!169;UBERON:0000924!3.92e-13!173;UBERON:0006601!3.92e-13!173;UBERON:0000468!4.33e-13!659;UBERON:0000956!6.91e-13!25;UBERON:0000203!6.91e-13!25;UBERON:0003076!9.18e-12!15;UBERON:0003057!9.18e-12!15;UBERON:0002619!1.48e-11!22;UBERON:0000467!5.45e-11!625;UBERON:0000480!7.36e-11!626;UBERON:0000922!8.05e-11!612;UBERON:0001986!1.54e-10!18;UBERON:0004638!1.54e-10!18;UBERON:0004852!1.54e-10!18;UBERON:0004732!3.61e-10!13;UBERON:0000475!3.96e-10!365;UBERON:0001950!4.64e-10!20;UBERON:0004733!2.90e-09!12;UBERON:0002028!2.90e-09!12;UBERON:0007277!2.90e-09!12;UBERON:0002050!3.33e-09!605;UBERON:0005423!3.33e-09!605;UBERON:0000481!3.98e-09!347;UBERON:0000923!6.50e-09!604;UBERON:0005291!6.50e-09!604;UBERON:0006598!6.50e-09!604;UBERON:0002532!6.50e-09!604;UBERON:0002298!3.89e-08!8;UBERON:0004872!1.23e-07!84;UBERON:0000487!1.82e-07!22;UBERON:0000064!3.53e-07!219;UBERON:0002308!4.18e-07!9;UBERON:0000125!4.18e-07!9;UBERON:0002049!4.50e-07!79;UBERON:0007798!4.50e-07!79;UBERON:0000055!7.36e-07!69;UBERON:0002680!8.66e-07!9;UBERON:0001895!8.66e-07!9;UBERON:0010092!8.66e-07!9;UBERON:0002420!8.96e-07!9;UBERON:0007245!8.96e-07!9;UBERON:0010009!8.96e-07!9;UBERON:0010011!8.96e-07!9;UBERON:0000454!8.96e-07!9 | ||
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| ||
|short_description=p4@SHROOM4 | |short_description=p4@SHROOM4 | ||
}} | }} |
Revision as of 18:03, 19 November 2012
Short description: | p4@SHROOM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SHROOM4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000376020, NM_020717, NR_027121, uc004dpd.3, uc004dpe.2_5end |
EntrezGene: | SHROOM4 |
HGNC: | 29215 |
UniProt: | Q9ULL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.02e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.02e-21 | 18 |
endothelial cell of vascular tree | 7.18e-20 | 24 |
endothelial cell | 7.41e-17 | 36 |
meso-epithelial cell | 6.78e-14 | 45 |
endothelial cell of artery | 1.65e-13 | 9 |
lining cell | 1.55e-09 | 58 |
barrier cell | 1.55e-09 | 58 |
aortic endothelial cell | 1.63e-08 | 6 |
vein endothelial cell | 2.88e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.