FFCP PHASE1:Hg19::chr19:55795460..55795484,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84446 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18994 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TDC3 | |||
|association_with_transcript=-49bp_to_ENST00000309383,NM_032430,uc002qkg.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_BRSK1_5end | |||
|id=chr19:55795460..55795484,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.51e-13!180;CL:0000133!1.19e-11!59;CL:0000333!8.07e-09!41;CL:0000221!1.82e-07!71;CL:0000393!2.18e-07!60;CL:0000211!2.18e-07!60;CL:0002319!4.31e-07!25;CL:0000359!8.99e-07!32 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.13e-08,8;CL:0000133,2.04e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.79e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.77e-40!94;UBERON:0001016!3.77e-40!94;UBERON:0005743!1.54e-39!86;UBERON:0001017!3.63e-39!82;UBERON:0001049!1.71e-34!57;UBERON:0005068!1.71e-34!57;UBERON:0006241!1.71e-34!57;UBERON:0007135!1.71e-34!57;UBERON:0002346!7.76e-33!90;UBERON:0003075!4.43e-32!86;UBERON:0007284!4.43e-32!86;UBERON:0000955!9.85e-32!69;UBERON:0006238!9.85e-32!69;UBERON:0002780!1.23e-28!41;UBERON:0001890!1.23e-28!41;UBERON:0006240!1.23e-28!41;UBERON:0002616!3.87e-28!59;UBERON:0000924!1.31e-27!173;UBERON:0006601!1.31e-27!173;UBERON:0003080!2.00e-27!42;UBERON:0004121!1.09e-26!169;UBERON:0001893!5.61e-26!34;UBERON:0002020!8.29e-26!34;UBERON:0003528!8.29e-26!34;UBERON:0002791!3.81e-25!33;UBERON:0001869!1.90e-24!32;UBERON:0003056!8.21e-24!61;UBERON:0000033!4.87e-21!123;UBERON:0000153!1.34e-19!129;UBERON:0007811!1.34e-19!129;UBERON:0000956!2.57e-19!25;UBERON:0000203!2.57e-19!25;UBERON:0002619!8.96e-19!22;UBERON:0001950!2.88e-17!20;UBERON:0000025!2.15e-15!194;UBERON:0000483!1.72e-14!309;UBERON:0000119!2.07e-14!312;UBERON:0000475!2.07e-14!365;UBERON:0007023!1.29e-13!115;UBERON:0000481!7.37e-12!347;UBERON:0004111!1.59e-10!241;UBERON:0000922!5.98e-09!612;UBERON:0000477!7.84e-09!286;UBERON:0003076!3.16e-08!15;UBERON:0003057!3.16e-08!15;UBERON:0002420!5.43e-08!9;UBERON:0007245!5.43e-08!9;UBERON:0010009!5.43e-08!9;UBERON:0010011!5.43e-08!9;UBERON:0000454!5.43e-08!9;UBERON:0002308!6.41e-08!9;UBERON:0000125!6.41e-08!9;UBERON:0001871!1.55e-07!7;UBERON:0000468!1.56e-07!659;UBERON:0002050!2.31e-07!605;UBERON:0005423!2.31e-07!605;UBERON:0000923!3.42e-07!604;UBERON:0005291!3.42e-07!604;UBERON:0006598!3.42e-07!604;UBERON:0002532!3.42e-07!604;UBERON:0004732!6.78e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.97e-49;34!UBERON:0003528;5.57e-49;34!UBERON:0002020;5.57e-49;34!UBERON:0001869;7.64e-49;32!UBERON:0002791;1.15e-48;32!UBERON:0002780;1.99e-45;41!UBERON:0001890;1.99e-45;41!UBERON:0002619;3.27e-44;22!UBERON:0000956;2.01e-41;25!UBERON:0000203;2.01e-41;25!UBERON:0001950;1.81e-40;20!UBERON:0000073;1.29e-38;53!UBERON:0002616;1.29e-38;53!UBERON:0000955;5.33e-28;68!UBERON:0001017;1.50e-27;75!UBERON:0001016;3.01e-26;83!UBERON:0002420;1.67e-17;9!UBERON:0007245;1.67e-17;9!UBERON:0010009;1.67e-17;9!UBERON:0010011;1.67e-17;9!UBERON:0000454;1.67e-17;9!UBERON:0000125;2.26e-17;9!UBERON:0002308;2.26e-17;9!UBERON:0001871;2.01e-14;6!UBERON:0009663;7.58e-14;7!UBERON:0000200;1.82e-13;6!UBERON:0004732;4.02e-11;13!UBERON:0000349;5.74e-11;5!UBERON:0001872;9.96e-11;5!UBERON:0002021;1.18e-10;5!UBERON:0004733;7.11e-10;12!UBERON:0002028;7.11e-10;12!UBERON:0007023;2.47e-09;114!UBERON:0011216;7.38e-09;132!UBERON:0002298;8.13e-09;6!UBERON:0000369;1.20e-08;4!UBERON:0002435;1.20e-08;4!UBERON:0000204;1.20e-08;4!UBERON:0002784;2.90e-08;4!UBERON:0010314;6.70e-08;132!UBERON:0002680;8.71e-08;9!UBERON:0001895;8.71e-08;9!UBERON:0001870;1.66e-07;3!UBERON:0000988;3.73e-07;3!UBERON:0001894;4.89e-07;7 | |||
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| |||
|short_description=p2@BRSK1 | |||
}} |
Revision as of 01:11, 21 January 2014
Short description: | p2@BRSK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BRSK1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -49bp_to_ENST00000309383, NM_032430, uc002qkg.2_5end |
EntrezGene: | BRSK1 |
HGNC: | 18994 |
UniProt: | Q8TDC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.13e-08 | 8 |
neurectodermal cell | 2.04e-07 | 59 |