FFCP PHASE1:Hg19::chr14:33403881..33403924,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64067|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19311|TSSclassifier=W|UniProt=F8VR32,F8VS42|association_with_transcript=-214bp_to_ENST00000551492,ENST00000551634_5end|coexpression_cluster_id=C1030|description=CAGE_peak_1_at_NPAS3_5end|id=chr14:33403881..33403924,+|ontology_enrichment_celltype=CL:0002319!5.99e-10!25;CL:0000128!4.32e-07!7;CL:0000126!4.32e-07!7;CL:0000127!4.32e-07!7;CL:0002453!4.32e-07!7;CL:0000133!6.20e-07!59|ontology_enrichment_celltype_v019=CL:0002319;6.39e-10;25!CL:0000128;4.29e-09;7!CL:0000126;4.29e-09;7!CL:0000127;4.29e-09;7!CL:0002605;2.35e-07;3!CL:0000243;7.98e-07;15!CL:0000125;7.98e-07;15|ontology_enrichment_celltype_v019_2=CL:0002319,5.67e-10,25;CL:0000128,3.65e-09,7;CL:0000126,3.65e-09,7;CL:0000127,3.65e-09,7;CL:0002453,3.65e-09,7;CL:0002605,2.35e-07,3;CL:0000243,7.13e-07,15;CL:0000125,7.13e-07,15;CL:0000030,7.13e-07,15;CL:0000339,7.13e-07,15|ontology_enrichment_development_v019=UBERON:0006601;2.11e-15;82!UBERON:0006238;5.83e-07;10!CL:0000339;7.98e-07;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.50e-56!82;UBERON:0005743!6.90e-55!86;UBERON:0000073!9.13e-54!94;UBERON:0001016!9.13e-54!94;UBERON:0001049!4.96e-51!57;UBERON:0005068!4.96e-51!57;UBERON:0006241!4.96e-51!57;UBERON:0007135!4.96e-51!57;UBERON:0000955!1.33e-46!69;UBERON:0006238!1.33e-46!69;UBERON:0002346!1.37e-43!90;UBERON:0002616!2.30e-43!59;UBERON:0003075!1.90e-42!86;UBERON:0007284!1.90e-42!86;UBERON:0002780!4.86e-39!41;UBERON:0001890!4.86e-39!41;UBERON:0006240!4.86e-39!41;UBERON:0003080!1.08e-37!42;UBERON:0001893!1.88e-35!34;UBERON:0002020!1.96e-35!34;UBERON:0003528!1.96e-35!34;UBERON:0002791!1.78e-34!33;UBERON:0000924!7.51e-34!173;UBERON:0006601!7.51e-34!173;UBERON:0000153!8.15e-34!129;UBERON:0007811!8.15e-34!129;UBERON:0001869!1.12e-33!32;UBERON:0003056!1.91e-33!61;UBERON:0000033!6.64e-33!123;UBERON:0004121!1.47e-32!169;UBERON:0007023!7.47e-32!115;UBERON:0000956!8.87e-27!25;UBERON:0000203!8.87e-27!25;UBERON:0002619!1.86e-23!22;UBERON:0001950!2.34e-21!20;UBERON:0003076!5.19e-14!15;UBERON:0003057!5.19e-14!15;UBERON:0000475!4.69e-13!365;UBERON:0004732!5.52e-12!13;UBERON:0004733!3.11e-11!12;UBERON:0002028!3.11e-11!12;UBERON:0007277!3.11e-11!12;UBERON:0000064!1.17e-10!219;UBERON:0002420!3.53e-10!9;UBERON:0007245!3.53e-10!9;UBERON:0010009!3.53e-10!9;UBERON:0010011!3.53e-10!9;UBERON:0000454!3.53e-10!9;UBERON:0002308!5.25e-10!9;UBERON:0000125!5.25e-10!9;UBERON:0001871!5.48e-09!7;UBERON:0002680!1.94e-08!9;UBERON:0001895!1.94e-08!9;UBERON:0010092!1.94e-08!9;UBERON:0000468!3.38e-08!659;UBERON:0009663!3.45e-08!7;UBERON:0000119!6.27e-08!312;UBERON:0000483!6.41e-08!309;UBERON:0000922!8.55e-08!612;UBERON:0000062!2.84e-07!511;UBERON:0000200!3.79e-07!6|ontology_enrichment_uberon_v019=UBERON:0001869;2.96e-52;32!UBERON:0003528;4.06e-52;34!UBERON:0002020;4.06e-52;34!UBERON:0002791;4.59e-52;32!UBERON:0001893;5.76e-52;34!UBERON:0002780;3.76e-48;41!UBERON:0001890;3.76e-48;41!UBERON:0000073;3.87e-46;53!UBERON:0002616;3.87e-46;53!UBERON:0000956;1.87e-45;25!UBERON:0000203;1.87e-45;25!UBERON:0002619;1.18e-39;22!UBERON:0001950;5.46e-36;20!UBERON:0000955;1.33e-35;68!UBERON:0001017;2.52e-34;75!UBERON:0001016;5.62e-30;83!UBERON:0004732;1.57e-17;13!UBERON:0002420;1.76e-16;9!UBERON:0007245;1.76e-16;9!UBERON:0010009;1.76e-16;9!UBERON:0010011;1.76e-16;9!UBERON:0000454;1.76e-16;9!UBERON:0004733;3.19e-16;12!UBERON:0002028;3.19e-16;12!UBERON:0000125;3.54e-16;9!UBERON:0002308;3.54e-16;9!UBERON:0009663;4.88e-13;7!UBERON:0001871;7.66e-13;6!UBERON:0002680;1.90e-11;9!UBERON:0001895;1.90e-11;9!UBERON:0000200;2.75e-11;6!UBERON:0002298;4.15e-11;6!UBERON:0000349;1.90e-10;5!UBERON:0011216;3.67e-10;132!UBERON:0001872;5.79e-10;5!UBERON:0007023;9.04e-10;114!UBERON:0002021;1.13e-09;5!UBERON:0000369;1.54e-08;4!UBERON:0002435;1.54e-08;4!UBERON:0000204;1.54e-08;4!UBERON:0001894;1.78e-08;7!UBERON:0010314;1.86e-07;132!UBERON:0002784;2.09e-07;4!UBERON:0002037;4.94e-07;6!UBERON:0005383;8.36e-07;3!UBERON:0005382;8.36e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.47e-89,81;UBERON:0001049,2.37e-88,56;UBERON:0005068,2.37e-88,56;UBERON:0006241,2.37e-88,56;UBERON:0007135,2.37e-88,56;UBERON:0001016,1.05e-83,89;UBERON:0000073,4.39e-83,53;UBERON:0002616,4.39e-83,53;UBERON:0000955,1.49e-79,68;UBERON:0006238,1.49e-79,68;UBERON:0003075,2.13e-68,82;UBERON:0007284,2.13e-68,82;UBERON:0002780,2.54e-67,41;UBERON:0001890,2.54e-67,41;UBERON:0003080,2.54e-67,41;UBERON:0006240,2.54e-67,41;UBERON:0002346,1.37e-66,86;UBERON:0001893,1.44e-60,34;UBERON:0003528,1.55e-60,34;UBERON:0002020,1.55e-60,34;UBERON:0001869,1.82e-57,32;UBERON:0002791,3.12e-57,32;UBERON:0003056,1.61e-54,61;UBERON:0010371,5.41e-50,104;UBERON:0000956,2.03e-45,25;UBERON:0000203,2.03e-45,25;UBERON:0004121,3.79e-43,171;UBERON:0000924,3.79e-43,171;UBERON:0006601,3.79e-43,171;UBERON:0010314,1.42e-41,132;UBERON:0002619,1.27e-39,22;UBERON:0001950,5.84e-36,20;UBE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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64067 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19311 | |||
|TSSclassifier=W | |||
|UniProt=F8VR32,F8VS42 | |||
|association_with_transcript=-214bp_to_ENST00000551492,ENST00000551634_5end | |||
|coexpression_cluster_id=C1030 | |||
|description=CAGE_peak_1_at_NPAS3_5end | |||
|id=chr14:33403881..33403924,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.99e-10!25;CL:0000128!4.32e-07!7;CL:0000126!4.32e-07!7;CL:0000127!4.32e-07!7;CL:0002453!4.32e-07!7;CL:0000133!6.20e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.39e-10;25!CL:0000128;4.29e-09;7!CL:0000126;4.29e-09;7!CL:0000127;4.29e-09;7!CL:0002605;2.35e-07;3!CL:0000243;7.98e-07;15!CL:0000125;7.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.67e-10,25;CL:0000128,3.65e-09,7;CL:0000126,3.65e-09,7;CL:0000127,3.65e-09,7;CL:0002453,3.65e-09,7;CL:0002605,2.35e-07,3;CL:0000243,7.13e-07,15;CL:0000125,7.13e-07,15;CL:0000030,7.13e-07,15;CL:0000339,7.13e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.11e-15;82!UBERON:0006238;5.83e-07;10!CL:0000339;7.98e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@NPAS3 | |||
}} |
Revision as of 04:19, 11 September 2013
Short description: | p1@NPAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NPAS3_5end |
Coexpression cluster: | C1030_Astrocyte_anaplastic_Neural_parietal_hippocampus_occipital_spinal |
Association with transcript: | -214bp_to_ENST00000551492, ENST00000551634_5end |
EntrezGene: | NPAS3 |
HGNC: | 19311 |
UniProt: | F8VR32F8VS42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.67e-10 | 25 |
oligodendrocyte | 3.65e-09 | 7 |
macroglial cell | 3.65e-09 | 7 |
astrocyte | 3.65e-09 | 7 |
oligodendrocyte precursor cell | 3.65e-09 | 7 |
astrocyte of the cerebral cortex | 2.35e-07 | 3 |
glial cell (sensu Vertebrata) | 7.13e-07 | 15 |
glial cell | 7.13e-07 | 15 |
glioblast | 7.13e-07 | 15 |
glioblast (sensu Vertebrata) | 7.13e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.