FFCP PHASE1:Mm9::chr11:42825666..42825689,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=786|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:42825666..42825689,+|id=chr11:42825666..42825689,+|ontology_enrichment_celltype=CL:0000540!1.72e-11!33;CL:0000047!1.72e-11!33;CL:0000031!1.72e-11!33;CL:0000404!1.72e-11!33;CL:0000107!6.35e-11!9;CL:0000221!8.00e-10!44;CL:0000133!8.00e-10!44;CL:0002319!4.34e-09!43;CL:0000393!1.40e-08!39;CL:0000211!1.40e-08!39;CL:0000055!9.23e-07!50|ontology_enrichment_celltype_v019_2=CL:0000107,4.45e-28,9;CL:0000540,1.28e-13,33;CL:0000047,1.28e-13,33;CL:0000031,1.28e-13,33;CL:0000404,1.28e-13,33;CL:0000221,4.76e-13,44;CL:0000133,4.76e-13,44;CL:0002319,1.66e-11,43;CL:0000393,4.02e-11,39;CL:0000211,4.02e-11,39;CL:0002321,4.49e-07,70;CL:0000197,5.30e-07,2;CL:0002491,5.30e-07,2;CL:0000098,5.30e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.50e-23!102;UBERON:0000924!1.50e-23!102;UBERON:0006601!1.50e-23!102;UBERON:0000073!3.89e-23!75;UBERON:0001016!3.89e-23!75;UBERON:0001017!1.90e-21!73;UBERON:0005743!1.90e-21!73;UBERON:0002346!6.83e-17!71;UBERON:0003075!6.83e-17!71;UBERON:0007284!6.83e-17!71;UBERON:0001049!1.35e-14!52;UBERON:0005068!1.35e-14!52;UBERON:0006241!1.35e-14!52;UBERON:0007135!1.35e-14!52;UBERON:0000033!6.58e-13!63;UBERON:0002616!1.05e-12!49;UBERON:0000010!1.16e-12!11;UBERON:0000955!3.02e-12!50;UBERON:0006238!3.02e-12!50;UBERON:0002410!6.35e-11!9;UBERON:0003080!9.39e-10!40;UBERON:0003056!1.02e-09!49;UBERON:0002780!5.01e-09!39;UBERON:0001890!5.01e-09!39;UBERON:0006240!5.01e-09!39;UBERON:0002020!1.11e-08!34;UBERON:0007811!2.06e-07!86;UBERON:0002791!7.37e-07!29;UBERON:0003528!7.37e-07!29;UBERON:0001893!7.37e-07!29;UBERON:0002298!7.61e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.45e-28,9;UBERON:0000010,1.02e-27,11;UBERON:0001016,6.24e-24,75;UBERON:0001017,1.19e-22,73;UBERON:0004121,1.27e-19,95;UBERON:0000924,1.27e-19,95;UBERON:0006601,1.27e-19,95;UBERON:0000011,7.17e-11,3;UBERON:0000013,2.00e-10,3;UBERON:0010371,2.47e-10,73;UBERON:0010313,5.46e-10,3;UBERON:0002342,5.46e-10,3;UBERON:0002005,5.46e-10,3;UBERON:0005428,5.46e-10,3;UBERON:0005062,5.46e-10,3;UBERON:0002346,2.06e-09,64;UBERON:0003075,2.06e-09,64;UBERON:0007284,2.06e-09,64;UBERON:0000073,1.70e-08,54;UBERON:0001896,5.50e-08,2;UBERON:0002298,5.50e-08,2;UBERON:0005290,5.50e-08,2;UBERON:0010096,5.50e-08,2;UBERON:0001049,9.09e-08,52;UBERON:0005068,9.09e-08,52;UBERON:0006241,9.09e-08,52;UBERON:0007135,9.09e-08,52;UBERON:0002616,1.48e-07,46;UBERON:0010314,1.95e-07,92;UBERON:0000955,2.40e-07,47;UBERON:0006238,2.40e-07,47;UBERON:0004766,5.30e-07,2;UBERON:0008193,5.30e-07,2;UBERON:0005913,5.30e-07,2;UBERON:0011158,5.30e-07,2;UBERON:0005744,5.30e-07,2;UBERON:0003457,5.30e-07,2;UBERON:0008001,5.30e-07,2;UBERON:0007497,5.30e-07,2;UBERON:0009955,5.30e-07,2;UBERON:0003067,5.30e-07,2;UBERON:0002546,5.30e-07,2;UBERON:0007914,5.30e-07,2;UBERON:0005253,5.30e-07,2;UBERON:0002227,5.30e-07,2;UBERON:0001846,5.30e-07,2;UBERON:0004339,5.30e-07,2;UBERON:0002105,5.30e-07,2;UBERON:0001678,5.30e-07,2;UBERON:0003128,5.30e-07,2;UBERON:0001694,5.30e-07,2;UBERON:0004681,5.30e-07,2;UBERON:0001839,5.30e-07,2;UBERON:0001690,5.30e-07,2;UBERON:0001844,5.30e-07,2;UBERON:0001849,5.30e-07,2;UBERON:0002499,5.30e-07,2;UBERON:0001855,5.30e-07,2;UBERON:0011137,5.30e-07,2;UBERON:0001703,5.30e-07,2;UBERON:0010323,5.30e-07,2;UBERON:0003129,5.30e-07,2;UBERON:0003069,5.30e-07,2;UBERON:0003051,5.30e-07,2;UBERON:0004637,5.30e-07,2;UBERON:0004761,5.30e-07,2;UBERON:0010113,5.30e-07,2;UBERON:0009123,5.30e-07,2;UBERON:0010351,5.30e-07,2;UBERON:0009617,5.30e-07,2;UBERON:0005641,5.30e-07,2;UBERON:0010349,5.30e-07,2;UBERON:0011216,5.32e-07,194|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.571301968807607,0.220868540951614,0,0,0,0,1.27687338085188,1.68967186581868,0.263772575460388,0.182975287204819,0,0.279182999001381,0.56276261003168,1.83357897332172,0.589257170947335,0.854230084794618,0,0.984440513331393,1.51143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,2.39433813620357,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.452167921657868,0.470354828542819,0,0,0,0,0.647067399789637,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.9472783122627,2.74500361691176,0,1.21677024134594,0.255715457330331,4.1557608911912,1.78465389374533,0,0,0,0,0.260240885925407,0.459804208866946,0,0,0,0,0.187403449119458,0.776110112217047,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.10289948564127,0.308713837137853,0,0,0,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,5.04010252346474,0,0,1.57754109708128,1.95219372148319,3.23135096599198,4.06246956519338,4.90157082981267,3.11384183867716,2.83367491172426,2.04579100537918,3.95287777946523,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0.608929898229199,0,0,0,0,0.161464426695906,0.301564624640779,0.358117032009409,0.164140899745061,0,5.19190845629427,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,1.71868654031819,0.343706364687375,0.685082519770642,1.5107877947794,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0.512200817262403,0.486213434136588,0.419226325255965,0,0,0,0,0,0.25347929989024,0.188626341386076,0.37456602987953,0.320125762024346,0.459483751644906,0,0,0,0.412085900803307,0.294397840268795,0,0.532427418478012,0,0,0.188218760830661,0.507687647350059,0.182927972872773,0,0.271608227691724,0,0.474540072496697,0.492522411877817,1.22769312950907,0,0,0.999242311751784,0,0,1.14772999241306,0.220591419119515,0|short_description=p@chr11:42825666..42825689,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=786 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:42825666..42825689,+ | |||
|id=chr11:42825666..42825689,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.72e-11!33;CL:0000047!1.72e-11!33;CL:0000031!1.72e-11!33;CL:0000404!1.72e-11!33;CL:0000107!6.35e-11!9;CL:0000221!8.00e-10!44;CL:0000133!8.00e-10!44;CL:0002319!4.34e-09!43;CL:0000393!1.40e-08!39;CL:0000211!1.40e-08!39;CL:0000055!9.23e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.45e-28,9;CL:0000540,1.28e-13,33;CL:0000047,1.28e-13,33;CL:0000031,1.28e-13,33;CL:0000404,1.28e-13,33;CL:0000221,4.76e-13,44;CL:0000133,4.76e-13,44;CL:0002319,1.66e-11,43;CL:0000393,4.02e-11,39;CL:0000211,4.02e-11,39;CL:0002321,4.49e-07,70;CL:0000197,5.30e-07,2;CL:0002491,5.30e-07,2;CL:0000098,5.30e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.50e-23!102;UBERON:0000924!1.50e-23!102;UBERON:0006601!1.50e-23!102;UBERON:0000073!3.89e-23!75;UBERON:0001016!3.89e-23!75;UBERON:0001017!1.90e-21!73;UBERON:0005743!1.90e-21!73;UBERON:0002346!6.83e-17!71;UBERON:0003075!6.83e-17!71;UBERON:0007284!6.83e-17!71;UBERON:0001049!1.35e-14!52;UBERON:0005068!1.35e-14!52;UBERON:0006241!1.35e-14!52;UBERON:0007135!1.35e-14!52;UBERON:0000033!6.58e-13!63;UBERON:0002616!1.05e-12!49;UBERON:0000010!1.16e-12!11;UBERON:0000955!3.02e-12!50;UBERON:0006238!3.02e-12!50;UBERON:0002410!6.35e-11!9;UBERON:0003080!9.39e-10!40;UBERON:0003056!1.02e-09!49;UBERON:0002780!5.01e-09!39;UBERON:0001890!5.01e-09!39;UBERON:0006240!5.01e-09!39;UBERON:0002020!1.11e-08!34;UBERON:0007811!2.06e-07!86;UBERON:0002791!7.37e-07!29;UBERON:0003528!7.37e-07!29;UBERON:0001893!7.37e-07!29;UBERON:0002298!7.61e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.45e-28,9;UBERON:0000010,1.02e-27,11;UBERON:0001016,6.24e-24,75;UBERON:0001017,1.19e-22,73;UBERON:0004121,1.27e-19,95;UBERON:0000924,1.27e-19,95;UBERON:0006601,1.27e-19,95;UBERON:0000011,7.17e-11,3;UBERON:0000013,2.00e-10,3;UBERON:0010371,2.47e-10,73;UBERON:0010313,5.46e-10,3;UBERON:0002342,5.46e-10,3;UBERON:0002005,5.46e-10,3;UBERON:0005428,5.46e-10,3;UBERON:0005062,5.46e-10,3;UBERON:0002346,2.06e-09,64;UBERON:0003075,2.06e-09,64;UBERON:0007284,2.06e-09,64;UBERON:0000073,1.70e-08,54;UBERON:0001896,5.50e-08,2;UBERON:0002298,5.50e-08,2;UBERON:0005290,5.50e-08,2;UBERON:0010096,5.50e-08,2;UBERON:0001049,9.09e-08,52;UBERON:0005068,9.09e-08,52;UBERON:0006241,9.09e-08,52;UBERON:0007135,9.09e-08,52;UBERON:0002616,1.48e-07,46;UBERON:0010314,1.95e-07,92;UBERON:0000955,2.40e-07,47;UBERON:0006238,2.40e-07,47;UBERON:0004766,5.30e-07,2;UBERON:0008193,5.30e-07,2;UBERON:0005913,5.30e-07,2;UBERON:0011158,5.30e-07,2;UBERON:0005744,5.30e-07,2;UBERON:0003457,5.30e-07,2;UBERON:0008001,5.30e-07,2;UBERON:0007497,5.30e-07,2;UBERON:0009955,5.30e-07,2;UBERON:0003067,5.30e-07,2;UBERON:0002546,5.30e-07,2;UBERON:0007914,5.30e-07,2;UBERON:0005253,5.30e-07,2;UBERON:0002227,5.30e-07,2;UBERON:0001846,5.30e-07,2;UBERON:0004339,5.30e-07,2;UBERON:0002105,5.30e-07,2;UBERON:0001678,5.30e-07,2;UBERON:0003128,5.30e-07,2;UBERON:0001694,5.30e-07,2;UBERON:0004681,5.30e-07,2;UBERON:0001839,5.30e-07,2;UBERON:0001690,5.30e-07,2;UBERON:0001844,5.30e-07,2;UBERON:0001849,5.30e-07,2;UBERON:0002499,5.30e-07,2;UBERON:0001855,5.30e-07,2;UBERON:0011137,5.30e-07,2;UBERON:0001703,5.30e-07,2;UBERON:0010323,5.30e-07,2;UBERON:0003129,5.30e-07,2;UBERON:0003069,5.30e-07,2;UBERON:0003051,5.30e-07,2;UBERON:0004637,5.30e-07,2;UBERON:0004761,5.30e-07,2;UBERON:0010113,5.30e-07,2;UBERON:0009123,5.30e-07,2;UBERON:0010351,5.30e-07,2;UBERON:0009617,5.30e-07,2;UBERON:0005641,5.30e-07,2;UBERON:0010349,5.30e-07,2;UBERON:0011216,5.32e-07,194 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.571301968807607,0.220868540951614,0,0,0,0,1.27687338085188,1.68967186581868,0.263772575460388,0.182975287204819,0,0.279182999001381,0.56276261003168,1.83357897332172,0.589257170947335,0.854230084794618,0,0.984440513331393,1.51143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,2.39433813620357,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.452167921657868,0.470354828542819,0,0,0,0,0.647067399789637,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.9472783122627,2.74500361691176,0,1.21677024134594,0.255715457330331,4.1557608911912,1.78465389374533,0,0,0,0,0.260240885925407,0.459804208866946,0,0,0,0,0.187403449119458,0.776110112217047,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.10289948564127,0.308713837137853,0,0,0,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,5.04010252346474,0,0,1.57754109708128,1.95219372148319,3.23135096599198,4.06246956519338,4.90157082981267,3.11384183867716,2.83367491172426,2.04579100537918,3.95287777946523,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0.608929898229199,0,0,0,0,0.161464426695906,0.301564624640779,0.358117032009409,0.164140899745061,0,5.19190845629427,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,1.71868654031819,0.343706364687375,0.685082519770642,1.5107877947794,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0.512200817262403,0.486213434136588,0.419226325255965,0,0,0,0,0,0.25347929989024,0.188626341386076,0.37456602987953,0.320125762024346,0.459483751644906,0,0,0,0.412085900803307,0.294397840268795,0,0.532427418478012,0,0,0.188218760830661,0.507687647350059,0.182927972872773,0,0.271608227691724,0,0.474540072496697,0.492522411877817,1.22769312950907,0,0,0.999242311751784,0,0,1.14772999241306,0.220591419119515,0 | |||
|short_description=p@chr11:42825666..42825689,+ | |||
}} |
Revision as of 19:40, 12 September 2013
Short description: | p@chr11:42825666..42825689, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:42825666..42825689, + |
Coexpression cluster: | MCL_coexpression_mm9:786 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.45e-28 | 9 |
neuron | 1.28e-13 | 33 |
neuronal stem cell | 1.28e-13 | 33 |
neuroblast | 1.28e-13 | 33 |
electrically signaling cell | 1.28e-13 | 33 |
ectodermal cell | 4.76e-13 | 44 |
neurectodermal cell | 4.76e-13 | 44 |
neural cell | 1.66e-11 | 43 |
electrically responsive cell | 4.02e-11 | 39 |
electrically active cell | 4.02e-11 | 39 |
embryonic cell | 4.49e-07 | 70 |
receptor cell | 5.30e-07 | 2 |
auditory epithelial cell | 5.30e-07 | 2 |
sensory epithelial cell | 5.30e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.