FFCP PHASE1:Hg19::chr18:40857329..40857357,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6860 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11512 | |||
|TSSclassifier=strong | |||
|UniProt=F5GY31 | |||
|association_with_transcript=0bp_to_ENST00000442661_5end | |||
|coexpression_cluster_id=C759 | |||
|description=CAGE_peak_2_at_SYT4_5end | |||
|id=chr18:40857329..40857357,- | |||
|ontology_enrichment_celltype=CL:0000047!1.03e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000333;4.14e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.21e-20;82!UBERON:0006215;8.25e-09;3!UBERON:0006241;4.95e-07;3!UBERON:0003057;4.95e-07;3 | |||
|ontology_enrichment_disease=DOID:171!1.03e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:171;4.50e-10;10!DOID:169;4.47e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.57e-10,10;DOID:169,4.80e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.03e-62!82;UBERON:0000073!5.63e-61!94;UBERON:0001016!5.63e-61!94;UBERON:0005743!1.87e-60!86;UBERON:0001049!3.58e-60!57;UBERON:0005068!3.58e-60!57;UBERON:0006241!3.58e-60!57;UBERON:0007135!3.58e-60!57;UBERON:0002616!3.81e-50!59;UBERON:0002780!7.43e-49!41;UBERON:0001890!7.43e-49!41;UBERON:0006240!7.43e-49!41;UBERON:0000955!3.45e-48!69;UBERON:0006238!3.45e-48!69;UBERON:0003080!2.17e-47!42;UBERON:0002346!8.32e-45!90;UBERON:0007023!7.98e-42!115;UBERON:0003075!1.16e-40!86;UBERON:0007284!1.16e-40!86;UBERON:0001869!4.22e-39!32;UBERON:0001893!8.92e-39!34;UBERON:0002020!1.06e-38!34;UBERON:0003528!1.06e-38!34;UBERON:0002791!3.10e-37!33;UBERON:0002619!3.02e-34!22;UBERON:0003056!7.49e-32!61;UBERON:0001950!1.69e-31!20;UBERON:0000924!9.10e-31!173;UBERON:0006601!9.10e-31!173;UBERON:0000956!2.49e-29!25;UBERON:0000203!2.49e-29!25;UBERON:0004121!1.15e-27!169;UBERON:0000153!4.39e-23!129;UBERON:0007811!4.39e-23!129;UBERON:0000033!4.84e-23!123;UBERON:0000025!1.82e-14!194;UBERON:0003076!1.64e-13!15;UBERON:0003057!1.64e-13!15;UBERON:0001871!1.66e-12!7;UBERON:0001894!1.94e-11!7;UBERON:0006222!1.94e-11!7;UBERON:0002420!7.66e-11!9;UBERON:0007245!7.66e-11!9;UBERON:0010009!7.66e-11!9;UBERON:0010011!7.66e-11!9;UBERON:0000454!7.66e-11!9;UBERON:0002308!1.08e-10!9;UBERON:0000125!1.08e-10!9;UBERON:0000200!1.80e-10!6;UBERON:0004111!2.15e-10!241;UBERON:0004733!4.99e-10!12;UBERON:0002028!4.99e-10!12;UBERON:0007277!4.99e-10!12;UBERON:0004732!4.43e-09!13;UBERON:0001872!8.76e-09!5;UBERON:0002021!9.48e-09!5;UBERON:0000349!1.38e-08!5;UBERON:0009663!3.48e-08!7;UBERON:0003296!1.15e-07!4;UBERON:0010133!1.15e-07!4;UBERON:0000369!1.86e-07!4;UBERON:0002435!1.86e-07!4;UBERON:0000204!1.86e-07!4;UBERON:0010082!1.86e-07!4;UBERON:0000477!1.93e-07!286;UBERON:0000483!2.31e-07!309;UBERON:0000119!3.95e-07!312;UBERON:0000922!5.67e-07!612;UBERON:0002298!8.89e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.31e-50;22!UBERON:0002780;6.57e-49;41!UBERON:0001890;6.57e-49;41!UBERON:0001869;1.08e-48;32!UBERON:0003528;3.52e-47;34!UBERON:0002020;3.52e-47;34!UBERON:0001893;1.91e-46;34!UBERON:0001950;7.10e-46;20!UBERON:0002791;1.87e-45;32!UBERON:0000073;3.42e-45;53!UBERON:0002616;3.42e-45;53!UBERON:0000956;2.46e-43;25!UBERON:0000203;2.46e-43;25!UBERON:0001017;1.28e-33;75!UBERON:0000955;3.77e-33;68!UBERON:0001016;4.07e-29;83!UBERON:0001894;3.91e-16;7!UBERON:0001871;1.28e-15;6!UBERON:0000200;9.95e-15;6!UBERON:0004733;1.21e-14;12!UBERON:0002028;1.21e-14;12!UBERON:0004732;2.30e-13;13!UBERON:0002298;3.99e-13;6!UBERON:0007023;1.72e-12;114!UBERON:0002420;2.93e-12;9!UBERON:0007245;2.93e-12;9!UBERON:0010009;2.93e-12;9!UBERON:0010011;2.93e-12;9!UBERON:0000454;2.93e-12;9!UBERON:0001872;3.15e-12;5!UBERON:0002021;3.46e-12;5!UBERON:0011216;3.72e-12;132!UBERON:0000125;4.45e-12;9!UBERON:0002308;4.45e-12;9!UBERON:0000349;6.90e-12;5!UBERON:0003296;1.41e-10;4!UBERON:0010133;1.41e-10;4!UBERON:0000369;2.87e-10;4!UBERON:0002435;2.87e-10;4!UBERON:0000204;2.87e-10;4!UBERON:0002784;1.53e-09;4!UBERON:0002680;1.86e-09;9!UBERON:0001895;1.86e-09;9!UBERON:0009663;1.58e-08;7!UBERON:0001870;1.84e-08;3!UBERON:0005383;5.26e-08;3!UBERON:0005382;5.26e-08;3!UBERON:0000988;1.57e-07;3!UBERON:0001896;2.95e-07;3!UBERON:0005290;2.95e-07;3!UBERON:0000013;4.14e-07;5!UBERON:0002410;4.14e-07;5!UBERON:0002240;4.95e-07;3!UBERON:0005174;4.95e-07;3!UBERON:0001137;4.95e-07;3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545812300115692,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,1.17842362989935,1.55073726208535,0.541607727530031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73290365168481,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,1.55491582523056,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97065295158377,0,0,0.144119953416961,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,32.5349634644054,14.6924874427762,35.8484807815506,21.0519788045544,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.8068723762878,7.7368179025782,0,0,0,1.19548792950642,0,69.5334384077802,0,0,0,0,0,0,0.789147245095469,0,0,6.78532922266653,51.5790625779893,13.9729658600836,0,0,0,0,0,0,2.75794698593172,6.12369688104834,2.60437492399938,15.0576035588353,32.5610384288601,111.384667511471,64.467708539904,66.4982142645482,26.3262476584767,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,0,0,0,0,2.15683625538167,0.802577647298789,18.2726267665765,0,0,0,0,2.41981432097328,18.6704384594599,0.821425535170343,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0,0,3.61569185248852,0,0,62.9309311801434,0,0,0,0,0,0,129.039438392197,0,0,0,0,0,0,0,10.8075651967762,0.958337652243951,0,0,0,0,0,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,0,32.6044172821814,6.94637371169036,0,0.825236619583403,0.83088067605837,0,0,40.7022029608765,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.30837285803164,12.6943297672982,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,57.5944316978541,51.0069787290206,27.792386616843,4.0138643698305,9.31804032909559,16.6418359882908,1.38348634936231,0,0,0,0,1.87333962322753,4.78239394415723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1118551358767,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,6.39471856518258,3.34256915329714,4.08891448825331,13.4327854976177,0.169732529954025,2.97604888142356,44.9886824260178,0,0,0,139.299310201672,0,0,41.2993917370235,41.0920071344196,14.6863150332579,31.5879200930763,37.3066110408143,17.2201558635903,31.8107021894747,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,44.2371179250485,35.1485144376231,25.6291627661468,36.4006750513025,25.7078160238563,0,0,0.175871244359621,0,24.1065826145229,39.3451954996024,54.0199387770602,45.5324382702595,0,0,0,27.1199234577559,23.6124257090628,0,0,0.470958557103084,38.4933195294205,0,1.82631744101899,0,0,0.929195074296532,0,0,0,0,0,0,0,0,0,0,2.9637093513365,0,0,0,0,0,0,0,0,0,0,0,3.97901550322736,0.713520544665411,0,0.879524133963433,89.9738547657374,0.540219106755613,0.437119121007915,11.7579324090381,0,26.1600967282805,6.67448788190814,4.1586496045792,5.9171801861676,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,20.0574896063198,13.0905207102113,3.1741610430924,0,0,0,0,0,1.64708051314868,0,0,0.0918948995348449,0,0,0,11.6083721524229,3.72358785102823,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p2@SYT4 | |||
}} |
Revision as of 19:10, 20 January 2014
Short description: | p2@SYT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYT4_5end |
Coexpression cluster: | C759_nonsmall_gastrointestinal_occipital_pineal_cerebellum_small_argyrophil |
Association with transcript: | 0bp_to_ENST00000442661_5end |
EntrezGene: | SYT4 |
HGNC: | 11512 |
UniProt: | F5GY31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.57e-10 | 10 |
neuroendocrine tumor | 4.80e-09 | 6 |