FFCP PHASE1:Hg19::chr9:130853715..130853759,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114789 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20663 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000373066,ENST00000432073_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_SLC25A25_5end | |||
|id=chr9:130853715..130853759,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.82e-26!180;CL:0000393!6.90e-14!60;CL:0000211!6.90e-14!60;CL:0000680!8.45e-14!57;CL:0000056!8.45e-14!57;CL:0000355!8.45e-14!57;CL:0000187!8.12e-13!54;CL:0000183!2.00e-12!59;CL:0000057!6.40e-12!75;CL:0000192!2.22e-10!42;CL:0000514!2.22e-10!42;CL:0000359!4.90e-08!32 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.64e-10,58;CL:0000056,6.64e-10,58;CL:0000355,6.64e-10,58;CL:0000393,1.62e-09,61;CL:0000211,1.62e-09,61;CL:0000187,8.18e-09,55;CL:0000057,2.07e-08,76;CL:0000192,1.34e-07,43;CL:0000514,1.34e-07,43 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.89e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;5.22e-28;53!UBERON:0002616;5.22e-28;53!UBERON:0001869;6.78e-28;32!UBERON:0001893;7.31e-28;34!UBERON:0003528;1.08e-27;34!UBERON:0002020;1.08e-27;34!UBERON:0002791;3.42e-27;32!UBERON:0002780;4.04e-27;41!UBERON:0001890;4.04e-27;41!UBERON:0000956;1.34e-24;25!UBERON:0000203;1.34e-24;25!UBERON:0002619;8.61e-22;22!UBERON:0001950;6.72e-20;20!UBERON:0000955;4.51e-19;68!UBERON:0001017;6.14e-18;75!UBERON:0001016;2.53e-16;83!UBERON:0004732;6.74e-13;13!UBERON:0004733;3.73e-12;12!UBERON:0002028;3.73e-12;12!UBERON:0002680;1.99e-09;9!UBERON:0001895;1.99e-09;9!UBERON:0000125;7.33e-09;9!UBERON:0002308;7.33e-09;9!UBERON:0002420;9.83e-09;9!UBERON:0007245;9.83e-09;9!UBERON:0010009;9.83e-09;9!UBERON:0010011;9.83e-09;9!UBERON:0000454;9.83e-09;9!UBERON:0000200;9.52e-08;6!UBERON:0001894;1.11e-07;7!UBERON:0002298;1.84e-07;6!UBERON:0011216;5.42e-07;132!UBERON:0009663;7.38e-07;7!UBERON:0004573;8.31e-07;33!UBERON:0004571;8.31e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.11e-52,56;UBERON:0005068,5.11e-52,56;UBERON:0006241,5.11e-52,56;UBERON:0007135,5.11e-52,56;UBERON:0000073,3.72e-49,53;UBERON:0002616,3.72e-49,53;UBERON:0001016,3.48e-46,89;UBERON:0001017,7.31e-46,81;UBERON:0000955,1.94e-41,68;UBERON:0006238,1.94e-41,68;UBERON:0003075,1.21e-40,82;UBERON:0007284,1.21e-40,82;UBERON:0002346,4.43e-39,86;UBERON:0002780,7.71e-38,41;UBERON:0001890,7.71e-38,41;UBERON:0003080,7.71e-38,41;UBERON:0006240,7.71e-38,41;UBERON:0003528,9.06e-32,34;UBERON:0002020,9.06e-32,34;UBERON:0001893,1.65e-31,34;UBERON:0001869,1.01e-30,32;UBERON:0010314,9.39e-30,132;UBERON:0003056,9.52e-30,61;UBERON:0002791,1.08e-29,32;UBERON:0010371,2.91e-29,104;UBERON:0004121,5.14e-25,171;UBERON:0000924,5.14e-25,171;UBERON:0006601,5.14e-25,171;UBERON:0000956,1.62e-24,25;UBERON:0000203,1.62e-24,25;UBERON:0002619,1.02e-21,22;UBERON:0001950,7.73e-20,20;UBERON:0000025,7.48e-19,192;UBERON:0007023,2.90e-16,114;UBERON:0011216,3.22e-16,223;UBERON:0000483,3.49e-15,306;UBERON:0003076,7.74e-15,15;UBERON:0003057,7.74e-15,15;UBERON:0000119,1.10e-14,309;UBERON:0004111,8.51e-14,240;UBERON:0004732,6.06e-13,13;UBERON:0004733,3.34e-12,12;UBERON:0002028,3.34e-12,12;UBERON:0007277,3.34e-12,12;UBERON:0001134,7.89e-10,62;UBERON:0002036,7.89e-10,62;UBERON:0003082,7.89e-10,62;UBERON:0002385,9.04e-10,64;UBERON:0001015,9.04e-10,64;UBERON:0000383,9.04e-10,64;UBERON:0002680,1.74e-09,9;UBERON:0001895,1.74e-09,9;UBERON:0010092,1.74e-09,9;UBERON:0007524,4.13e-09,73;UBERON:0003077,6.99e-09,72;UBERON:0007285,6.99e-09,72;UBERON:0000125,1.18e-08,9;UBERON:0002308,1.18e-08,9;UBERON:0002420,1.51e-08,9;UBERON:0007245,1.51e-08,9;UBERON:0010009,1.51e-08,9;UBERON:0010011,1.51e-08,9;UBERON:0000454,1.51e-08,9;UBERON:0002329,2.36e-08,71;UBERON:0003059,2.36e-08,71;UBERON:0007282,2.36e-08,71;UBERON:0004290,2.36e-08,71;UBERON:0009618,2.36e-08,71;UBERON:0002050,3.06e-08,564;UBERON:0000923,3.19e-08,560;UBERON:0010316,3.19e-08,560;UBERON:0005291,3.19e-08,560;UBERON:0006598,3.19e-08,560;UBERON:0010317,3.19e-08,560;UBERON:0002532,3.19e-08,560;UBERON:0000200,1.01e-07,6;UBERON:0004573,1.10e-07,33;UBERON:0004571,1.10e-07,33;UBERON:0001894,1.17e-07,7;UBERON:0006222,1.17e-07,7;UBERON:0002298,1.91e-07,6;UBERON:0000479,2.73e-07,773;UBERON:0000486,8.03e-07,83 | |||
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| |||
|short_description=p4@SLC25A25 | |||
}} |
Revision as of 03:29, 23 January 2014
Short description: | p4@SLC25A25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC25A25_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000373066, ENST00000432073_5end |
EntrezGene: | SLC25A25 |
HGNC: | 20663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.64e-10 | 58 |
myoblast | 6.64e-10 | 58 |
multi-potent skeletal muscle stem cell | 6.64e-10 | 58 |
electrically responsive cell | 1.62e-09 | 61 |
electrically active cell | 1.62e-09 | 61 |
muscle cell | 8.18e-09 | 55 |
fibroblast | 2.07e-08 | 76 |
smooth muscle cell | 1.34e-07 | 43 |
smooth muscle myoblast | 1.34e-07 | 43 |