FFCP PHASE1:Mm9::chr11:77929067..77929103,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=216971|HGNC=|MCL_coexpression_id=3|UniProt=Q6P539|association_with_transcript=-4bp_to_ENSMUST00000155571_5end|description=CAGE_peak_5_at_BC017647_5end|id=chr11:77929067..77929103,+|ontology_enrichment_celltype=CL:0000117!3.18e-10!23;CL:0000337!3.18e-10!23;CL:0000540!1.75e-08!33;CL:0000047!1.75e-08!33;CL:0000031!1.75e-08!33;CL:0000404!1.75e-08!33;CL:0000393!9.01e-07!39;CL:0000211!9.01e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.57e-14,23;CL:0000337,1.57e-14,23;CL:0002609,5.43e-09,6;CL:0000540,1.01e-08,33;CL:0000047,1.01e-08,33;CL:0000031,1.01e-08,33;CL:0000404,1.01e-08,33;CL:0002319,2.00e-07,43;CL:0000221,3.79e-07,44;CL:0000133,3.79e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,9.97e-07,6|ontology_enrichment_uberon=UBERON:0001017!1.72e-09!73;UBERON:0005743!1.72e-09!73;UBERON:0000073!1.47e-08!75;UBERON:0001016!1.47e-08!75;UBERON:0001049!1.90e-08!52;UBERON:0005068!1.90e-08!52;UBERON:0006241!1.90e-08!52;UBERON:0007135!1.90e-08!52;UBERON:0004121!5.35e-08!102;UBERON:0000924!5.35e-08!102;UBERON:0006601!5.35e-08!102;UBERON:0000955!7.61e-08!50;UBERON:0006238!7.61e-08!50;UBERON:0002616!1.80e-07!49;UBERON:0002346!5.41e-07!71;UBERON:0003075!5.41e-07!71;UBERON:0007284!5.41e-07!71;UBERON:0000033!8.59e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0002780,4.47e-10,39;UBERON:0001890,4.47e-10,39;UBERON:0006240,4.47e-10,39;UBERON:0003080,1.09e-09,40;UBERON:0000073,4.02e-09,54;UBERON:0001017,5.84e-09,73;UBERON:0001049,7.88e-09,52;UBERON:0005068,7.88e-09,52;UBERON:0006241,7.88e-09,52;UBERON:0007135,7.88e-09,52;UBERON:0001016,1.60e-08,75;UBERON:0000369,2.09e-08,5;UBERON:0002435,2.09e-08,5;UBERON:0000204,2.09e-08,5;UBERON:0010082,2.09e-08,5;UBERON:0000955,2.16e-08,47;UBERON:0006238,2.16e-08,47;UBERON:0002616,9.65e-08,46;UBERON:0000007,1.15e-07,8;UBERON:0003296,1.15e-07,8;UBERON:0010133,1.15e-07,8;UBERON:0002020,2.63e-07,34;UBERON:0003056,5.86e-07,49|phase1_expression=0.80074423552397,0.348975407639361,1.36499771816861,0,0,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,1.33243904726265,1.01237633694913,0.699561878128147,0.315462165358238,0.137114433605739,0,0.680346321208558,0.0992909512008853,0,0.319984845586813,0.68822784320151,1.72269589234506,0.86152399231815,1.50829862880122,0.190023419456374,0.252030129759931,0.665191531965914,1.27006134691926,1.84519436275371,0,0,0.166234645358492,0,8.78916424547506,3.1253413780952,6.28228492768558,12.3528612486513,9.56263678941824,6.79714494243615,0.251793635951155,0.405507724878058,0.550640256485045,0.782391344348039,0.65407546914134,0.439372365468944,1.1665793944457,0.55994568650145,1.43752564364972,0.167782606057736,0,0,0.257259436035947,0.573066879877513,0,4.04632921719196,1.05798195854407,1.90149421051854,0.677689064138264,0.889294796111139,0,0,0,0,0,1.76272340924412,1.08004750665353,1.68259969081106,0.856952953211411,1.10434270475807,2.81728838194394,2.87536413054709,9.19218786610021,1.10115880999389,0.638436690425939,0.768032666281217,3.42904348098504,4.11694396210843,4.68822033501084,1.11673199600552,0.56276261003168,0.916789486660861,0.589257170947335,1.13897344639282,2.23679334990361,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.280888840263504,0.511290967734173,0,0,0.422530259330042,0,0,0,0.216491041011214,0.506719730950197,0,0.45673551887624,0.258937883647172,0.445326417194474,0.520455980298408,0,0.230615497256059,0.150722640552623,0.470354828542819,0.628332956648377,0.741584903203122,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0.484875253135222,0,0.585561594023094,0.628340120440365,0,0.11981512450592,0,0,0.748953197024114,1.37250180845588,2.76439574648302,0.869121600961382,0.255715457330331,0.20778804455956,0.324482526135515,1.01839363850316,0.622034853050465,2.52722758433675,0.841767423545896,0.130120442962704,0.229902104433473,0.720248519221397,0.753524089178575,0.408218994907967,0.512454881139399,0.655912071918102,0.517406741478031,2.37124792226126,0.756424320671277,0.527853372491847,0.219195732427575,0,0.348252166522167,0.205782136407943,1.19420560091096,0,0,0,0.621377317606506,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0.492502392237286,0.324275238183423,0.146199987425332,0,0.134206418760372,0.630869845692382,0.823236899034275,0,0.264450566663544,0.639864751605702,0.464473343720877,0.77320476793256,0.403367049246685,0.444756087689741,1.14135375667535,0.474529061544512,0.823494773620054,0.502670417600539,0.795825888164603,0.19496408711912,0,0,0.597423819763102,0.189667900953082,0.342745537829186,0,0,0.775809948670503,0.561086559122548,0.885311519739602,0.738050739898011,0.156998727841375,0.123397163921801,0,0.333690211432188,0.589676985339609,0.899448449539415,0.811440485554012,0.482354319504834,0.25462585178142,1.43848068725405,0.162135226775035,0.823684239564244,0,0.744281895337007,0.312037673114561,0,0,0,0.554259570499814,0.568474235311454,0.814824882210129,0,0.704070744865506,0.670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| ||
|EntrezGene=216971 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q6P539 | |||
|association_with_transcript=-4bp_to_ENSMUST00000155571_5end | |||
|description=CAGE_peak_5_at_BC017647_5end | |||
|id=chr11:77929067..77929103,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.18e-10!23;CL:0000337!3.18e-10!23;CL:0000540!1.75e-08!33;CL:0000047!1.75e-08!33;CL:0000031!1.75e-08!33;CL:0000404!1.75e-08!33;CL:0000393!9.01e-07!39;CL:0000211!9.01e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.57e-14,23;CL:0000337,1.57e-14,23;CL:0002609,5.43e-09,6;CL:0000540,1.01e-08,33;CL:0000047,1.01e-08,33;CL:0000031,1.01e-08,33;CL:0000404,1.01e-08,33;CL:0002319,2.00e-07,43;CL:0000221,3.79e-07,44;CL:0000133,3.79e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,9.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.72e-09!73;UBERON:0005743!1.72e-09!73;UBERON:0000073!1.47e-08!75;UBERON:0001016!1.47e-08!75;UBERON:0001049!1.90e-08!52;UBERON:0005068!1.90e-08!52;UBERON:0006241!1.90e-08!52;UBERON:0007135!1.90e-08!52;UBERON:0004121!5.35e-08!102;UBERON:0000924!5.35e-08!102;UBERON:0006601!5.35e-08!102;UBERON:0000955!7.61e-08!50;UBERON:0006238!7.61e-08!50;UBERON:0002616!1.80e-07!49;UBERON:0002346!5.41e-07!71;UBERON:0003075!5.41e-07!71;UBERON:0007284!5.41e-07!71;UBERON:0000033!8.59e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,4.47e-10,39;UBERON:0001890,4.47e-10,39;UBERON:0006240,4.47e-10,39;UBERON:0003080,1.09e-09,40;UBERON:0000073,4.02e-09,54;UBERON:0001017,5.84e-09,73;UBERON:0001049,7.88e-09,52;UBERON:0005068,7.88e-09,52;UBERON:0006241,7.88e-09,52;UBERON:0007135,7.88e-09,52;UBERON:0001016,1.60e-08,75;UBERON:0000369,2.09e-08,5;UBERON:0002435,2.09e-08,5;UBERON:0000204,2.09e-08,5;UBERON:0010082,2.09e-08,5;UBERON:0000955,2.16e-08,47;UBERON:0006238,2.16e-08,47;UBERON:0002616,9.65e-08,46;UBERON:0000007,1.15e-07,8;UBERON:0003296,1.15e-07,8;UBERON:0010133,1.15e-07,8;UBERON:0002020,2.63e-07,34;UBERON:0003056,5.86e-07,49 | |||
|phase1_expression=0.80074423552397,0.348975407639361,1.36499771816861,0,0,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,1.33243904726265,1.01237633694913,0.699561878128147,0.315462165358238,0.137114433605739,0,0.680346321208558,0.0992909512008853,0,0.319984845586813,0.68822784320151,1.72269589234506,0.86152399231815,1.50829862880122,0.190023419456374,0.252030129759931,0.665191531965914,1.27006134691926,1.84519436275371,0,0,0.166234645358492,0,8.78916424547506,3.1253413780952,6.28228492768558,12.3528612486513,9.56263678941824,6.79714494243615,0.251793635951155,0.405507724878058,0.550640256485045,0.782391344348039,0.65407546914134,0.439372365468944,1.1665793944457,0.55994568650145,1.43752564364972,0.167782606057736,0,0,0.257259436035947,0.573066879877513,0,4.04632921719196,1.05798195854407,1.90149421051854,0.677689064138264,0.889294796111139,0,0,0,0,0,1.76272340924412,1.08004750665353,1.68259969081106,0.856952953211411,1.10434270475807,2.81728838194394,2.87536413054709,9.19218786610021,1.10115880999389,0.638436690425939,0.768032666281217,3.42904348098504,4.11694396210843,4.68822033501084,1.11673199600552,0.56276261003168,0.916789486660861,0.589257170947335,1.13897344639282,2.23679334990361,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.280888840263504,0.511290967734173,0,0,0.422530259330042,0,0,0,0.216491041011214,0.506719730950197,0,0.45673551887624,0.258937883647172,0.445326417194474,0.520455980298408,0,0.230615497256059,0.150722640552623,0.470354828542819,0.628332956648377,0.741584903203122,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0.484875253135222,0,0.585561594023094,0.628340120440365,0,0.11981512450592,0,0,0.748953197024114,1.37250180845588,2.76439574648302,0.869121600961382,0.255715457330331,0.20778804455956,0.324482526135515,1.01839363850316,0.622034853050465,2.52722758433675,0.841767423545896,0.130120442962704,0.229902104433473,0.720248519221397,0.753524089178575,0.408218994907967,0.512454881139399,0.655912071918102,0.517406741478031,2.37124792226126,0.756424320671277,0.527853372491847,0.219195732427575,0,0.348252166522167,0.205782136407943,1.19420560091096,0,0,0,0.621377317606506,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0.492502392237286,0.324275238183423,0.146199987425332,0,0.134206418760372,0.630869845692382,0.823236899034275,0,0.264450566663544,0.639864751605702,0.464473343720877,0.77320476793256,0.403367049246685,0.444756087689741,1.14135375667535,0.474529061544512,0.823494773620054,0.502670417600539,0.795825888164603,0.19496408711912,0,0,0.597423819763102,0.189667900953082,0.342745537829186,0,0,0.775809948670503,0.561086559122548,0.885311519739602,0.738050739898011,0.156998727841375,0.123397163921801,0,0.333690211432188,0.589676985339609,0.899448449539415,0.811440485554012,0.482354319504834,0.25462585178142,1.43848068725405,0.162135226775035,0.823684239564244,0,0.744281895337007,0.312037673114561,0,0,0,0.554259570499814,0.568474235311454,0.814824882210129,0,0.704070744865506,0.670025029767263,0.952174563544055,0.585400943573396,0.157635144106191,0.8858587585951,0.637819074629948,0.491589944147214,0.863424909329478,0.433947175744535,0,0,0.983528546038072,0.551873492609465,0.80275294993896,0.937693492737625,0,0.252470927204373,0.94652465824877,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0,0.809621403349789,0.584511715822624,0.790575555893047,1.28528526568723,1.27746076687442,0.35613120733451,0.651547837414304,1.31976098378028,1.32745138339963,0.242780636154981,0.604647113929502,0.565815239267694,2.06711325016541,1.53717573971964,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,0,2.04263763452273,1.26042765821917,1.16422815404479,1.50035924522115,1.06404140185364,1.42695054081656,0.329098041204242,3.34911444026059,0.469343416127421,1.69465656691056,2.20528398054962,2.14352128823924,0.645857706783622,1.20625849856312,0.716234064018819,0.492422699235184,0,0.741701208042039,0.512612642393558,0.412773735926445,0.185194527369712,0.941842285023455,0.683471138605126,0.228778173206523,0,0.139951452323658,0,0,0.949007980743406,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0.299033092087958,0.827292452285488,0.972255941720238,0.774958940866387,0.168956125490778,0.352071715937262,0.781226309063701,1.78260885523708,0.483168241652012,0.576060012515731,0,0.810900861160657,0.308132871494482,0.129920822977795,0.358053391334963,0,0.120195449519969,0.590758108698309,0.201932899896295,0.228620419965,0.403304740547362,0.487289403698762,0.0962118416403295,0.116876902181569,0.226730383615211,1.77588762699252,0.986852422704233,0.503653849092235,0,0.375364950902364,0.549454872801795,0.214368379079066,1.50471631210609,0,0,0,0.859265911718438,0,0.755393897389701,0,0,0.906284817968409,0.51776031175182,1.14166082342594,0,0.512200817262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| |||
|short_description=p5@BC017647 | |||
}} |
Revision as of 21:01, 12 September 2013
Short description: | p5@BC017647 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_BC017647_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -4bp_to_ENSMUST00000155571_5end |
EntrezGene: | BC017647 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.57e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.57e-14 | 23 |
neuron of cerebral cortex | 5.43e-09 | 6 |
neuron | 1.01e-08 | 33 |
neuronal stem cell | 1.01e-08 | 33 |
neuroblast | 1.01e-08 | 33 |
electrically signaling cell | 1.01e-08 | 33 |
neural cell | 2.00e-07 | 43 |
ectodermal cell | 3.79e-07 | 44 |
neurectodermal cell | 3.79e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 4.47e-10 | 39 |
forebrain | 4.47e-10 | 39 |
future forebrain | 4.47e-10 | 39 |
anterior neural tube | 1.09e-09 | 40 |
regional part of nervous system | 4.02e-09 | 54 |
central nervous system | 5.84e-09 | 73 |
neural tube | 7.88e-09 | 52 |
neural rod | 7.88e-09 | 52 |
future spinal cord | 7.88e-09 | 52 |
neural keel | 7.88e-09 | 52 |
nervous system | 1.60e-08 | 75 |
corpus striatum | 2.09e-08 | 5 |
striatum | 2.09e-08 | 5 |
ventral part of telencephalon | 2.09e-08 | 5 |
future corpus striatum | 2.09e-08 | 5 |
brain | 2.16e-08 | 47 |
future brain | 2.16e-08 | 47 |
regional part of brain | 9.65e-08 | 46 |
pituitary gland | 1.15e-07 | 8 |
gland of diencephalon | 1.15e-07 | 8 |
neuroendocrine gland | 1.15e-07 | 8 |
gray matter | 2.63e-07 | 34 |
pre-chordal neural plate | 5.86e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 9.97e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.