FFCP PHASE2:Hg19::chrX:50557014..50557060,-
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Short description: | p4@SHROOM4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SHROOM4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000376020, NM_020717, NR_027121, uc004dpd.3, uc004dpe.2_5end |
EntrezGene: | SHROOM4 |
HGNC: | 29215 |
UniProt: | Q9ULL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@SHROOM4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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blood vessel endothelial cell | 1.02e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.02e-21 | 18 |
endothelial cell of vascular tree | 7.18e-20 | 24 |
endothelial cell | 7.41e-17 | 36 |
meso-epithelial cell | 6.78e-14 | 45 |
endothelial cell of artery | 1.65e-13 | 9 |
lining cell | 1.55e-09 | 58 |
barrier cell | 1.55e-09 | 58 |
aortic endothelial cell | 1.63e-08 | 6 |
vein endothelial cell | 2.88e-08 | 6 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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neural tube | 3.58e-45 | 56 |
neural rod | 3.58e-45 | 56 |
future spinal cord | 3.58e-45 | 56 |
neural keel | 3.58e-45 | 56 |
regional part of nervous system | 7.68e-40 | 53 |
regional part of brain | 7.68e-40 | 53 |
neural plate | 1.69e-34 | 82 |
presumptive neural plate | 1.69e-34 | 82 |
central nervous system | 1.85e-34 | 81 |
regional part of forebrain | 2.43e-32 | 41 |
Showing 1 to 10 of 79 entries