FFCP PHASE1:Hg19::chr2:17722000..17722011,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7447 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12722 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=26bp_to_ENST00000483921_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_VSNL1_5end | |||
|id=chr2:17722000..17722011,+ | |||
|ontology_enrichment_celltype=CL:0000047!5.00e-08!8;CL:0002251!3.32e-07!21 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.65e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.75e-17;82!UBERON:0006215;1.41e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!5.17e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.77e-59!82;UBERON:0005743!2.09e-57!86;UBERON:0001049!3.93e-54!57;UBERON:0005068!3.93e-54!57;UBERON:0006241!3.93e-54!57;UBERON:0007135!3.93e-54!57;UBERON:0000073!2.54e-53!94;UBERON:0001016!2.54e-53!94;UBERON:0002616!1.33e-46!59;UBERON:0000955!2.50e-46!69;UBERON:0006238!2.50e-46!69;UBERON:0004121!2.93e-45!169;UBERON:0000033!2.83e-44!123;UBERON:0000924!1.46e-43!173;UBERON:0006601!1.46e-43!173;UBERON:0000153!2.37e-42!129;UBERON:0007811!2.37e-42!129;UBERON:0001893!5.18e-41!34;UBERON:0002020!5.92e-41!34;UBERON:0003528!5.92e-41!34;UBERON:0003075!4.09e-40!86;UBERON:0007284!4.09e-40!86;UBERON:0002791!1.56e-39!33;UBERON:0002780!3.88e-39!41;UBERON:0001890!3.88e-39!41;UBERON:0006240!3.88e-39!41;UBERON:0001869!6.29e-39!32;UBERON:0003080!6.59e-38!42;UBERON:0002346!1.83e-37!90;UBERON:0007023!9.72e-32!115;UBERON:0000956!5.01e-30!25;UBERON:0000203!5.01e-30!25;UBERON:0002619!6.03e-30!22;UBERON:0001950!2.87e-27!20;UBERON:0003056!3.63e-26!61;UBERON:0003076!6.83e-17!15;UBERON:0003057!6.83e-17!15;UBERON:0004733!1.77e-13!12;UBERON:0002028!1.77e-13!12;UBERON:0007277!1.77e-13!12;UBERON:0004111!7.03e-13!241;UBERON:0002420!2.13e-12!9;UBERON:0007245!2.13e-12!9;UBERON:0010009!2.13e-12!9;UBERON:0010011!2.13e-12!9;UBERON:0000454!2.13e-12!9;UBERON:0002308!3.12e-12!9;UBERON:0000125!3.12e-12!9;UBERON:0004732!3.43e-12!13;UBERON:0000475!6.13e-12!365;UBERON:0000064!2.26e-11!219;UBERON:0000025!7.92e-11!194;UBERON:0000922!8.13e-11!612;UBERON:0000200!2.83e-10!6;UBERON:0000468!2.96e-10!659;UBERON:0000062!3.43e-10!511;UBERON:0002680!9.48e-10!9;UBERON:0001895!9.48e-10!9;UBERON:0010092!9.48e-10!9;UBERON:0009663!1.11e-09!7;UBERON:0000477!1.58e-09!286;UBERON:0001871!1.87e-09!7;UBERON:0000467!2.12e-09!625;UBERON:0000480!2.51e-09!626;UBERON:0002298!9.70e-09!8;UBERON:0001872!1.23e-08!5;UBERON:0000923!1.33e-08!604;UBERON:0005291!1.33e-08!604;UBERON:0006598!1.33e-08!604;UBERON:0002532!1.33e-08!604;UBERON:0002050!1.57e-08!605;UBERON:0005423!1.57e-08!605;UBERON:0000349!2.23e-08!5;UBERON:0002021!3.31e-08!5;UBERON:0000483!5.91e-08!309;UBERON:0000119!1.07e-07!312;UBERON:0000166!4.15e-07!21;UBERON:0000481!5.58e-07!347;UBERON:0000369!9.16e-07!4;UBERON:0002435!9.16e-07!4;UBERON:0000204!9.16e-07!4;UBERON:0010082!9.16e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.88e-50;22!UBERON:0001893;2.43e-50;34!UBERON:0001869;4.35e-50;32!UBERON:0003528;6.06e-49;34!UBERON:0002020;6.06e-49;34!UBERON:0002791;1.66e-46;32!UBERON:0001950;1.67e-45;20!UBERON:0000956;6.79e-44;25!UBERON:0000203;6.79e-44;25!UBERON:0000073;1.15e-38;53!UBERON:0002616;1.15e-38;53!UBERON:0002780;2.22e-37;41!UBERON:0001890;2.22e-37;41!UBERON:0001017;1.22e-29;75!UBERON:0000955;3.27e-28;68!UBERON:0001016;1.68e-22;83!UBERON:0000200;1.07e-17;6!UBERON:0004733;1.83e-17;12!UBERON:0002028;1.83e-17;12!UBERON:0002298;4.43e-16;6!UBERON:0004732;5.70e-16;13!UBERON:0001872;1.18e-14;5!UBERON:0000349;3.71e-14;5!UBERON:0001871;4.33e-14;6!UBERON:0002420;4.37e-14;9!UBERON:0007245;4.37e-14;9!UBERON:0010009;4.37e-14;9!UBERON:0010011;4.37e-14;9!UBERON:0000454;4.37e-14;9!UBERON:0000125;8.06e-14;9!UBERON:0002308;8.06e-14;9!UBERON:0000369;4.15e-11;4!UBERON:0002435;4.15e-11;4!UBERON:0000204;4.15e-11;4!UBERON:0002680;5.37e-11;9!UBERON:0001895;5.37e-11;9!UBERON:0007023;6.41e-11;114!UBERON:0001870;7.90e-10;3!UBERON:0002021;1.08e-09;5!UBERON:0009663;1.87e-09;7!UBERON:0011216;3.13e-09;132!UBERON:0000988;4.80e-09;3!UBERON:0001896;9.91e-09;3!UBERON:0005290;9.91e-09;3!UBERON:0005383;1.40e-08;3!UBERON:0005382;1.40e-08;3!UBERON:0002702;4.41e-07;2!UBERON:0002771;5.17e-07;2!UBERON:0001876;9.74e-07;2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,3.1434978119451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,0.286804595389004,0.731842236777572,0.795178609928912,0.232387885739037,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0.439001141634502,0,0.100528972411631,2.31471112896324,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0.179117045405697,0.581267877027924,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,2.60279707715243,1.54657762555539,0.837581326671744,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,1.00726411300178,1.56768049849117,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0.495854746082934,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.470719003883896,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.8185770807552,8.29949556822025,0,0,0,0.19924798825107,0,0,0.920418142519393,0,0,0,0,0,0,0,0,12.6013256992378,42.3022527618042,1.99613798001194,0,0,0,1.70690172428249,0,0,1.03423011972439,0,0,1.77148277162768,7.71817207202611,83.9199549743958,30.8516135208117,18.3239523751199,19.9640711410115,0,1.67308493134324,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02203398942031,0,4.68528891450678,0,0,0,0,0,1.22429104652196,0.442306057399416,0,0,0,0,0,0,0,0,0,1.95984794828755,0.0870592065804026,0,0,0,0,0,1.74580229679155,0,0.677942222341597,0,0,45.2672191084533,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,3.00210144354895,0.547621515567972,0,0,0,0.837847203816763,0,0,0,0,0.223171457441873,0.604651252380536,0,0,1.73323001075892,1.64831716762333,2.15691340333392,0,0,16.6998234859954,6.81017030557878,1.76828463311521,1.2378549293751,2.07720169014593,0.2249738915515,0,30.1925296590383,1.67717343799633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,7.75697738169303,3.83474545053801,0,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,2.04170325125305,62.024772597689,57.1082919741188,33.551169429342,3.44045517414043,5.54645257684261,6.27173669707973,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.4490469003187,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,1.63814457288021,0,0,0,0,0,0,0,0,0,20.553352030867,111.940295297212,21.7102048317726,26.2548946228166,0.756215088665154,23.3059940804414,22.768066034091,0,0.785181748008205,1.41563668017288,0.366857197043358,0,0,0,0.994581110581374,0.0752103283492573,0,0,0,0,0,37.821047386301,35.929592536237,42.1641064862416,34.054290074128,4.92277328116398,0,0,0,0,0,0,0,0,0,0,0,33.6450178235317,27.6245648963966,0,0,0,8.1700106756321,0,0,0,0,0.500335809236594,0,0,0,0,0.62164849248911,1.7071847709395,0,0.430227358820278,0,0,0,0,0,0,0,0.490751168076215,0,0,0.102662806856247,0,0,0,0,0,5.30846585583112,0,0,0,0,0,0,0,3.33724394095407,0.594092800654172,5.9171801861676,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0.458729283404541,0.430018749454354,0,16.2499661556286,0.872701380680755,0.5290268405154,0,0,0,0,0,0,1.22386595690378,2.6721740526556,1.01084389488329,3.50990555009325,0,0,6.63335551567024,0.930896962757057,0.213233981900981,0,0,0,0,0,0,1.08858373948481,0.342233301085281,0.404112318087525,0.358611026963382,0.332660356546013,1.22104902916462,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@VSNL1 | |||
}} |
Revision as of 01:51, 21 January 2014
Short description: | p2@VSNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VSNL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 26bp_to_ENST00000483921_5end |
EntrezGene: | VSNL1 |
HGNC: | 12722 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.65e-10 | 8 |