FFCP PHASE1:Hg19::chr20:36889127..36889153,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85449 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29372 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JYT7,E9PFS1 | |||
|association_with_transcript=20bp_to_ENST00000279024,ENST00000373398,ENST00000496900,NM_001029864,uc002xhy.1,uc002xhz.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_KIAA1755_5end | |||
|id=chr20:36889127..36889153,- | |||
|ontology_enrichment_celltype=CL:0000055!6.61e-15!180;CL:0000183!5.16e-10!59;CL:0000680!6.56e-09!57;CL:0000056!6.56e-09!57;CL:0000355!6.56e-09!57;CL:0000187!8.26e-09!54;CL:0000393!2.49e-08!60;CL:0000211!2.49e-08!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.10e-08,55;CL:0000680,2.02e-08,58;CL:0000056,2.02e-08,58;CL:0000355,2.02e-08,58;CL:0000393,4.50e-08,61;CL:0000211,4.50e-08,61 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.24e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.03e-40!115;UBERON:0002616!7.37e-36!59;UBERON:0001049!2.50e-35!57;UBERON:0005068!2.50e-35!57;UBERON:0006241!2.50e-35!57;UBERON:0007135!2.50e-35!57;UBERON:0003075!2.47e-33!86;UBERON:0007284!2.47e-33!86;UBERON:0001017!2.52e-32!82;UBERON:0005743!8.24e-32!86;UBERON:0000955!1.81e-30!69;UBERON:0006238!1.81e-30!69;UBERON:0002346!4.61e-30!90;UBERON:0000073!3.10e-29!94;UBERON:0001016!3.10e-29!94;UBERON:0000477!1.04e-26!286;UBERON:0000025!3.78e-26!194;UBERON:0000475!8.73e-26!365;UBERON:0003080!1.23e-25!42;UBERON:0002780!3.39e-25!41;UBERON:0001890!3.39e-25!41;UBERON:0006240!3.39e-25!41;UBERON:0000119!5.42e-25!312;UBERON:0000033!1.18e-24!123;UBERON:0000153!1.31e-24!129;UBERON:0007811!1.31e-24!129;UBERON:0004111!1.16e-23!241;UBERON:0000483!1.64e-23!309;UBERON:0000481!3.39e-23!347;UBERON:0003056!4.71e-23!61;UBERON:0002020!2.24e-22!34;UBERON:0003528!2.24e-22!34;UBERON:0001893!2.80e-22!34;UBERON:0004121!8.19e-22!169;UBERON:0002791!1.19e-21!33;UBERON:0001869!9.75e-21!32;UBERON:0000924!3.26e-20!173;UBERON:0006601!3.26e-20!173;UBERON:0000956!5.83e-16!25;UBERON:0000203!5.83e-16!25;UBERON:0002619!4.24e-15!22;UBERON:0001950!9.85e-14!20;UBERON:0000468!1.72e-13!659;UBERON:0000064!1.61e-11!219;UBERON:0000467!4.07e-11!625;UBERON:0000480!6.06e-11!626;UBERON:0003076!1.08e-10!15;UBERON:0003057!1.08e-10!15;UBERON:0002385!1.59e-10!63;UBERON:0001015!1.59e-10!63;UBERON:0000383!1.59e-10!63;UBERON:0000922!3.19e-10!612;UBERON:0001134!6.18e-10!61;UBERON:0002036!6.18e-10!61;UBERON:0003082!6.18e-10!61;UBERON:0007100!2.27e-09!27;UBERON:0004732!2.88e-09!13;UBERON:0000062!3.91e-09!511;UBERON:0002050!4.18e-09!605;UBERON:0005423!4.18e-09!605;UBERON:0003103!6.41e-09!69;UBERON:0000923!8.26e-09!604;UBERON:0005291!8.26e-09!604;UBERON:0006598!8.26e-09!604;UBERON:0002532!8.26e-09!604;UBERON:0000948!1.56e-08!24;UBERON:0005498!1.56e-08!24;UBERON:0004140!1.56e-08!24;UBERON:0009881!1.56e-08!24;UBERON:0004141!1.56e-08!24;UBERON:0003084!1.56e-08!24;UBERON:0007005!1.56e-08!24;UBERON:0004139!1.56e-08!24;UBERON:0004291!1.56e-08!24;UBERON:0004733!1.70e-08!12;UBERON:0002028!1.70e-08!12;UBERON:0007277!1.70e-08!12;UBERON:0004290!2.39e-08!70;UBERON:0000914!4.89e-08!83;UBERON:0002329!4.89e-08!83;UBERON:0003077!4.89e-08!83;UBERON:0003059!4.89e-08!83;UBERON:0007282!4.89e-08!83;UBERON:0009618!4.89e-08!83;UBERON:0007285!4.89e-08!83;UBERON:0002308!6.25e-08!9;UBERON:0000125!6.25e-08!9;UBERON:0002420!1.09e-07!9;UBERON:0007245!1.09e-07!9;UBERON:0010009!1.09e-07!9;UBERON:0010011!1.09e-07!9;UBERON:0000454!1.09e-07!9;UBERON:0000479!2.59e-07!787;UBERON:0005256!3.35e-07!143;UBERON:0002298!4.61e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.69e-21;34!UBERON:0003528;2.04e-21;34!UBERON:0002020;2.04e-21;34!UBERON:0002791;3.46e-21;32!UBERON:0001869;4.51e-21;32!UBERON:0002780;1.64e-20;41!UBERON:0001890;1.64e-20;41!UBERON:0000073;1.86e-20;53!UBERON:0002616;1.86e-20;53!UBERON:0000956;8.64e-18;25!UBERON:0000203;8.64e-18;25!UBERON:0002619;7.95e-17;22!UBERON:0001950;2.75e-15;20!UBERON:0001017;4.20e-15;75!UBERON:0000955;1.53e-14;68!UBERON:0007023;2.82e-12;114!UBERON:0001016;4.62e-12;83!UBERON:0004732;3.19e-10;13!UBERON:0004733;2.36e-09;12!UBERON:0002028;2.36e-09;12!UBERON:0007100;4.26e-09;25!UBERON:0000125;9.90e-09;9!UBERON:0002308;9.90e-09;9!UBERON:0002420;1.83e-08;9!UBERON:0007245;1.83e-08;9!UBERON:0010009;1.83e-08;9!UBERON:0010011;1.83e-08;9!UBERON:0000454;1.83e-08;9!UBERON:0000948;3.46e-08;22!UBERON:0009663;4.65e-07;7!UBERON:0002680;5.94e-07;9!UBERON:0001895;5.94e-07;9!UBERON:0010314;8.21e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.93e-45,114;UBERON:0001049,4.51e-39,56;UBERON:0005068,4.51e-39,56;UBERON:0006241,4.51e-39,56;UBERON:0007135,4.51e-39,56;UBERON:0003075,3.99e-38,82;UBERON:0007284,3.99e-38,82;UBERON:0000073,1.95e-36,53;UBERON:0002616,1.95e-36,53;UBERON:0001017,5.34e-35,81;UBERON:0002346,9.20e-35,86;UBERON:0000955,3.25e-33,68;UBERON:0006238,3.25e-33,68;UBERON:0010314,1.73e-32,132;UBERON:0001016,1.75e-31,89;UBERON:0002780,3.61e-28,41;UBERON:0001890,3.61e-28,41;UBERON:0003080,3.61e-28,41;UBERON:0006240,3.61e-28,41;UBERON:0010371,6.67e-28,104;UBERON:0003528,5.41e-25,34;UBERON:0002020,5.41e-25,34;UBERON:0003056,6.05e-25,61;UBERON:0001893,6.97e-25,34;UBERON:0000025,5.02e-24,192;UBERON:0002791,2.73e-23,32;UBERON:0001869,3.80e-23,32;UBERON:0000119,2.29e-22,309;UBERON:0004111,2.17e-21,240;UBERON:0004121,2.53e-21,171;UBERON:0000924,2.53e-21,171;UBERON:0006601,2.53e-21,171;UBERON:0000483,7.13e-21,306;UBERON:0000956,9.11e-18,25;UBERON:0000203,9.11e-18,25;UBERON:0002619,8.52e-17,22;UBERON:0011216,5.13e-16,223;UBERON:0001950,2.94e-15,20;UBERON:0003076,7.71e-12,15;UBERON:0003057,7.71e-12,15;UBERON:0004732,3.11e-10,13;UBERON:0002385,3.75e-10,64;UBERON:0001015,3.75e-10,64;UBERON:0000383,3.75e-10,64;UBERON:0000923,8.12e-10,560;UBERON:0010316,8.12e-10,560;UBERON:0005291,8.12e-10,560;UBERON:0006598,8.12e-10,560;UBERON:0010317,8.12e-10,560;UBERON:0002532,8.12e-10,560;UBERON:0007100,8.23e-10,27;UBERON:0002050,9.80e-10,564;UBERON:0001134,1.61e-09,62;UBERON:0002036,1.61e-09,62;UBERON:0003082,1.61e-09,62;UBERON:0005423,2.21e-09,581;UBERON:0000922,2.26e-09,592;UBERON:0004733,2.30e-09,12;UBERON:0002028,2.30e-09,12;UBERON:0007277,2.30e-09,12;UBERON:0000948,7.19e-09,24;UBERON:0005498,7.19e-09,24;UBERON:0004140,7.19e-09,24;UBERON:0009881,7.19e-09,24;UBERON:0004141,7.19e-09,24;UBERON:0003084,7.19e-09,24;UBERON:0007005,7.19e-09,24;UBERON:0004139,7.19e-09,24;UBERON:0004291,7.19e-09,24;UBERON:0000479,7.56e-09,773;UBERON:0000125,9.90e-09,9;UBERON:0002308,9.90e-09,9;UBERON:0003103,1.69e-08,68;UBERON:0002420,1.84e-08,9;UBERON:0007245,1.84e-08,9;UBERON:0010009,1.84e-08,9;UBERON:0010011,1.84e-08,9;UBERON:0000454,1.84e-08,9;UBERON:0007524,1.76e-07,73;UBERON:0003077,2.01e-07,72;UBERON:0007285,2.01e-07,72;UBERON:0007503,4.52e-07,78;UBERON:0009663,4.70e-07,7;UBERON:0002329,5.42e-07,71;UBERON:0003059,5.42e-07,71;UBERON:0007282,5.42e-07,71;UBERON:0004290,5.42e-07,71;UBERON:0009618,5.42e-07,71;UBERON:0002680,5.73e-07,9;UBERON:0001895,5.73e-07,9;UBERON:0010092,5.73e-07,9 | |||
|phase1_expression=1.45342703416445,0.642301571672949,2.25527046553554,4.00293193412522,2.68176656656373,3.48935409640147,0,2.52687949370732,0.783556884599516,1.96587149201207,0,0,0.263766978228454,0.866364470720326,1.32558950291166,0,0.602694528023977,1.46062018077475,0.487932798790507,13.912679562677,19.7880670506925,8.14982275843028,5.15224776835902,5.74872585306114,14.9395741117815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,43.8852359365131,41.5834533016254,1.91793842765295,0.722878304769133,4.51204119572301,1.01392563272577,31.811437882044,53.5298357332899,32.9926511902597,59.4234785199671,57.7952889860769,12.9014389365247,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0.208994966536811,0,0,0.66944122552934,0,0,0,0,0,0,0.22452937262617,0.450445921933289,0,0,0.366403487860815,0,0,0,0.993943903390637,9.75054939817264,2.91300197789081,17.4970338656776,6.02936249737207,1.68203280042692,17.0798393167528,7.64669400093196,9.64754209739275,1.61652806483626,2.12500474047496,33.4499915095298,54.1605369011199,1.17160715916898,0.624320153660641,0,0.747243402759005,0.469737994575059,0.647491777472526,0,0.204154171254893,1.96534907698829,1.85986406116378,1.18800285728205,7.41800787835671,5.46096817162816,5.03032699271367,0.505008341862199,4.00379263590285,0,0.438977620880838,0.919463387397059,8.26309323986282,1.24775401476023,0.538168907066586,0.213557388818567,0.847727604638247,0.900273288253207,0.92747276314595,3.09168648054755,1.11670113798954,0.337552664482532,1.07180705677318,5.3011092591264,1.47279837827679,16.6495438523376,2.4850671476163,0.604512589365842,2.7129694769678,0,0,0,0.731842236777572,0.530119073285941,1.39432731443422,3.93912009058408,0.756962552626885,0.36497735907583,0,0,1.38134921352481,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,12.6217596423101,4.115740113314,7.3504355692771,1.26755034821831,0,4.13552934676983,0,0.245976877086227,6.00487336044839,0.109750285408626,0,0,0,0,0,7.21656710126366,2.78232971940184,36.9837386842838,0,0,0,0,0,0,0.936017060556951,0.743155811443641,0,0,0,0,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0.50496973370552,0.825472625798197,3.81988425558278,1.17217447210047,0,2.36503233217644,3.30377363628309,0.571652865261156,50.346856871067,211.004673315308,21.7081326030012,1.16344544182,3.57656445851882,2.535908257668,3.72313363218819,3.12022310734098,1.80045161983499,1.41849132023278,4.26275486425759,0.142977993658148,0,0.823240336780769,2.28015329005615,0,0,0,0,0,0,0,0,17.7322393063771,9.18895486672911,21.3955357561078,0.868687840005475,1.02738161275192,1.25342674267927,0,0,0,0,1.01637849688985,6.50699269288109,3.09315525111078,1.84267891867784,3.18969375826582,0,0,0,0.613457458595699,10.5035809422532,1.35632511849868,14.9739020302181,2.14114786556594,1.10391690523754,7.49705055953364,7.52365249319297,25.0148254461583,11.3820378421755,3.98535359121262,3.31864503375066,1.82455590382974,70.2926155291239,121.815915452854,0,0,0,0,0,0,3.2254015016441,2.14846762603287,1.40330047216537,2.17836553734692,3.58195074346692,3.21707842287215,0,9.86942040336996,13.6722528491108,4.18848495670427,10.3850885836724,7.08883308605751,0,0,0,0.34444334449382,0.546273504020151,2.88473712910733,0.451199612907412,0.539107359730903,7.0591479225917,1.46139224653261,0.211103257785751,0,0,2.15915916102139,4.62681758070868,7.04460737614017,10.0337954770971,0.764628819135115,1.66215201785745,2.23874754722178,0,0,0,0.984043937099117,0.325378394664303,2.98818933778395,0,0,0,0,0,15.5639856450316,1.3864375540318,2.45605879561807,2.06754858726796,1.82614416276065,3.48040065394148,2.13066568540252,13.2657733113639,0,0,0,0,1.39453664789186,1.25924938732256,0,17.249880489861,17.5660990004617,2.60979897622522,2.7798632865588,17.6043610692649,6.69885064847401,68.3379557392448,12.7722229928963,2.81487570442467,5.99114583247489,7.63687795022248,14.9140241637854,0,1.09814811894422,0.235624804691373,17.7920583784518,1.58510321173008,3.37006764991185,0,30.4641862039106,2.11300293513511,3.54899769660763,1.1312434556297,20.3414609916437,18.7464216805682,15.9225354057893,12.7150756723591,7.52408194546694,13.7737897929793,0.405820753925408,1.8589409885985,4.22543403798362,0.286822704408103,0,0,1.06428319221179,3.58882980006029,14.8182701831956,0.379473173765715,3.49934720244983,0,0.670302275535787,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59286806723523,0,0,0,0,0,0,27.8361341374563,55.0017418165105,0,0,0,22.3157746841198,19.3398740871803,0,0,0,3.73247505194169,0,0,0,10.7521312144258,0,0,74.6386214493318,37.1072392647405,3.99227596002388,0,0,13.7749919332611,0,0,0,0,0,0,59.3446728495272,34.8523707627429,10.6807215421958,20.5677423472078,19.5061428509341,14.2600508150082,0,0,29.6258495239619,0,0,0,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9052386215701,8.93421401483726,21.3860550726769,0,0,0,154.28119339277,23.2747517716649,70.5135981633271,0,0,0,14.9942073082768,16.9387002468129,7.03967351750127,32.4779019290428,0,0,0,0,0,0,0,1.24807205711825,0,0,0,16.9484868194769,0,0,0,0,8.14707738502723,0,16.7225748177594,0,0,33.934586632351,0,0,15.5820686159727,0,0,0,0.171594997861965,0,0,0,0,0,0,0,109.876912833891,104.321898715699,0,0,0,49.432985025189,37.3531491139044,25.1255558601885,4.3929380109778,7.72606886645828,5.80245789348869,10.7493555978762,4.68389848605125,4.65983798109815,0.157566364614447,0.164831716762333,0.13480708770837,0,0,46.1233220089396,62.5173634052132,0,0.275078873194468,0,0,0,33.5337552752296,0,7.17131936422703,4.30127622706984,0,0,0,19.2967738120809,4.63464379255802,0,0,0,0.979762080328227,1.19730191562487,0,0,5.09904411840566,0,1.32506888912221,104.331345783771,64.9262074556608,0,0,3.63077202730162,4.55892484789031,6.62782488555513,5.95399226174341,0,0,0,0,1.0027595760908,0.919036730290385,0.327872630709804,0,25.6959772190426,38.6823259739223,50.3267541440129,59.0611471560773,60.4563330875845,86.9970605208782,0.138348634936231,0.37494122388632,1.36484205787483,22.5517613500524,49.6410879563142,0,0,3.28360566351123,6.31025936587506,5.54805861502613,0.568209015825267,2.51567901752575,15.1267907671411,0.457680136793847,5.74677510300308,16.3209060611919,2.36568239983414,0,2.69881867298163,1.39736661188633,25.711784886133,2.65841714557995,15.1306067925403,0.300515217994437,0,0,1.45478927362048,0.644463342254931,4.17630383890644,11.9428766609585,5.200360940621,2.40376993627955,2.69399591012735,27.7606776103032,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,64.2901728105548,0.194860308839388,0,0.654261577023377,0,0,0,0,0,0,17.5929945605719,0,0,0,1.66262682694747,0,0,0,0,0,0,0,3.18004350653419,0,0,1.05802783107205,2.1437183414724,48.6857526231163,32.5902125548845,63.2150081866319,53.5353710668371,5.5455773168778,35.4085132616796,51.1877796652968,235.569543427605,0,0,0,0,0.381382095467167,0,0,12.560124834326,0,0,0,0.327543835020193,0.295712172434091,34.6467809092365,42.9592954237616,51.8783859217972,44.4544829459287,12.580420607419,3.28954660114309,31.2613042385255,0,0,6.42842203053944,5.04425583328236,3.03482802118316,3.87025725297206,0.0887023701626388,0,0.171488009437418,56.6187875697008,34.7937972147472,0,0,14.5997152701956,34.0940830117724,0,41.0921424229273,0,0,32.021491791142,0,0,0,14.4308045651446,0,0.17071847709395,0.691259661814092,7.744092458765,0.236664001461131,0.0852134047591577,9.31451510420044,0,0,0,0,0,0,1.29485767437579,2.36124455769368,20.8766597640876,9.22850886812365,0,0.198950775161368,0.118920090777569,0,81.5758634251084,0,4.63044948647668,7.6495846176385,0,13.2380093747109,0,92.4612880111392,64.4590688709777,79.4592767856792,3.73839652313197,2.16163011353663,3.41626806259959,0,0,0,0,10.2247094354512,11.4682320851135,81.1302040637214,0,47.5260516434494,5.67255897442491,11.1095636508234,5.57992527250127,6.47045880083986,2.59575937274273,0,0,0,0,0,0,0,9.85123076837112,3.21556956187414,91.2086383404657,109.638975613609,11.301401040752,14.7599947507519,0.645889098360061,3.22788514338461,0.224263725161227,3.30965223046457,7.27621880249589,8.49095316798149,4.44903291410865,5.32081218815241,4.73366555591664,22.9535646016749,0,0,13.5150597600858,0,4.69281884806909,28.7267393829736,22.3792898073656,15.3124058062668,12.8815227898257,0 | |||
|short_description=p1@KIAA1755 | |||
}} |
Revision as of 11:12, 21 January 2014
Short description: | p1@KIAA1755 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA1755_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 20bp_to_ENST00000279024, ENST00000373398, ENST00000496900, NM_001029864, uc002xhy.1, uc002xhz.1_5end |
EntrezGene: | KIAA1755 |
HGNC: | 29372 |
UniProt: | Q5JYT7E9PFS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.10e-08 | 55 |
muscle precursor cell | 2.02e-08 | 58 |
myoblast | 2.02e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.02e-08 | 58 |
electrically responsive cell | 4.50e-08 | 61 |
electrically active cell | 4.50e-08 | 61 |