FFCP PHASE1:Hg19::chr22:50523729..50523747,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:50523729..50523747,- to FFCP PHASE1:Hg19::chr22:50523729..50523747,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23209 | |EntrezGene=23209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17082 | |HGNC=17082 | ||
|TSSclassifier=strong | |||
|UniProt=Q15049 | |UniProt=Q15049 | ||
|association_with_transcript=33bp_to_NM_139202,uc003bjg.1,uc011arl.1_5end | |||
|cluster_id=chr22:50523729..50523747,- | |||
|coexpression_cluster_id=C2650 | |||
|description=CAGE_peak_3_at_MLC1_5end | |||
|id=chr22:50523729..50523747,- | |||
|ontology_enrichment_celltype=CL:0000128!1.05e-07!7;CL:0000126!1.05e-07!7;CL:0000127!1.05e-07!7;CL:0002453!1.05e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;4.11e-07;7!CL:0000126;4.11e-07;7!CL:0000127;4.11e-07;7!CL:0002605;7.60e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,4.25e-07,7;CL:0000126,4.25e-07,7;CL:0000127,4.25e-07,7;CL:0002453,4.25e-07,7;CL:0002605,8.51e-07,3;CL:0000047,9.03e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.51e-16;82!UBERON:0006215;8.80e-08;3!UBERON:0006241;2.01e-07;3!UBERON:0003057;2.01e-07;3 | |||
|ontology_enrichment_disease=DOID:1240!3.44e-24!39;DOID:8692!4.51e-24!31;DOID:2531!8.39e-18!51;DOID:0060083!8.39e-18!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.84e-24;31!DOID:1240;2.83e-16;39!DOID:2531;9.26e-10;51!DOID:0060083;9.26e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.65e-24,31;DOID:1240,4.15e-20,39;DOID:2531,6.24e-14,51;DOID:0060083,6.24e-14,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.61e-73!57;UBERON:0005068!3.61e-73!57;UBERON:0006241!3.61e-73!57;UBERON:0007135!3.61e-73!57;UBERON:0001017!3.07e-72!82;UBERON:0005743!4.08e-70!86;UBERON:0000073!8.59e-68!94;UBERON:0001016!8.59e-68!94;UBERON:0002616!3.18e-61!59;UBERON:0000955!4.98e-61!69;UBERON:0006238!4.98e-61!69;UBERON:0002780!4.82e-55!41;UBERON:0001890!4.82e-55!41;UBERON:0006240!4.82e-55!41;UBERON:0003080!1.97e-53!42;UBERON:0001893!2.94e-51!34;UBERON:0002020!5.90e-51!34;UBERON:0003528!5.90e-51!34;UBERON:0002346!1.02e-50!90;UBERON:0002791!8.52e-50!33;UBERON:0001869!3.79e-48!32;UBERON:0003075!5.05e-48!86;UBERON:0007284!5.05e-48!86;UBERON:0000956!4.60e-37!25;UBERON:0000203!4.60e-37!25;UBERON:0003056!1.49e-34!61;UBERON:0007023!7.45e-34!115;UBERON:0002619!5.07e-33!22;UBERON:0000924!8.26e-33!173;UBERON:0006601!8.26e-33!173;UBERON:0004121!1.42e-30!169;UBERON:0000033!1.70e-30!123;UBERON:0001950!1.26e-29!20;UBERON:0000153!2.38e-29!129;UBERON:0007811!2.38e-29!129;UBERON:0003076!6.56e-20!15;UBERON:0003057!6.56e-20!15;UBERON:0004732!1.32e-16!13;UBERON:0002420!9.66e-16!9;UBERON:0007245!9.66e-16!9;UBERON:0010009!9.66e-16!9;UBERON:0010011!9.66e-16!9;UBERON:0000454!9.66e-16!9;UBERON:0004733!1.59e-15!12;UBERON:0002028!1.59e-15!12;UBERON:0007277!1.59e-15!12;UBERON:0002308!4.26e-15!9;UBERON:0000125!4.26e-15!9;UBERON:0000025!2.97e-14!194;UBERON:0009663!2.20e-12!7;UBERON:0002680!5.65e-11!9;UBERON:0001895!5.65e-11!9;UBERON:0010092!5.65e-11!9;UBERON:0001871!5.92e-11!7;UBERON:0000200!1.09e-10!6;UBERON:0004111!2.32e-10!241;UBERON:0002298!4.87e-10!8;UBERON:0000349!6.24e-10!5;UBERON:0001872!6.32e-09!5;UBERON:0002021!1.10e-08!5;UBERON:0000369!4.05e-08!4;UBERON:0002435!4.05e-08!4;UBERON:0000204!4.05e-08!4;UBERON:0010082!4.05e-08!4;UBERON:0000477!1.29e-07!286;UBERON:0002037!5.04e-07!6;UBERON:0006215!5.04e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.18e-57;34!UBERON:0003528;1.06e-56;34!UBERON:0002020;1.06e-56;34!UBERON:0001869;2.09e-56;32!UBERON:0002791;2.30e-56;32!UBERON:0002780;1.08e-50;41!UBERON:0001890;1.08e-50;41!UBERON:0000073;1.82e-49;53!UBERON:0002616;1.82e-49;53!UBERON:0000956;4.63e-48;25!UBERON:0000203;4.63e-48;25!UBERON:0002619;9.79e-43;22!UBERON:0001950;2.73e-38;20!UBERON:0001017;2.59e-34;75!UBERON:0000955;2.98e-34;68!UBERON:0001016;4.91e-30;83!UBERON:0002420;5.26e-20;9!UBERON:0007245;5.26e-20;9!UBERON:0010009;5.26e-20;9!UBERON:0010011;5.26e-20;9!UBERON:0000454;5.26e-20;9!UBERON:0000125;3.55e-19;9!UBERON:0002308;3.55e-19;9!UBERON:0004732;3.65e-18;13!UBERON:0004733;9.59e-17;12!UBERON:0002028;9.59e-17;12!UBERON:0009663;1.21e-15;7!UBERON:0000200;1.79e-13;6!UBERON:0002298;5.93e-13;6!UBERON:0000349;1.88e-12;5!UBERON:0001871;8.27e-12;6!UBERON:0001872;3.76e-11;5!UBERON:0002680;4.99e-11;9!UBERON:0001895;4.99e-11;9!UBERON:0002021;8.05e-11;5!UBERON:0007023;1.28e-10;114!UBERON:0011216;1.43e-10;132!UBERON:0000369;4.24e-10;4!UBERON:0002435;4.24e-10;4!UBERON:0000204;4.24e-10;4!UBERON:0002784;9.88e-09;4!UBERON:0005383;4.09e-08;3!UBERON:0005382;4.09e-08;3!UBERON:0001896;9.72e-08;3!UBERON:0005290;9.72e-08;3!UBERON:0001870;1.37e-07;3!UBERON:0001894;1.90e-07;7!UBERON:0002240;2.01e-07;3!UBERON:0005174;2.01e-07;3!UBERON:0001137;2.01e-07;3!UBERON:0000988;6.92e-07;3!UBERON:0010314;9.72e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.85e-94,56;UBERON:0005068,2.85e-94,56;UBERON:0006241,2.85e-94,56;UBERON:0007135,2.85e-94,56;UBERON:0001017,2.49e-89,81;UBERON:0000073,4.56e-88,53;UBERON:0002616,4.56e-88,53;UBERON:0001016,9.30e-87,89;UBERON:0000955,4.57e-77,68;UBERON:0006238,4.57e-77,68;UBERON:0002780,9.01e-72,41;UBERON:0001890,9.01e-72,41;UBERON:0003080,9.01e-72,41;UBERON:0006240,9.01e-72,41;UBERON:0001893,1.61e-66,34;UBERON:0003528,4.00e-66,34;UBERON:0002020,4.00e-66,34;UBERON:0002346,2.02e-63,86;UBERON:0001869,1.86e-62,32;UBERON:0002791,2.11e-62,32;UBERON:0003075,4.47e-62,82;UBERON:0007284,4.47e-62,82;UBERON:0000956,5.53e-48,25;UBERON:0000203,5.53e-48,25;UBERON:0003056,6.55e-47,61;UBERON:0010371,1.02e-45,104;UBERON:0002619,1.04e-42,22;UBERON:0004121,4.42e-40,171;UBERON:0000924,4.42e-40,171;UBERON:0006601,4.42e-40,171;UBERON:0001950,2.84e-38,20;UBERON:0010314,5.54e-36,132;UBERON:0007023,1.08e-32,114;UBERON:0011216,1.36e-27,223;UBERON:0003076,2.14e-22,15;UBERON:0003057,2.14e-22,15;UBERON:0002420,5.21e-20,9;UBERON:0007245,5.21e-20,9;UBERON:0010009,5.21e-20,9;UBERON:0010011,5.21e-20,9;UBERON:0000454,5.21e-20,9;UBERON:0000125,3.59e-19,9;UBERON:0002308,3.59e-19,9;UBERON:0000025,8.30e-19,192;UBERON:0004732,3.40e-18,13;UBERON:0004733,8.65e-17,12;UBERON:0002028,8.65e-17,12;UBERON:0007277,8.65e-17,12;UBERON:0009663,1.22e-15,7;UBERON:0000200,1.97e-13,6;UBERON:0002298,5.75e-13,6;UBERON:0000349,1.90e-12,5;UBERON:0004111,3.37e-12,240;UBERON:0001871,8.20e-12,6;UBERON:0001872,3.85e-11,5;UBERON:0002680,4.57e-11,9;UBERON:0001895,4.57e-11,9;UBERON:0010092,4.57e-11,9;UBERON:0002021,7.89e-11,5;UBERON:0000369,4.29e-10,4;UBERON:0002435,4.29e-10,4;UBERON:0000204,4.29e-10,4;UBERON:0010082,4.29e-10,4;UBERON:0002784,9.78e-09,4;UBERON:0005383,4.09e-08,3;UBERON:0005382,4.09e-08,3;UBERON:0001896,9.62e-08,3;UBERON:0005290,9.62e-08,3;UBERON:0010096,9.62e-08,3;UBERON:0001870,1.40e-07,3;UBERON:0001894,1.80e-07,7;UBERON:0006222,1.80e-07,7;UBERON:0002240,2.03e-07,3;UBERON:0005174,2.03e-07,3;UBERON:0001137,2.03e-07,3;UBERON:0000483,3.28e-07,306;UBERON:0000119,5.09e-07,309;UBERON:0000988,6.78e-07,3 | |||
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| ||
|short_description=p3@MLC1 | |||
}} | }} |
Latest revision as of 18:23, 15 September 2015
Short description: | p3@MLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MLC1_5end |
Coexpression cluster: | C2650_Neural_hippocampus_amygdala_parietal_middle_medial_caudate |
Association with transcript: | 33bp_to_NM_139202, uc003bjg.1, uc011arl.1_5end |
EntrezGene: | MLC1 |
HGNC: | 17082 |
UniProt: | Q15049 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 4.25e-07 | 7 |
macroglial cell | 4.25e-07 | 7 |
astrocyte | 4.25e-07 | 7 |
oligodendrocyte precursor cell | 4.25e-07 | 7 |
astrocyte of the cerebral cortex | 8.51e-07 | 3 |
neuronal stem cell | 9.03e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.65e-24 | 31 |
leukemia | 4.15e-20 | 39 |
hematologic cancer | 6.24e-14 | 51 |
immune system cancer | 6.24e-14 | 51 |