FFCP PHASE1:Hg19::chr22:50523807..50523826,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:50523807..50523826,- to FFCP PHASE1:Hg19::chr22:50523807..50523826,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23209 | |EntrezGene=23209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17082 | |HGNC=17082 | ||
|TSSclassifier=strong | |||
|UniProt=A6PVC3,F5H1B9 | |UniProt=A6PVC3,F5H1B9 | ||
|association_with_transcript=0bp_to_ENST00000442311,ENST00000538737_5end | |||
|cluster_id=chr22:50523807..50523826,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_MLC1_5end | |||
|id=chr22:50523807..50523826,- | |||
|ontology_enrichment_celltype=CL:0000763!5.80e-11!112;CL:0000049!5.80e-11!112;CL:0000128!4.11e-07!7;CL:0000126!4.11e-07!7;CL:0000127!4.11e-07!7;CL:0002453!4.11e-07!7;CL:0002032!8.26e-07!165;CL:0000837!8.26e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000128;2.05e-07;7!CL:0000126;2.05e-07;7!CL:0000127;2.05e-07;7!CL:0002605;4.10e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.08e-07,7;CL:0000126,2.08e-07,7;CL:0000127,2.08e-07,7;CL:0002453,2.08e-07,7;CL:0002605,4.19e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.65e-17;82!UBERON:0006241;9.94e-08;3!UBERON:0003057;9.94e-08;3!UBERON:0006215;1.21e-07;3 | |||
|ontology_enrichment_disease=DOID:8692!1.27e-19!31;DOID:1240!1.38e-19!39;DOID:2531!5.83e-14!51;DOID:0060083!5.83e-14!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.21e-15;31!DOID:1240;2.60e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.61e-15,31;DOID:1240,1.41e-12,39;DOID:2531,1.50e-08,51;DOID:0060083,1.50e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.45e-64!82;UBERON:0001049!2.11e-64!57;UBERON:0005068!2.11e-64!57;UBERON:0006241!2.11e-64!57;UBERON:0007135!2.11e-64!57;UBERON:0005743!1.55e-62!86;UBERON:0000073!3.81e-60!94;UBERON:0001016!3.81e-60!94;UBERON:0002616!1.99e-55!59;UBERON:0000955!9.20e-55!69;UBERON:0006238!9.20e-55!69;UBERON:0002780!2.28e-48!41;UBERON:0001890!2.28e-48!41;UBERON:0006240!2.28e-48!41;UBERON:0003080!6.88e-47!42;UBERON:0001893!3.00e-45!34;UBERON:0002346!4.80e-45!90;UBERON:0002020!5.00e-45!34;UBERON:0003528!5.00e-45!34;UBERON:0002791!7.04e-44!33;UBERON:0001869!1.33e-42!32;UBERON:0003075!2.86e-41!86;UBERON:0007284!2.86e-41!86;UBERON:0000956!1.09e-32!25;UBERON:0000203!1.09e-32!25;UBERON:0003056!1.36e-29!61;UBERON:0002619!5.73e-29!22;UBERON:0000924!5.90e-28!173;UBERON:0006601!5.90e-28!173;UBERON:0007023!1.17e-27!115;UBERON:0001950!5.39e-26!20;UBERON:0004121!3.31e-25!169;UBERON:0000033!7.69e-25!123;UBERON:0000153!1.11e-24!129;UBERON:0007811!1.11e-24!129;UBERON:0003076!6.94e-18!15;UBERON:0003057!6.94e-18!15;UBERON:0004732!7.73e-15!13;UBERON:0002420!5.31e-14!9;UBERON:0007245!5.31e-14!9;UBERON:0010009!5.31e-14!9;UBERON:0010011!5.31e-14!9;UBERON:0000454!5.31e-14!9;UBERON:0004733!7.10e-14!12;UBERON:0002028!7.10e-14!12;UBERON:0007277!7.10e-14!12;UBERON:0002308!1.30e-13!9;UBERON:0000125!1.30e-13!9;UBERON:0009663!3.98e-11!7;UBERON:0002680!6.83e-10!9;UBERON:0001895!6.83e-10!9;UBERON:0010092!6.83e-10!9;UBERON:0000200!2.37e-09!6;UBERON:0001871!2.41e-09!7;UBERON:0002298!5.10e-09!8;UBERON:0000349!6.50e-09!5;UBERON:0000025!7.02e-09!194;UBERON:0001872!4.94e-08!5;UBERON:0002021!6.67e-08!5;UBERON:0000369!2.33e-07!4;UBERON:0002435!2.33e-07!4;UBERON:0000204!2.33e-07!4;UBERON:0010082!2.33e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.16e-58;34!UBERON:0003528;2.04e-57;34!UBERON:0002020;2.04e-57;34!UBERON:0001869;3.40e-57;32!UBERON:0002791;5.32e-57;32!UBERON:0002780;2.59e-51;41!UBERON:0001890;2.59e-51;41!UBERON:0000073;5.55e-50;53!UBERON:0002616;5.55e-50;53!UBERON:0000956;1.91e-48;25!UBERON:0000203;1.91e-48;25!UBERON:0002619;7.48e-43;22!UBERON:0001950;2.15e-38;20!UBERON:0000955;8.39e-35;68!UBERON:0001017;8.55e-35;75!UBERON:0001016;1.93e-30;83!UBERON:0002420;3.82e-20;9!UBERON:0007245;3.82e-20;9!UBERON:0010009;3.82e-20;9!UBERON:0010011;3.82e-20;9!UBERON:0000454;3.82e-20;9!UBERON:0000125;1.44e-19;9!UBERON:0002308;1.44e-19;9!UBERON:0004732;1.71e-18;13!UBERON:0004733;4.58e-17;12!UBERON:0002028;4.58e-17;12!UBERON:0009663;7.57e-16;7!UBERON:0002298;2.75e-13;6!UBERON:0000200;3.41e-13;6!UBERON:0000349;1.56e-12;5!UBERON:0001871;1.33e-11;6!UBERON:0007023;1.47e-11;114!UBERON:0002680;2.68e-11;9!UBERON:0001895;2.68e-11;9!UBERON:0001872;3.17e-11;5!UBERON:0002021;4.91e-11;5!UBERON:0011216;1.25e-10;132!UBERON:0000369;3.12e-10;4!UBERON:0002435;3.12e-10;4!UBERON:0000204;3.12e-10;4!UBERON:0002784;1.49e-08;4!UBERON:0005383;4.08e-08;3!UBERON:0005382;4.08e-08;3!UBERON:0001896;8.99e-08;3!UBERON:0005290;8.99e-08;3!UBERON:0002240;9.94e-08;3!UBERON:0005174;9.94e-08;3!UBERON:0001137;9.94e-08;3!UBERON:0001870;1.65e-07;3!UBERON:0001894;1.68e-07;7!UBERON:0000988;3.50e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.38e-95,56;UBERON:0005068,1.38e-95,56;UBERON:0006241,1.38e-95,56;UBERON:0007135,1.38e-95,56;UBERON:0001017,1.54e-90,81;UBERON:0000073,4.40e-89,53;UBERON:0002616,4.40e-89,53;UBERON:0001016,5.91e-88,89;UBERON:0000955,4.80e-78,68;UBERON:0006238,4.80e-78,68;UBERON:0002780,1.74e-72,41;UBERON:0001890,1.74e-72,41;UBERON:0003080,1.74e-72,41;UBERON:0006240,1.74e-72,41;UBERON:0002346,4.75e-69,86;UBERON:0001893,2.81e-67,34;UBERON:0003528,6.05e-67,34;UBERON:0002020,6.05e-67,34;UBERON:0003075,2.13e-65,82;UBERON:0007284,2.13e-65,82;UBERON:0001869,2.64e-63,32;UBERON:0002791,4.89e-63,32;UBERON:0003056,8.67e-50,61;UBERON:0000956,2.04e-48,25;UBERON:0000203,2.04e-48,25;UBERON:0010371,2.81e-48,104;UBERON:0004121,1.74e-43,171;UBERON:0000924,1.74e-43,171;UBERON:0006601,1.74e-43,171;UBERON:0002619,7.81e-43,22;UBERON:0001950,2.27e-38,20;UBERON:0010314,1.68e-36,132;UBERON:0007023,4.45e-36,114;UBERON:0011216,4.51e-28,223;UBERON:0003076,6.06e-23,15;UBERON:0003057,6.06e-23,15;UBERON:0002420,3.91e-20,9;UBERON:0007245,3.91e-20,9;UBERON:0010009,3.91e-20,9;UBERON:0010011,3.91e-20,9;UBERON:0000454,3.91e-20,9;UBERON:0000125,1.48e-19,9;UBERON:0002308,1.48e-19,9;UBERON:0004732,1.69e-18,13;UBERON:0000025,2.93e-18,192;UBERON:0004733,4.62e-17,12;UBERON:0002028,4.62e-17,12;UBERON:0007277,4.62e-17,12;UBERON:0009663,7.74e-16,7;UBERON:0002298,2.84e-13,6;UBERON:0000200,3.45e-13,6;UBERON:0000349,1.55e-12,5;UBERON:0004111,8.46e-12,240;UBERON:0001871,1.38e-11,6;UBERON:0002680,2.66e-11,9;UBERON:0001895,2.66e-11,9;UBERON:0010092,2.66e-11,9;UBERON:0001872,3.18e-11,5;UBERON:0002021,4.96e-11,5;UBERON:0000369,3.20e-10,4;UBERON:0002435,3.20e-10,4;UBERON:0000204,3.20e-10,4;UBERON:0010082,3.20e-10,4;UBERON:0002784,1.70e-08,4;UBERON:0005383,4.18e-08,3;UBERON:0005382,4.18e-08,3;UBERON:0001896,9.20e-08,3;UBERON:0005290,9.20e-08,3;UBERON:0010096,9.20e-08,3;UBERON:0002240,9.83e-08,3;UBERON:0005174,9.83e-08,3;UBERON:0001137,9.83e-08,3;UBERON:0001870,1.63e-07,3;UBERON:0001894,1.83e-07,7;UBERON:0006222,1.83e-07,7;UBERON:0000483,2.19e-07,306;UBERON:0000119,3.42e-07,309;UBERON:0000988,3.54e-07,3 | |||
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| ||
|short_description=p2@MLC1 | |||
}} | }} |
Latest revision as of 18:27, 15 September 2015
Short description: | p2@MLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MLC1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000442311, ENST00000538737_5end |
EntrezGene: | MLC1 |
HGNC: | 17082 |
UniProt: | A6PVC3F5H1B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.08e-07 | 7 |
macroglial cell | 2.08e-07 | 7 |
astrocyte | 2.08e-07 | 7 |
oligodendrocyte precursor cell | 2.08e-07 | 7 |
astrocyte of the cerebral cortex | 4.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.61e-15 | 31 |
leukemia | 1.41e-12 | 39 |
hematologic cancer | 1.50e-08 | 51 |
immune system cancer | 1.50e-08 | 51 |