FFCP PHASE1:Hg19::chr1:1361448..1361475,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:1361448..1361475,+ to FFCP PHASE1:Hg19::chr1:1361448..1361475,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=643965 | |EntrezGene=643965 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37099 | |HGNC=37099 | ||
|TSSclassifier=strong | |||
|UniProt=A6NKF7 | |UniProt=A6NKF7 | ||
|association_with_transcript=-32bp_to_NM_001146685,uc010nyp.1_5end | |||
|cluster_id=chr1:1361448..1361475,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_TMEM88B_5end | |||
|id=chr1:1361448..1361475,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.89e-08!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.73e-19;82!UBERON:0006241;1.05e-10;3!UBERON:0003057;1.05e-10;3!UBERON:0006215;2.04e-09;3!UBERON:0002532;1.68e-07;206!UBERON:0010316;1.68e-07;206!UBERON:0010122;3.45e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.09e-59!57;UBERON:0005068!3.09e-59!57;UBERON:0006241!3.09e-59!57;UBERON:0007135!3.09e-59!57;UBERON:0001017!1.53e-50!82;UBERON:0005743!2.48e-49!86;UBERON:0002616!2.59e-48!59;UBERON:0000073!2.31e-45!94;UBERON:0001016!2.31e-45!94;UBERON:0002780!7.00e-44!41;UBERON:0001890!7.00e-44!41;UBERON:0006240!7.00e-44!41;UBERON:0000955!2.52e-43!69;UBERON:0006238!2.52e-43!69;UBERON:0003075!2.54e-43!86;UBERON:0007284!2.54e-43!86;UBERON:0003080!1.34e-42!42;UBERON:0002020!4.23e-41!34;UBERON:0003528!4.23e-41!34;UBERON:0001893!4.79e-41!34;UBERON:0002346!1.04e-40!90;UBERON:0002791!2.39e-39!33;UBERON:0007023!2.91e-38!115;UBERON:0001869!2.46e-37!32;UBERON:0003056!1.66e-29!61;UBERON:0002619!3.59e-27!22;UBERON:0000153!5.30e-27!129;UBERON:0007811!5.30e-27!129;UBERON:0004121!3.01e-26!169;UBERON:0000956!8.98e-26!25;UBERON:0000203!8.98e-26!25;UBERON:0000033!2.00e-25!123;UBERON:0000924!3.06e-25!173;UBERON:0006601!3.06e-25!173;UBERON:0001950!7.93e-24!20;UBERON:0002308!1.80e-17!9;UBERON:0000125!1.80e-17!9;UBERON:0003076!3.91e-17!15;UBERON:0003057!3.91e-17!15;UBERON:0002420!5.01e-17!9;UBERON:0007245!5.01e-17!9;UBERON:0010009!5.01e-17!9;UBERON:0010011!5.01e-17!9;UBERON:0000454!5.01e-17!9;UBERON:0004732!5.42e-14!13;UBERON:0009663!8.48e-14!7;UBERON:0000025!1.93e-13!194;UBERON:0002298!1.96e-12!8;UBERON:0004733!3.27e-12!12;UBERON:0002028!3.27e-12!12;UBERON:0007277!3.27e-12!12;UBERON:0000200!6.58e-12!6;UBERON:0000349!5.73e-10!5;UBERON:0004111!1.07e-08!241;UBERON:0001871!1.22e-08!7;UBERON:0000483!1.95e-08!309;UBERON:0000064!2.12e-08!219;UBERON:0000119!3.30e-08!312;UBERON:0000369!4.57e-08!4;UBERON:0002435!4.57e-08!4;UBERON:0000204!4.57e-08!4;UBERON:0010082!4.57e-08!4;UBERON:0000475!8.49e-08!365;UBERON:0002680!1.81e-07!9;UBERON:0001895!1.81e-07!9;UBERON:0010092!1.81e-07!9;UBERON:0006331!2.99e-07!3;UBERON:0000988!3.57e-07!3;UBERON:0000477!4.94e-07!286;UBERON:0002021!5.25e-07!5;UBERON:0001896!5.30e-07!3;UBERON:0005290!5.30e-07!3;UBERON:0010096!5.30e-07!3;UBERON:0002240!6.44e-07!3;UBERON:0002771!7.52e-07!3;UBERON:0001872!9.15e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.88e-57;34!UBERON:0003528;3.06e-55;34!UBERON:0002020;3.06e-55;34!UBERON:0002791;1.19e-53;32!UBERON:0001869;1.66e-53;32!UBERON:0000073;1.21e-48;53!UBERON:0002616;1.21e-48;53!UBERON:0002780;4.20e-48;41!UBERON:0001890;4.20e-48;41!UBERON:0002619;1.94e-46;22!UBERON:0001950;1.13e-40;20!UBERON:0000956;1.71e-40;25!UBERON:0000203;1.71e-40;25!UBERON:0001017;9.69e-33;75!UBERON:0000955;2.29e-31;68!UBERON:0000125;1.20e-28;9!UBERON:0002308;1.20e-28;9!UBERON:0002420;7.88e-28;9!UBERON:0007245;7.88e-28;9!UBERON:0010009;7.88e-28;9!UBERON:0010011;7.88e-28;9!UBERON:0000454;7.88e-28;9!UBERON:0001016;8.50e-26;83!UBERON:0004732;1.62e-23;13!UBERON:0009663;2.29e-22;7!UBERON:0004733;1.88e-20;12!UBERON:0002028;1.88e-20;12!UBERON:0002298;3.41e-20;6!UBERON:0000200;3.31e-19;6!UBERON:0000349;7.08e-16;5!UBERON:0007023;9.69e-16;114!UBERON:0000369;1.30e-12;4!UBERON:0002435;1.30e-12;4!UBERON:0000204;1.30e-12;4!UBERON:0002680;2.74e-12;9!UBERON:0001895;2.74e-12;9!UBERON:0001871;2.16e-11;6!UBERON:0002021;4.13e-11;5!UBERON:0000988;4.20e-11;3!UBERON:0001896;8.05e-11;3!UBERON:0005290;8.05e-11;3!UBERON:0002240;1.05e-10;3!UBERON:0005174;1.05e-10;3!UBERON:0001137;1.05e-10;3!UBERON:0001872;1.06e-10;5!UBERON:0011216;2.98e-10;132!UBERON:0001870;3.07e-10;3!UBERON:0005383;8.32e-10;3!UBERON:0005382;8.32e-10;3!UBERON:0005162;2.38e-08;2!UBERON:0000122;2.38e-08;2!UBERON:0001875;2.88e-08;2!UBERON:0006514;2.88e-08;2!UBERON:0001897;3.09e-08;2!UBERON:0010225;3.09e-08;2!UBERON:0002148;5.45e-08;2!UBERON:0006331;5.45e-08;2!UBERON:0009662;5.45e-08;2!UBERON:0010314;1.16e-07;132!UBERON:0002771;1.37e-07;2!UBERON:0001954;1.37e-07;2!UBERON:0003022;1.37e-07;2!UBERON:0002421;1.37e-07;2!UBERON:0002600;1.37e-07;2!UBERON:0002702;1.72e-07;2!UBERON:0001873;3.45e-07;2!UBERON:0001876;3.68e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.11e-97,56;UBERON:0005068,3.11e-97,56;UBERON:0006241,3.11e-97,56;UBERON:0007135,3.11e-97,56;UBERON:0000073,2.73e-88,53;UBERON:0002616,2.73e-88,53;UBERON:0001017,5.04e-77,81;UBERON:0000955,2.08e-73,68;UBERON:0006238,2.08e-73,68;UBERON:0001016,6.72e-72,89;UBERON:0002780,5.61e-68,41;UBERON:0001890,5.61e-68,41;UBERON:0003080,5.61e-68,41;UBERON:0006240,5.61e-68,41;UBERON:0003075,6.18e-67,82;UBERON:0007284,6.18e-67,82;UBERON:0003528,1.73e-66,34;UBERON:0002020,1.73e-66,34;UBERON:0001893,2.13e-66,34;UBERON:0002346,2.37e-63,86;UBERON:0002791,2.32e-60,32;UBERON:0001869,4.27e-60,32;UBERON:0007023,1.09e-50,114;UBERON:0010371,1.32e-50,104;UBERON:0003056,1.09e-46,61;UBERON:0002619,1.92e-46,22;UBERON:0001950,1.09e-40,20;UBERON:0000956,1.69e-40,25;UBERON:0000203,1.69e-40,25;UBERON:0010314,1.01e-39,132;UBERON:0004121,1.45e-32,171;UBERON:0000924,1.45e-32,171;UBERON:0006601,1.45e-32,171;UBERON:0003076,6.11e-29,15;UBERON:0003057,6.11e-29,15;UBERON:0000125,1.17e-28,9;UBERON:0002308,1.17e-28,9;UBERON:0002420,6.71e-28,9;UBERON:0007245,6.71e-28,9;UBERON:0010009,6.71e-28,9;UBERON:0010011,6.71e-28,9;UBERON:0000454,6.71e-28,9;UBERON:0011216,2.08e-27,223;UBERON:0000025,5.42e-25,192;UBERON:0004732,1.53e-23,13;UBERON:0009663,2.18e-22,7;UBERON:0004733,1.78e-20,12;UBERON:0002028,1.78e-20,12;UBERON:0007277,1.78e-20,12;UBERON:0002298,3.25e-20,6;UBERON:0000200,3.65e-19,6;UBERON:0004111,8.29e-18,240;UBERON:0000349,7.31e-16,5;UBERON:0000369,1.24e-12,4;UBERON:0002435,1.24e-12,4;UBERON:0000204,1.24e-12,4;UBERON:0010082,1.24e-12,4;UBERON:0000483,1.57e-12,306;UBERON:0002680,2.63e-12,9;UBERON:0001895,2.63e-12,9;UBERON:0010092,2.63e-12,9;UBERON:0000119,2.66e-12,309;UBERON:0001871,2.16e-11,6;UBERON:0002021,3.97e-11,5;UBERON:0000988,4.06e-11,3;UBERON:0001896,7.92e-11,3;UBERON:0005290,7.92e-11,3;UBERON:0010096,7.92e-11,3;UBERON:0001872,1.03e-10,5;UBERON:0002240,1.10e-10,3;UBERON:0005174,1.10e-10,3;UBERON:0001137,1.10e-10,3;UBERON:0001870,3.22e-10,3;UBERON:0005383,7.12e-10,3;UBERON:0005382,7.12e-10,3;UBERON:0005162,2.42e-08,2;UBERON:0000122,2.42e-08,2;UBERON:0001875,2.88e-08,2;UBERON:0006514,2.88e-08,2;UBERON:0001897,3.09e-08,2;UBERON:0010225,3.09e-08,2;UBERON:0002148,5.54e-08,2;UBERON:0006331,5.54e-08,2;UBERON:0009662,5.54e-08,2;UBERON:0001954,1.41e-07,2;UBERON:0003022,1.41e-07,2;UBERON:0002421,1.41e-07,2;UBERON:0002600,1.41e-07,2;UBERON:0002771,1.51e-07,2;UBERON:0002702,1.78e-07,2;UBERON:0001876,3.29e-07,2;UBERON:0001873,3.29e-07,2;UBERON:0010122,3.29e-07,2;UBERON:0000923,4.07e-07,560;UBERON:0010316,4.07e-07,560;UBERON:0005291,4.07e-07,560;UBERON:0006598,4.07e-07,560;UBERON:0010317,4.07e-07,560;UBERON:0002532,4.07e-07,560;UBERON:0002050,5.63e-07,564 | |||
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|short_description=p2@TMEM88B | |||
}} | }} |
Latest revision as of 15:27, 16 September 2015
Short description: | p2@TMEM88B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM88B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -32bp_to_NM_001146685, uc010nyp.1_5end |
EntrezGene: | TMEM88B |
HGNC: | 37099 |
UniProt: | A6NKF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data