FFCP PHASE1:Hg19::chr4:57547870..57547873,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84525 | |EntrezGene=84525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24961 | |HGNC=24961 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BPY8,B7WNL2,G3V294,G3V469,E9PB55 | |UniProt=Q9BPY8,B7WNL2,G3V294,G3V469,E9PB55 | ||
|association_with_transcript=0bp_to_ENST00000420433,ENST00000509435,ENST00000554144,ENST00000557328,NM_001145460,NM_032495,NM_139212,uc003hca.2,uc003hcb.2,uc003hcc.2,uc003hcd.2,uc003hce.2_5end | |association_with_transcript=0bp_to_ENST00000420433,ENST00000509435,ENST00000554144,ENST00000557328,NM_001145460,NM_032495,NM_139212,uc003hca.2,uc003hcb.2,uc003hcc.2,uc003hcd.2,uc003hce.2_5end | ||
|cluster_id=chr4:57547870..57547873,- | |||
|coexpression_cluster_id=C1942 | |coexpression_cluster_id=C1942 | ||
|description=CAGE_peak_11_at_HOPX_5end | |description=CAGE_peak_11_at_HOPX_5end | ||
|id=chr4:57547870..57547873,- | |id=chr4:57547870..57547873,- | ||
|ontology_enrichment_celltype=CL:0002605!2.58e-09!3 | |ontology_enrichment_celltype=CL:0002605!2.58e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002605;5.09e-15;3!CL:0000047;3.93e-11;2!CL:0002319;6.50e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.02e-15,3;CL:0000047,4.22e-10,8;CL:0002319,6.73e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.67e-14;3!UBERON:0003057;1.67e-14;3!UBERON:0006601;3.96e-14;82!UBERON:0006215;6.59e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.59e-99!57;UBERON:0005068!5.59e-99!57;UBERON:0006241!5.59e-99!57;UBERON:0007135!5.59e-99!57;UBERON:0001017!7.95e-88!82;UBERON:0005743!3.74e-83!86;UBERON:0002616!1.67e-82!59;UBERON:0000955!1.28e-74!69;UBERON:0006238!1.28e-74!69;UBERON:0000073!4.73e-74!94;UBERON:0001016!4.73e-74!94;UBERON:0002780!1.80e-73!41;UBERON:0001890!1.80e-73!41;UBERON:0006240!1.80e-73!41;UBERON:0003080!1.63e-71!42;UBERON:0001893!8.23e-71!34;UBERON:0002020!1.69e-70!34;UBERON:0003528!1.69e-70!34;UBERON:0002791!3.47e-68!33;UBERON:0001869!2.33e-66!32;UBERON:0003075!2.03e-64!86;UBERON:0007284!2.03e-64!86;UBERON:0002346!5.56e-61!90;UBERON:0007023!4.98e-56!115;UBERON:0000956!2.02e-50!25;UBERON:0000203!2.02e-50!25;UBERON:0003056!2.43e-46!61;UBERON:0000033!4.56e-44!123;UBERON:0000153!2.82e-43!129;UBERON:0007811!2.82e-43!129;UBERON:0002619!8.19e-43!22;UBERON:0004121!5.97e-40!169;UBERON:0000924!1.07e-38!173;UBERON:0006601!1.07e-38!173;UBERON:0001950!5.50e-38!20;UBERON:0003076!4.96e-27!15;UBERON:0003057!4.96e-27!15;UBERON:0000025!1.01e-25!194;UBERON:0004111!5.24e-23!241;UBERON:0002420!8.73e-22!9;UBERON:0007245!8.73e-22!9;UBERON:0010009!8.73e-22!9;UBERON:0010011!8.73e-22!9;UBERON:0000454!8.73e-22!9;UBERON:0002308!4.34e-21!9;UBERON:0000125!4.34e-21!9;UBERON:0000477!5.86e-20!286;UBERON:0004733!8.33e-20!12;UBERON:0002028!8.33e-20!12;UBERON:0007277!8.33e-20!12;UBERON:0004732!4.12e-18!13;UBERON:0009663!1.11e-16!7;UBERON:0000200!2.10e-16!6;UBERON:0001871!4.70e-16!7;UBERON:0002298!3.68e-15!8;UBERON:0000483!5.98e-15!309;UBERON:0000119!1.14e-14!312;UBERON:0000349!6.57e-14!5;UBERON:0002680!5.63e-13!9;UBERON:0001895!5.63e-13!9;UBERON:0010092!5.63e-13!9;UBERON:0000475!2.20e-12!365;UBERON:0000064!1.05e-11!219;UBERON:0000369!1.38e-10!4;UBERON:0002435!1.38e-10!4;UBERON:0000204!1.38e-10!4;UBERON:0010082!1.38e-10!4;UBERON:0002240!3.48e-09!3;UBERON:0001872!4.34e-09!5;UBERON:0001896!6.28e-09!3;UBERON:0005290!6.28e-09!3;UBERON:0010096!6.28e-09!3;UBERON:0002771!6.45e-09!3;UBERON:0002021!6.57e-09!5;UBERON:0000062!9.16e-09!511;UBERON:0005383!2.37e-08!3;UBERON:0005382!2.37e-08!3;UBERON:0000988!3.39e-08!3;UBERON:0006331!3.65e-08!3;UBERON:0000922!6.90e-08!612;UBERON:0000481!1.03e-07!347;UBERON:0000923!4.16e-07!604;UBERON:0005291!4.16e-07!604;UBERON:0006598!4.16e-07!604;UBERON:0002532!4.16e-07!604;UBERON:0002050!4.56e-07!605;UBERON:0005423!4.56e-07!605;UBERON:0002037!5.48e-07!6;UBERON:0006215!5.48e-07!6;UBERON:0000467!8.10e-07!625;UBERON:0001876!8.10e-07!2;UBERON:0000480!8.85e-07!626 | |ontology_enrichment_uberon=UBERON:0001049!5.59e-99!57;UBERON:0005068!5.59e-99!57;UBERON:0006241!5.59e-99!57;UBERON:0007135!5.59e-99!57;UBERON:0001017!7.95e-88!82;UBERON:0005743!3.74e-83!86;UBERON:0002616!1.67e-82!59;UBERON:0000955!1.28e-74!69;UBERON:0006238!1.28e-74!69;UBERON:0000073!4.73e-74!94;UBERON:0001016!4.73e-74!94;UBERON:0002780!1.80e-73!41;UBERON:0001890!1.80e-73!41;UBERON:0006240!1.80e-73!41;UBERON:0003080!1.63e-71!42;UBERON:0001893!8.23e-71!34;UBERON:0002020!1.69e-70!34;UBERON:0003528!1.69e-70!34;UBERON:0002791!3.47e-68!33;UBERON:0001869!2.33e-66!32;UBERON:0003075!2.03e-64!86;UBERON:0007284!2.03e-64!86;UBERON:0002346!5.56e-61!90;UBERON:0007023!4.98e-56!115;UBERON:0000956!2.02e-50!25;UBERON:0000203!2.02e-50!25;UBERON:0003056!2.43e-46!61;UBERON:0000033!4.56e-44!123;UBERON:0000153!2.82e-43!129;UBERON:0007811!2.82e-43!129;UBERON:0002619!8.19e-43!22;UBERON:0004121!5.97e-40!169;UBERON:0000924!1.07e-38!173;UBERON:0006601!1.07e-38!173;UBERON:0001950!5.50e-38!20;UBERON:0003076!4.96e-27!15;UBERON:0003057!4.96e-27!15;UBERON:0000025!1.01e-25!194;UBERON:0004111!5.24e-23!241;UBERON:0002420!8.73e-22!9;UBERON:0007245!8.73e-22!9;UBERON:0010009!8.73e-22!9;UBERON:0010011!8.73e-22!9;UBERON:0000454!8.73e-22!9;UBERON:0002308!4.34e-21!9;UBERON:0000125!4.34e-21!9;UBERON:0000477!5.86e-20!286;UBERON:0004733!8.33e-20!12;UBERON:0002028!8.33e-20!12;UBERON:0007277!8.33e-20!12;UBERON:0004732!4.12e-18!13;UBERON:0009663!1.11e-16!7;UBERON:0000200!2.10e-16!6;UBERON:0001871!4.70e-16!7;UBERON:0002298!3.68e-15!8;UBERON:0000483!5.98e-15!309;UBERON:0000119!1.14e-14!312;UBERON:0000349!6.57e-14!5;UBERON:0002680!5.63e-13!9;UBERON:0001895!5.63e-13!9;UBERON:0010092!5.63e-13!9;UBERON:0000475!2.20e-12!365;UBERON:0000064!1.05e-11!219;UBERON:0000369!1.38e-10!4;UBERON:0002435!1.38e-10!4;UBERON:0000204!1.38e-10!4;UBERON:0010082!1.38e-10!4;UBERON:0002240!3.48e-09!3;UBERON:0001872!4.34e-09!5;UBERON:0001896!6.28e-09!3;UBERON:0005290!6.28e-09!3;UBERON:0010096!6.28e-09!3;UBERON:0002771!6.45e-09!3;UBERON:0002021!6.57e-09!5;UBERON:0000062!9.16e-09!511;UBERON:0005383!2.37e-08!3;UBERON:0005382!2.37e-08!3;UBERON:0000988!3.39e-08!3;UBERON:0006331!3.65e-08!3;UBERON:0000922!6.90e-08!612;UBERON:0000481!1.03e-07!347;UBERON:0000923!4.16e-07!604;UBERON:0005291!4.16e-07!604;UBERON:0006598!4.16e-07!604;UBERON:0002532!4.16e-07!604;UBERON:0002050!4.56e-07!605;UBERON:0005423!4.56e-07!605;UBERON:0002037!5.48e-07!6;UBERON:0006215!5.48e-07!6;UBERON:0000467!8.10e-07!625;UBERON:0001876!8.10e-07!2;UBERON:0000480!8.85e-07!626 | ||
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| ||
|short_description=p11@HOPX | |short_description=p11@HOPX | ||
}} | }} |
Latest revision as of 03:04, 18 September 2015
Short description: | p11@HOPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_HOPX_5end |
Coexpression cluster: | C1942_Neural_spinal_Astrocyte_Neurons_caudate_locus_medial |
Association with transcript: | 0bp_to_ENST00000420433, ENST00000509435, ENST00000554144, ENST00000557328, NM_001145460, NM_032495, NM_139212, uc003hca.2, uc003hcb.2, uc003hcc.2, uc003hcd.2, uc003hce.2_5end |
EntrezGene: | HOPX |
HGNC: | 24961 |
UniProt: | Q9BPY8B7WNL2G3V294G3V469E9PB55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.02e-15 | 3 |
neuronal stem cell | 4.22e-10 | 8 |
neural cell | 6.73e-08 | 25 |