FFCP PHASE1:Hg19::chr9:91793987..91794052,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:91793987..91794052,-
|short_description=p3@SHC3
|description=CAGE_peak_3_at_SHC3_5end
|association_with_transcript=-305bp_to_ENST00000375830,ENST0000037583...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=53358 | |EntrezGene=53358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18181 | |HGNC=18181 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T7I8,Q92529 | |UniProt=Q5T7I8,Q92529 | ||
|association_with_transcript=-305bp_to_ENST00000375830,ENST00000375835,NM_016848,uc004aqg.2_5end | |||
|cluster_id=chr9:91793987..91794052,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SHC3_5end | |||
|id=chr9:91793987..91794052,- | |||
|ontology_enrichment_celltype=CL:0000047!1.93e-11!8;CL:0000540!1.39e-08!6;CL:0000031!1.39e-08!6;CL:0000404!1.39e-08!6;CL:0002319!7.60e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.19e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.87e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.38e-16;82!UBERON:0010122;3.31e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@SHC3 | |||
}} | }} |
Latest revision as of 04:33, 18 September 2015
Short description: | p3@SHC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SHC3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -305bp_to_ENST00000375830, ENST00000375835, NM_016848, uc004aqg.2_5end |
EntrezGene: | SHC3 |
HGNC: | 18181 |
UniProt: | Q5T7I8Q92529 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.87e-10 | 8 |