FFCP PHASE1:Hg19::chr2:17722000..17722011,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7447 | |EntrezGene=7447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12722 | |HGNC=12722 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000483921_5end | |association_with_transcript=26bp_to_ENST00000483921_5end | ||
|cluster_id=chr2:17722000..17722011,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_VSNL1_5end | |description=CAGE_peak_2_at_VSNL1_5end | ||
|id=chr2:17722000..17722011,+ | |id=chr2:17722000..17722011,+ | ||
|ontology_enrichment_celltype=CL:0000047!5.00e-08!8;CL:0002251!3.32e-07!21 | |ontology_enrichment_celltype=CL:0000047!5.00e-08!8;CL:0002251!3.32e-07!21 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.65e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.75e-17;82!UBERON:0006215;1.41e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!5.17e-07!14 | |ontology_enrichment_disease=DOID:1749!5.17e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.77e-59!82;UBERON:0005743!2.09e-57!86;UBERON:0001049!3.93e-54!57;UBERON:0005068!3.93e-54!57;UBERON:0006241!3.93e-54!57;UBERON:0007135!3.93e-54!57;UBERON:0000073!2.54e-53!94;UBERON:0001016!2.54e-53!94;UBERON:0002616!1.33e-46!59;UBERON:0000955!2.50e-46!69;UBERON:0006238!2.50e-46!69;UBERON:0004121!2.93e-45!169;UBERON:0000033!2.83e-44!123;UBERON:0000924!1.46e-43!173;UBERON:0006601!1.46e-43!173;UBERON:0000153!2.37e-42!129;UBERON:0007811!2.37e-42!129;UBERON:0001893!5.18e-41!34;UBERON:0002020!5.92e-41!34;UBERON:0003528!5.92e-41!34;UBERON:0003075!4.09e-40!86;UBERON:0007284!4.09e-40!86;UBERON:0002791!1.56e-39!33;UBERON:0002780!3.88e-39!41;UBERON:0001890!3.88e-39!41;UBERON:0006240!3.88e-39!41;UBERON:0001869!6.29e-39!32;UBERON:0003080!6.59e-38!42;UBERON:0002346!1.83e-37!90;UBERON:0007023!9.72e-32!115;UBERON:0000956!5.01e-30!25;UBERON:0000203!5.01e-30!25;UBERON:0002619!6.03e-30!22;UBERON:0001950!2.87e-27!20;UBERON:0003056!3.63e-26!61;UBERON:0003076!6.83e-17!15;UBERON:0003057!6.83e-17!15;UBERON:0004733!1.77e-13!12;UBERON:0002028!1.77e-13!12;UBERON:0007277!1.77e-13!12;UBERON:0004111!7.03e-13!241;UBERON:0002420!2.13e-12!9;UBERON:0007245!2.13e-12!9;UBERON:0010009!2.13e-12!9;UBERON:0010011!2.13e-12!9;UBERON:0000454!2.13e-12!9;UBERON:0002308!3.12e-12!9;UBERON:0000125!3.12e-12!9;UBERON:0004732!3.43e-12!13;UBERON:0000475!6.13e-12!365;UBERON:0000064!2.26e-11!219;UBERON:0000025!7.92e-11!194;UBERON:0000922!8.13e-11!612;UBERON:0000200!2.83e-10!6;UBERON:0000468!2.96e-10!659;UBERON:0000062!3.43e-10!511;UBERON:0002680!9.48e-10!9;UBERON:0001895!9.48e-10!9;UBERON:0010092!9.48e-10!9;UBERON:0009663!1.11e-09!7;UBERON:0000477!1.58e-09!286;UBERON:0001871!1.87e-09!7;UBERON:0000467!2.12e-09!625;UBERON:0000480!2.51e-09!626;UBERON:0002298!9.70e-09!8;UBERON:0001872!1.23e-08!5;UBERON:0000923!1.33e-08!604;UBERON:0005291!1.33e-08!604;UBERON:0006598!1.33e-08!604;UBERON:0002532!1.33e-08!604;UBERON:0002050!1.57e-08!605;UBERON:0005423!1.57e-08!605;UBERON:0000349!2.23e-08!5;UBERON:0002021!3.31e-08!5;UBERON:0000483!5.91e-08!309;UBERON:0000119!1.07e-07!312;UBERON:0000166!4.15e-07!21;UBERON:0000481!5.58e-07!347;UBERON:0000369!9.16e-07!4;UBERON:0002435!9.16e-07!4;UBERON:0000204!9.16e-07!4;UBERON:0010082!9.16e-07!4 | |ontology_enrichment_uberon=UBERON:0001017!2.77e-59!82;UBERON:0005743!2.09e-57!86;UBERON:0001049!3.93e-54!57;UBERON:0005068!3.93e-54!57;UBERON:0006241!3.93e-54!57;UBERON:0007135!3.93e-54!57;UBERON:0000073!2.54e-53!94;UBERON:0001016!2.54e-53!94;UBERON:0002616!1.33e-46!59;UBERON:0000955!2.50e-46!69;UBERON:0006238!2.50e-46!69;UBERON:0004121!2.93e-45!169;UBERON:0000033!2.83e-44!123;UBERON:0000924!1.46e-43!173;UBERON:0006601!1.46e-43!173;UBERON:0000153!2.37e-42!129;UBERON:0007811!2.37e-42!129;UBERON:0001893!5.18e-41!34;UBERON:0002020!5.92e-41!34;UBERON:0003528!5.92e-41!34;UBERON:0003075!4.09e-40!86;UBERON:0007284!4.09e-40!86;UBERON:0002791!1.56e-39!33;UBERON:0002780!3.88e-39!41;UBERON:0001890!3.88e-39!41;UBERON:0006240!3.88e-39!41;UBERON:0001869!6.29e-39!32;UBERON:0003080!6.59e-38!42;UBERON:0002346!1.83e-37!90;UBERON:0007023!9.72e-32!115;UBERON:0000956!5.01e-30!25;UBERON:0000203!5.01e-30!25;UBERON:0002619!6.03e-30!22;UBERON:0001950!2.87e-27!20;UBERON:0003056!3.63e-26!61;UBERON:0003076!6.83e-17!15;UBERON:0003057!6.83e-17!15;UBERON:0004733!1.77e-13!12;UBERON:0002028!1.77e-13!12;UBERON:0007277!1.77e-13!12;UBERON:0004111!7.03e-13!241;UBERON:0002420!2.13e-12!9;UBERON:0007245!2.13e-12!9;UBERON:0010009!2.13e-12!9;UBERON:0010011!2.13e-12!9;UBERON:0000454!2.13e-12!9;UBERON:0002308!3.12e-12!9;UBERON:0000125!3.12e-12!9;UBERON:0004732!3.43e-12!13;UBERON:0000475!6.13e-12!365;UBERON:0000064!2.26e-11!219;UBERON:0000025!7.92e-11!194;UBERON:0000922!8.13e-11!612;UBERON:0000200!2.83e-10!6;UBERON:0000468!2.96e-10!659;UBERON:0000062!3.43e-10!511;UBERON:0002680!9.48e-10!9;UBERON:0001895!9.48e-10!9;UBERON:0010092!9.48e-10!9;UBERON:0009663!1.11e-09!7;UBERON:0000477!1.58e-09!286;UBERON:0001871!1.87e-09!7;UBERON:0000467!2.12e-09!625;UBERON:0000480!2.51e-09!626;UBERON:0002298!9.70e-09!8;UBERON:0001872!1.23e-08!5;UBERON:0000923!1.33e-08!604;UBERON:0005291!1.33e-08!604;UBERON:0006598!1.33e-08!604;UBERON:0002532!1.33e-08!604;UBERON:0002050!1.57e-08!605;UBERON:0005423!1.57e-08!605;UBERON:0000349!2.23e-08!5;UBERON:0002021!3.31e-08!5;UBERON:0000483!5.91e-08!309;UBERON:0000119!1.07e-07!312;UBERON:0000166!4.15e-07!21;UBERON:0000481!5.58e-07!347;UBERON:0000369!9.16e-07!4;UBERON:0002435!9.16e-07!4;UBERON:0000204!9.16e-07!4;UBERON:0010082!9.16e-07!4 | ||
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| ||
|short_description=p2@VSNL1 | |short_description=p2@VSNL1 | ||
}} | }} |
Latest revision as of 09:47, 18 September 2015
Short description: | p2@VSNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VSNL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 26bp_to_ENST00000483921_5end |
EntrezGene: | VSNL1 |
HGNC: | 12722 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.65e-10 | 8 |