FFCP PHASE1:Hg19::chr2:77749423..77749444,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80059 | |EntrezGene=80059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19411 | |HGNC=19411 | ||
|TSSclassifier=strong | |||
|UniProt=B8ZZ84 | |UniProt=B8ZZ84 | ||
|association_with_transcript=20bp_to_ENST00000409911_5end | |association_with_transcript=20bp_to_ENST00000409911_5end | ||
|cluster_id=chr2:77749423..77749444,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_4_at_LRRTM4_5end | |description=CAGE_peak_4_at_LRRTM4_5end | ||
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|ontology_enrichment_celltype=CL:0000047!2.37e-09!8;CL:0000540!2.55e-09!6;CL:0000031!2.55e-09!6;CL:0000404!2.55e-09!6 | |ontology_enrichment_celltype=CL:0000047!2.37e-09!8;CL:0000540!2.55e-09!6;CL:0000031!2.55e-09!6;CL:0000404!2.55e-09!6 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.07e-22;82!UBERON:0006241;1.70e-09;3!UBERON:0003057;1.70e-09;3!UBERON:0010122;1.51e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;4.07e-22;82!UBERON:0006241;1.70e-09;3!UBERON:0003057;1.70e-09;3!UBERON:0010122;1.51e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.31e-66!82;UBERON:0001049!1.60e-65!57;UBERON:0005068!1.60e-65!57;UBERON:0006241!1.60e-65!57;UBERON:0007135!1.60e-65!57;UBERON:0005743!5.31e-65!86;UBERON:0000073!4.52e-57!94;UBERON:0001016!4.52e-57!94;UBERON:0002780!2.03e-56!41;UBERON:0001890!2.03e-56!41;UBERON:0006240!2.03e-56!41;UBERON:0003080!8.66e-55!42;UBERON:0002616!1.83e-54!59;UBERON:0007023!1.06e-52!115;UBERON:0000955!6.77e-51!69;UBERON:0006238!6.77e-51!69;UBERON:0001893!5.60e-49!34;UBERON:0002020!6.70e-49!34;UBERON:0003528!6.70e-49!34;UBERON:0003075!9.37e-48!86;UBERON:0007284!9.37e-48!86;UBERON:0002791!3.01e-47!33;UBERON:0002346!6.39e-47!90;UBERON:0001869!2.60e-46!32;UBERON:0002619!3.20e-37!22;UBERON:0003056!6.50e-36!61;UBERON:0000956!6.85e-35!25;UBERON:0000203!6.85e-35!25;UBERON:0001950!5.24e-34!20;UBERON:0000924!2.66e-29!173;UBERON:0006601!2.66e-29!173;UBERON:0004121!3.34e-29!169;UBERON:0000033!1.30e-25!123;UBERON:0000153!6.65e-25!129;UBERON:0007811!6.65e-25!129;UBERON:0002420!9.59e-16!9;UBERON:0007245!9.59e-16!9;UBERON:0010009!9.59e-16!9;UBERON:0010011!9.59e-16!9;UBERON:0000454!9.59e-16!9;UBERON:0002308!2.79e-15!9;UBERON:0000125!2.79e-15!9;UBERON:0000025!3.02e-13!194;UBERON:0009663!2.43e-12!7;UBERON:0000200!4.24e-12!6;UBERON:0003076!4.99e-12!15;UBERON:0003057!4.99e-12!15;UBERON:0001871!7.29e-12!7;UBERON:0004111!1.23e-11!241;UBERON:0001872!4.01e-10!5;UBERON:0002021!5.26e-10!5;UBERON:0000349!5.55e-10!5;UBERON:0002298!6.30e-10!8;UBERON:0001894!9.39e-09!7;UBERON:0006222!9.39e-09!7;UBERON:0000369!2.14e-08!4;UBERON:0002435!2.14e-08!4;UBERON:0000204!2.14e-08!4;UBERON:0010082!2.14e-08!4;UBERON:0000922!2.32e-08!612;UBERON:0000477!2.42e-08!286;UBERON:0004733!3.80e-08!12;UBERON:0002028!3.80e-08!12;UBERON:0007277!3.80e-08!12;UBERON:0000483!1.64e-07!309;UBERON:0004732!2.15e-07!13;UBERON:0000119!2.72e-07!312;UBERON:0000064!4.44e-07!219;UBERON:0000062!4.69e-07!511;UBERON:0002771!5.88e-07!3 | |ontology_enrichment_uberon=UBERON:0001017!1.31e-66!82;UBERON:0001049!1.60e-65!57;UBERON:0005068!1.60e-65!57;UBERON:0006241!1.60e-65!57;UBERON:0007135!1.60e-65!57;UBERON:0005743!5.31e-65!86;UBERON:0000073!4.52e-57!94;UBERON:0001016!4.52e-57!94;UBERON:0002780!2.03e-56!41;UBERON:0001890!2.03e-56!41;UBERON:0006240!2.03e-56!41;UBERON:0003080!8.66e-55!42;UBERON:0002616!1.83e-54!59;UBERON:0007023!1.06e-52!115;UBERON:0000955!6.77e-51!69;UBERON:0006238!6.77e-51!69;UBERON:0001893!5.60e-49!34;UBERON:0002020!6.70e-49!34;UBERON:0003528!6.70e-49!34;UBERON:0003075!9.37e-48!86;UBERON:0007284!9.37e-48!86;UBERON:0002791!3.01e-47!33;UBERON:0002346!6.39e-47!90;UBERON:0001869!2.60e-46!32;UBERON:0002619!3.20e-37!22;UBERON:0003056!6.50e-36!61;UBERON:0000956!6.85e-35!25;UBERON:0000203!6.85e-35!25;UBERON:0001950!5.24e-34!20;UBERON:0000924!2.66e-29!173;UBERON:0006601!2.66e-29!173;UBERON:0004121!3.34e-29!169;UBERON:0000033!1.30e-25!123;UBERON:0000153!6.65e-25!129;UBERON:0007811!6.65e-25!129;UBERON:0002420!9.59e-16!9;UBERON:0007245!9.59e-16!9;UBERON:0010009!9.59e-16!9;UBERON:0010011!9.59e-16!9;UBERON:0000454!9.59e-16!9;UBERON:0002308!2.79e-15!9;UBERON:0000125!2.79e-15!9;UBERON:0000025!3.02e-13!194;UBERON:0009663!2.43e-12!7;UBERON:0000200!4.24e-12!6;UBERON:0003076!4.99e-12!15;UBERON:0003057!4.99e-12!15;UBERON:0001871!7.29e-12!7;UBERON:0004111!1.23e-11!241;UBERON:0001872!4.01e-10!5;UBERON:0002021!5.26e-10!5;UBERON:0000349!5.55e-10!5;UBERON:0002298!6.30e-10!8;UBERON:0001894!9.39e-09!7;UBERON:0006222!9.39e-09!7;UBERON:0000369!2.14e-08!4;UBERON:0002435!2.14e-08!4;UBERON:0000204!2.14e-08!4;UBERON:0010082!2.14e-08!4;UBERON:0000922!2.32e-08!612;UBERON:0000477!2.42e-08!286;UBERON:0004733!3.80e-08!12;UBERON:0002028!3.80e-08!12;UBERON:0007277!3.80e-08!12;UBERON:0000483!1.64e-07!309;UBERON:0004732!2.15e-07!13;UBERON:0000119!2.72e-07!312;UBERON:0000064!4.44e-07!219;UBERON:0000062!4.69e-07!511;UBERON:0002771!5.88e-07!3 | ||
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|short_description=p4@LRRTM4 | |short_description=p4@LRRTM4 | ||
}} | }} |
Latest revision as of 13:20, 18 September 2015
Short description: | p4@LRRTM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRTM4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 20bp_to_ENST00000409911_5end |
EntrezGene: | LRRTM4 |
HGNC: | 19411 |
UniProt: | B8ZZ84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data