FFCP PHASE1:Hg19::chr4:79892726..79892755,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:79892726..79892755,+ to FFCP PHASE1:Hg19::chr4:79892726..79892755,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100505875 | |EntrezGene=100505875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-146bp_to_ENST00000509088,ENST00000510667,NR_038342,uc003hlr.1_5end | |||
|cluster_id=chr4:79892726..79892755,+ | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_1_at_LOC100505875_5end | |||
|id=chr4:79892726..79892755,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.04e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.42e-08;13!CL:0002615;1.02e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,7.33e-08,3;CL:0000136,8.68e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.53e-13;82!UBERON:0006241;1.27e-08;3!UBERON:0003057;1.27e-08;3!UBERON:0006215;1.61e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-93!115;UBERON:0001049!1.71e-50!57;UBERON:0005068!1.71e-50!57;UBERON:0006241!1.71e-50!57;UBERON:0007135!1.71e-50!57;UBERON:0002616!2.01e-49!59;UBERON:0002346!6.93e-44!90;UBERON:0001017!1.02e-43!82;UBERON:0000955!3.12e-43!69;UBERON:0006238!3.12e-43!69;UBERON:0005743!7.19e-43!86;UBERON:0003075!9.31e-42!86;UBERON:0007284!9.31e-42!86;UBERON:0000073!6.51e-39!94;UBERON:0001016!6.51e-39!94;UBERON:0003080!5.90e-36!42;UBERON:0002780!1.00e-34!41;UBERON:0001890!1.00e-34!41;UBERON:0006240!1.00e-34!41;UBERON:0002020!4.55e-25!34;UBERON:0003528!4.55e-25!34;UBERON:0001893!8.80e-25!34;UBERON:0003056!2.11e-24!61;UBERON:0000153!5.47e-24!129;UBERON:0007811!5.47e-24!129;UBERON:0002791!1.25e-23!33;UBERON:0000033!1.02e-22!123;UBERON:0001869!6.55e-22!32;UBERON:0000924!1.29e-21!173;UBERON:0006601!1.29e-21!173;UBERON:0004121!5.29e-20!169;UBERON:0002619!1.54e-16!22;UBERON:0003076!3.04e-15!15;UBERON:0003057!3.04e-15!15;UBERON:0002298!3.41e-14!8;UBERON:0000956!4.95e-14!25;UBERON:0000203!4.95e-14!25;UBERON:0002308!5.26e-14!9;UBERON:0000125!5.26e-14!9;UBERON:0001950!7.36e-14!20;UBERON:0000025!3.43e-13!194;UBERON:0001894!2.59e-12!7;UBERON:0006222!2.59e-12!7;UBERON:0004732!3.89e-12!13;UBERON:0004111!1.32e-11!241;UBERON:0000477!5.30e-11!286;UBERON:0004733!7.68e-11!12;UBERON:0002028!7.68e-11!12;UBERON:0007277!7.68e-11!12;UBERON:0009663!8.65e-11!7;UBERON:0002420!1.59e-10!9;UBERON:0007245!1.59e-10!9;UBERON:0010009!1.59e-10!9;UBERON:0010011!1.59e-10!9;UBERON:0000454!1.59e-10!9;UBERON:0000475!1.04e-09!365;UBERON:0000062!1.96e-09!511;UBERON:0003296!1.34e-07!4;UBERON:0010133!1.34e-07!4;UBERON:0000064!1.60e-07!219;UBERON:0000483!2.39e-07!309;UBERON:0000468!2.46e-07!659;UBERON:0000481!3.50e-07!347;UBERON:0000119!4.04e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;9.82e-28;53!UBERON:0002616;9.82e-28;53!UBERON:0007023;9.01e-25;114!UBERON:0002780;1.54e-24;41!UBERON:0001890;1.54e-24;41!UBERON:0001017;1.17e-18;75!UBERON:0001016;5.28e-18;83!UBERON:0004732;8.84e-18;13!UBERON:0001894;2.86e-17;7!UBERON:0000955;7.70e-17;68!UBERON:0002298;4.48e-16;6!UBERON:0004733;7.00e-16;12!UBERON:0002028;7.00e-16;12!UBERON:0001893;1.08e-15;34!UBERON:0003528;1.07e-14;34!UBERON:0002020;1.07e-14;34!UBERON:0002791;5.42e-14;32!UBERON:0001869;9.85e-14;32!UBERON:0000125;3.38e-13;9!UBERON:0002308;3.38e-13;9!UBERON:0002619;3.37e-11;22!UBERON:0002784;5.12e-11;4!UBERON:0003296;2.31e-10;4!UBERON:0010133;2.31e-10;4!UBERON:0000956;1.33e-09;25!UBERON:0000203;1.33e-09;25!UBERON:0002680;2.17e-09;9!UBERON:0001895;2.17e-09;9!UBERON:0002420;3.00e-09;9!UBERON:0007245;3.00e-09;9!UBERON:0010009;3.00e-09;9!UBERON:0010011;3.00e-09;9!UBERON:0000454;3.00e-09;9!UBERON:0001896;4.39e-09;3!UBERON:0005290;4.39e-09;3!UBERON:0009663;8.03e-09;7!UBERON:0000988;1.09e-08;3!UBERON:0002240;1.27e-08;3!UBERON:0005174;1.27e-08;3!UBERON:0001137;1.27e-08;3!UBERON:0001950;2.89e-08;20!UBERON:0006947;3.40e-08;3!UBERON:0004054;3.40e-08;3!UBERON:0003978;9.47e-08;3!UBERON:0000946;9.47e-08;3!UBERON:0011216;7.13e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.62e-85,114;UBERON:0001049,9.41e-52,56;UBERON:0005068,9.41e-52,56;UBERON:0006241,9.41e-52,56;UBERON:0007135,9.41e-52,56;UBERON:0000073,1.50e-45,53;UBERON:0002616,1.50e-45,53;UBERON:0001017,1.26e-44,81;UBERON:0003075,9.68e-43,82;UBERON:0007284,9.68e-43,82;UBERON:0000955,1.42e-41,68;UBERON:0006238,1.42e-41,68;UBERON:0001016,3.98e-41,89;UBERON:0002346,3.39e-40,86;UBERON:0002780,3.52e-31,41;UBERON:0001890,3.52e-31,41;UBERON:0003080,3.52e-31,41;UBERON:0006240,3.52e-31,41;UBERON:0010371,3.61e-31,104;UBERON:0010314,1.76e-27,132;UBERON:0003076,2.09e-22,15;UBERON:0003057,2.09e-22,15;UBERON:0003056,2.54e-22,61;UBERON:0004121,3.79e-20,171;UBERON:0000924,3.79e-20,171;UBERON:0006601,3.79e-20,171;UBERON:0003528,4.12e-19,34;UBERON:0002020,4.12e-19,34;UBERON:0001893,8.25e-19,34;UBERON:0004732,8.91e-18,13;UBERON:0001894,1.93e-17,7;UBERON:0006222,1.93e-17,7;UBERON:0002298,4.99e-16,6;UBERON:0004733,7.57e-16,12;UBERON:0002028,7.57e-16,12;UBERON:0007277,7.57e-16,12;UBERON:0011216,7.78e-16,223;UBERON:0002791,9.38e-16,32;UBERON:0001869,1.84e-15,32;UBERON:0000025,5.12e-14,192;UBERON:0000125,3.43e-13,9;UBERON:0002308,3.43e-13,9;UBERON:0004111,1.14e-12,240;UBERON:0002619,3.30e-11,22;UBERON:0002784,5.08e-11,4;UBERON:0003296,1.73e-10,4;UBERON:0010133,1.73e-10,4;UBERON:0000956,1.31e-09,25;UBERON:0000203,1.31e-09,25;UBERON:0002680,2.31e-09,9;UBERON:0001895,2.31e-09,9;UBERON:0010092,2.31e-09,9;UBERON:0002420,2.45e-09,9;UBERON:0007245,2.45e-09,9;UBERON:0010009,2.45e-09,9;UBERON:0010011,2.45e-09,9;UBERON:0000454,2.45e-09,9;UBERON:0001896,4.40e-09,3;UBERON:0005290,4.40e-09,3;UBERON:0010096,4.40e-09,3;UBERON:0009663,7.99e-09,7;UBERON:0002240,1.10e-08,3;UBERON:0005174,1.10e-08,3;UBERON:0001137,1.10e-08,3;UBERON:0000988,1.21e-08,3;UBERON:0001950,2.96e-08,20;UBERON:0000483,3.45e-08,306;UBERON:0006947,3.49e-08,3;UBERON:0004054,3.49e-08,3;UBERON:0000119,5.44e-08,309;UBERON:0003978,8.64e-08,3;UBERON:0009751,8.64e-08,3;UBERON:0000946,8.64e-08,3;UBERON:0002523,8.64e-08,3;UBERON:0005983,8.64e-08,3;UBERON:0002165,8.64e-08,3;UBERON:0002062,8.64e-08,3;UBERON:0007280,8.64e-08,3;UBERON:0000923,8.10e-07,560;UBERON:0010316,8.10e-07,560;UBERON:0005291,8.10e-07,560;UBERON:0006598,8.10e-07,560;UBERON:0010317,8.10e-07,560;UBERON:0002532,8.10e-07,560 | |||
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| ||
|short_description=p1@LOC100505875 | |||
}} | }} |
Latest revision as of 21:13, 18 September 2015
Short description: | p1@LOC100505875 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100505875_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | -146bp_to_ENST00000509088, ENST00000510667, NR_038342, uc003hlr.1_5end |
EntrezGene: | LOC100505875 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 7.33e-08 | 3 |
fat cell | 8.68e-07 | 15 |