FFCP PHASE1:Hg19::chr1:66458305..66458316,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:66458305..66458316,+ to FFCP PHASE1:Hg19::chr1:66458305..66458316,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5142 | |EntrezGene=5142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |HGNC=8781 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000531358_5end | |||
|cluster_id=chr1:66458305..66458316,+ | |||
|coexpression_cluster_id=C1112 | |||
|description=CAGE_peak_13_at_PDE4B_5end | |||
|id=chr1:66458305..66458316,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.72e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.65e-20;82!UBERON:0010122;7.00e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.67e-88!57;UBERON:0005068!1.67e-88!57;UBERON:0006241!1.67e-88!57;UBERON:0007135!1.67e-88!57;UBERON:0001017!1.39e-79!82;UBERON:0005743!1.21e-77!86;UBERON:0000073!2.22e-76!94;UBERON:0001016!2.22e-76!94;UBERON:0002616!1.98e-74!59;UBERON:0002780!1.50e-72!41;UBERON:0001890!1.50e-72!41;UBERON:0006240!1.50e-72!41;UBERON:0003080!1.50e-70!42;UBERON:0000955!8.62e-66!69;UBERON:0006238!8.62e-66!69;UBERON:0002020!5.84e-64!34;UBERON:0003528!5.84e-64!34;UBERON:0001893!6.08e-64!34;UBERON:0002791!6.00e-62!33;UBERON:0003075!4.98e-60!86;UBERON:0007284!4.98e-60!86;UBERON:0001869!1.07e-59!32;UBERON:0002346!1.25e-56!90;UBERON:0003056!3.88e-47!61;UBERON:0007023!2.34e-46!115;UBERON:0000956!2.73e-46!25;UBERON:0000203!2.73e-46!25;UBERON:0004121!1.09e-44!169;UBERON:0000924!3.31e-43!173;UBERON:0006601!3.31e-43!173;UBERON:0002619!2.46e-41!22;UBERON:0000153!4.23e-40!129;UBERON:0007811!4.23e-40!129;UBERON:0000033!1.08e-39!123;UBERON:0001950!1.21e-37!20;UBERON:0000025!1.85e-21!194;UBERON:0002308!9.89e-19!9;UBERON:0000125!9.89e-19!9;UBERON:0003076!2.39e-18!15;UBERON:0003057!2.39e-18!15;UBERON:0002420!3.09e-18!9;UBERON:0007245!3.09e-18!9;UBERON:0010009!3.09e-18!9;UBERON:0010011!3.09e-18!9;UBERON:0000454!3.09e-18!9;UBERON:0004111!5.17e-18!241;UBERON:0001871!2.16e-15!7;UBERON:0004732!6.51e-15!13;UBERON:0009663!8.53e-15!7;UBERON:0000064!3.32e-14!219;UBERON:0000477!7.13e-14!286;UBERON:0002298!1.84e-13!8;UBERON:0004733!3.23e-13!12;UBERON:0002028!3.23e-13!12;UBERON:0007277!3.23e-13!12;UBERON:0000200!2.04e-12!6;UBERON:0000483!3.87e-12!309;UBERON:0000119!7.36e-12!312;UBERON:0000475!7.75e-11!365;UBERON:0000349!1.19e-10!5;UBERON:0001872!2.64e-10!5;UBERON:0001894!5.54e-10!7;UBERON:0006222!5.54e-10!7;UBERON:0002021!6.59e-10!5;UBERON:0000369!8.62e-09!4;UBERON:0002435!8.62e-09!4;UBERON:0000204!8.62e-09!4;UBERON:0010082!8.62e-09!4;UBERON:0002680!5.07e-08!9;UBERON:0001895!5.07e-08!9;UBERON:0010092!5.07e-08!9;UBERON:0006331!1.09e-07!3;UBERON:0000988!1.16e-07!3;UBERON:0001896!1.57e-07!3;UBERON:0005290!1.57e-07!3;UBERON:0010096!1.57e-07!3;UBERON:0000062!1.85e-07!511;UBERON:0002771!4.24e-07!3;UBERON:0002240!4.33e-07!3;UBERON:0000922!4.75e-07!612;UBERON:0005383!7.02e-07!3;UBERON:0005382!7.02e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.52e-76;34!UBERON:0003528;5.86e-76;34!UBERON:0002020;5.86e-76;34!UBERON:0002791;1.32e-75;32!UBERON:0001869;2.11e-75;32!UBERON:0000956;1.32e-63;25!UBERON:0000203;1.32e-63;25!UBERON:0002780;9.21e-63;41!UBERON:0001890;9.21e-63;41!UBERON:0002619;3.88e-61;22!UBERON:0000073;3.62e-57;53!UBERON:0002616;3.62e-57;53!UBERON:0001950;1.51e-55;20!UBERON:0001017;8.70e-35;75!UBERON:0001016;4.65e-31;83!UBERON:0000955;1.63e-30;68!UBERON:0000125;3.42e-27;9!UBERON:0002308;3.42e-27;9!UBERON:0002420;2.62e-26;9!UBERON:0007245;2.62e-26;9!UBERON:0010009;2.62e-26;9!UBERON:0010011;2.62e-26;9!UBERON:0000454;2.62e-26;9!UBERON:0009663;2.35e-21;7!UBERON:0001871;2.23e-19;6!UBERON:0002298;2.41e-19;6!UBERON:0004732;3.75e-18;13!UBERON:0000200;1.14e-17;6!UBERON:0004733;8.46e-16;12!UBERON:0002028;8.46e-16;12!UBERON:0000349;5.29e-15;5!UBERON:0007023;1.17e-14;114!UBERON:0001872;1.21e-14;5!UBERON:0002021;5.03e-14;5!UBERON:0000369;2.25e-12;4!UBERON:0002435;2.25e-12;4!UBERON:0000204;2.25e-12;4!UBERON:0011216;3.62e-11;132!UBERON:0000988;1.37e-10;3!UBERON:0001896;1.77e-10;3!UBERON:0005290;1.77e-10;3!UBERON:0001870;1.05e-09;3!UBERON:0005383;1.67e-09;3!UBERON:0005382;1.67e-09;3!UBERON:0002680;1.49e-08;9!UBERON:0001895;1.49e-08;9!UBERON:0001897;6.79e-08;2!UBERON:0010225;6.79e-08;2!UBERON:0001875;1.32e-07;2!UBERON:0006514;1.32e-07;2!UBERON:0010314;1.47e-07;132!UBERON:0002148;1.54e-07;2!UBERON:0006331;1.54e-07;2!UBERON:0009662;1.54e-07;2!UBERON:0005162;2.59e-07;2!UBERON:0000122;2.59e-07;2!UBERON:0001954;3.76e-07;2!UBERON:0003022;3.76e-07;2!UBERON:0002421;3.76e-07;2!UBERON:0002600;3.76e-07;2!UBERON:0002771;4.72e-07;2!UBERON:0001873;7.00e-07;2!UBERON:0002702;8.13e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.07e-107,56;UBERON:0005068,2.07e-107,56;UBERON:0006241,2.07e-107,56;UBERON:0007135,2.07e-107,56;UBERON:0000073,2.01e-103,53;UBERON:0002616,2.01e-103,53;UBERON:0001017,4.31e-91,81;UBERON:0003528,7.21e-90,34;UBERON:0002020,7.21e-90,34;UBERON:0001893,7.65e-90,34;UBERON:0002780,7.87e-89,41;UBERON:0001890,7.87e-89,41;UBERON:0003080,7.87e-89,41;UBERON:0006240,7.87e-89,41;UBERON:0001016,8.99e-88,89;UBERON:0002791,9.73e-84,32;UBERON:0001869,1.64e-83,32;UBERON:0000955,8.57e-81,68;UBERON:0006238,8.57e-81,68;UBERON:0003075,2.19e-73,82;UBERON:0007284,2.19e-73,82;UBERON:0002346,1.87e-69,86;UBERON:0000956,1.75e-63,25;UBERON:0000203,1.75e-63,25;UBERON:0002619,4.10e-61,22;UBERON:0003056,2.01e-60,61;UBERON:0010371,4.77e-58,104;UBERON:0001950,1.44e-55,20;UBERON:0007023,8.59e-48,114;UBERON:0004121,1.07e-45,171;UBERON:0000924,1.07e-45,171;UBERON:0006601,1.07e-45,171;UBERON:0010314,2.39e-43,132;UBERON:0011216,4.90e-35,223;UBERON:0000125,3.28e-27,9;UBERON:0002308,3.28e-27,9;UBERON:0002420,1.80e-26,9;UBERON:0007245,1.80e-26,9;UBERON:0010009,1.80e-26,9;UBERON:0010011,1.80e-26,9;UBERON:0000454,1.80e-26,9;UBERON:0000025,4.27e-26,192;UBERON:0009663,2.55e-21,7;UBERON:0004111,1.22e-20,240;UBERON:0003076,1.76e-19,15;UBERON:0003057,1.76e-19,15;UBERON:0001871,1.91e-19,6;UBERON:0002298,2.01e-19,6;UBERON:0004732,3.29e-18,13;UBERON:0000200,9.17e-18,6;UBERON:0004733,8.83e-16,12;UBERON:0002028,8.83e-16,12;UBERON:0007277,8.83e-16,12;UBERON:0000349,4.00e-15,5;UBERON:0001872,1.31e-14,5;UBERON:0000483,1.78e-14,306;UBERON:0000119,3.23e-14,309;UBERON:0002021,5.11e-14,5;UBERON:0000369,2.36e-12,4;UBERON:0002435,2.36e-12,4;UBERON:0000204,2.36e-12,4;UBERON:0010082,2.36e-12,4;UBERON:0000988,1.14e-10,3;UBERON:0001896,1.77e-10,3;UBERON:0005290,1.77e-10,3;UBERON:0010096,1.77e-10,3;UBERON:0001870,8.52e-10,3;UBERON:0005383,1.65e-09,3;UBERON:0005382,1.65e-09,3;UBERON:0002680,1.54e-08,9;UBERON:0001895,1.54e-08,9;UBERON:0010092,1.54e-08,9;UBERON:0001897,6.91e-08,2;UBERON:0010225,6.91e-08,2;UBERON:0002148,1.36e-07,2;UBERON:0001875,1.36e-07,2;UBERON:0006331,1.36e-07,2;UBERON:0009662,1.36e-07,2;UBERON:0006514,1.36e-07,2;UBERON:0000923,1.49e-07,560;UBERON:0010316,1.49e-07,560;UBERON:0005291,1.49e-07,560;UBERON:0006598,1.49e-07,560;UBERON:0010317,1.49e-07,560;UBERON:0002532,1.49e-07,560;UBERON:0005162,2.05e-07,2;UBERON:0000122,2.05e-07,2;UBERON:0002050,2.11e-07,564;UBERON:0001954,4.19e-07,2;UBERON:0003022,4.19e-07,2;UBERON:0002421,4.19e-07,2;UBERON:0002600,4.19e-07,2;UBERON:0002771,4.88e-07,2;UBERON:0002702,6.80e-07,2;UBERON:0001873,7.01e-07,2;UBERON:0010122,7.01e-07,2;UBERON:0001876,7.67e-07,2;UBERON:0005423,8.90e-07,581 | |||
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| ||
|short_description=p13@PDE4B | |||
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Latest revision as of 23:49, 18 September 2015
Short description: | p13@PDE4B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PDE4B_5end |
Coexpression cluster: | C1112_extraskeletal_corpus_Neural_thalamus_substantia_pons_medulla |
Association with transcript: | 6bp_to_ENST00000531358_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data