FFCP PHASE1:Hg19::chrX:110339439..110339450,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:110339439..110339450,+ to FFCP PHASE1:Hg19::chrX:110339439..110339450,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5063 | |EntrezGene=5063 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8592 | |HGNC=8592 | ||
|TSSclassifier=strong | |||
|UniProt=O75914 | |UniProt=O75914 | ||
|association_with_transcript=64bp_to_NM_002578,uc004eoz.2_5end | |||
|cluster_id=chrX:110339439..110339450,+ | |||
|description=CAGE_peak_3_at_PAK3_5end | |||
|id=chrX:110339439..110339450,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;3.27e-08;4!CL:0002222;3.27e-08;4!CL:0002224;3.27e-08;4!CL:0000064;1.51e-07;3!CL:0000067;1.51e-07;3!CL:0005012;1.51e-07;3!CL:0002304;1.51e-07;3!CL:0002605;7.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,4.10e-08,4;CL:0002222,4.10e-08,4;CL:0002224,4.10e-08,4;CL:0000064,1.45e-07,3;CL:0000067,1.45e-07,3;CL:0005012,1.45e-07,3;CL:0002304,1.45e-07,3;CL:0000047,4.56e-07,8;CL:0002605,8.09e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.46e-09;82!UBERON:0006241;4.30e-07;3!UBERON:0003057;4.30e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.30e-35!57;UBERON:0005068!4.30e-35!57;UBERON:0006241!4.30e-35!57;UBERON:0007135!4.30e-35!57;UBERON:0000073!2.57e-33!94;UBERON:0001016!2.57e-33!94;UBERON:0002346!5.15e-33!90;UBERON:0001017!2.21e-32!82;UBERON:0007023!3.59e-32!115;UBERON:0003075!3.78e-32!86;UBERON:0007284!3.78e-32!86;UBERON:0002780!4.64e-31!41;UBERON:0001890!4.64e-31!41;UBERON:0006240!4.64e-31!41;UBERON:0005743!8.37e-31!86;UBERON:0003080!6.56e-30!42;UBERON:0001869!3.14e-29!32;UBERON:0002020!7.56e-29!34;UBERON:0003528!7.56e-29!34;UBERON:0001893!3.46e-28!34;UBERON:0002616!4.16e-28!59;UBERON:0002791!2.49e-27!33;UBERON:0003056!3.45e-27!61;UBERON:0000955!9.88e-27!69;UBERON:0006238!9.88e-27!69;UBERON:0000956!5.30e-24!25;UBERON:0000203!5.30e-24!25;UBERON:0000153!6.11e-23!129;UBERON:0007811!6.11e-23!129;UBERON:0000924!2.10e-22!173;UBERON:0006601!2.10e-22!173;UBERON:0002619!9.58e-22!22;UBERON:0004121!1.80e-21!169;UBERON:0000033!2.06e-21!123;UBERON:0001950!9.18e-20!20;UBERON:0000025!2.94e-13!194;UBERON:0004111!8.97e-12!241;UBERON:0000477!1.61e-11!286;UBERON:0000483!4.78e-11!309;UBERON:0000119!1.29e-10!312;UBERON:0000481!2.13e-10!347;UBERON:0001871!8.89e-09!7;UBERON:0000475!1.27e-08!365;UBERON:0000922!1.69e-08!612;UBERON:0000064!3.77e-08!219;UBERON:0002050!4.65e-07!605;UBERON:0005423!4.65e-07!605;UBERON:0003076!9.30e-07!15;UBERON:0003057!9.30e-07!15;UBERON:0000200!9.39e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.45e-53;32!UBERON:0000956;1.84e-53;25!UBERON:0000203;1.84e-53;25!UBERON:0003528;3.29e-52;34!UBERON:0002020;3.29e-52;34!UBERON:0002791;2.36e-50;32!UBERON:0002619;3.60e-48;22!UBERON:0001893;1.51e-47;34!UBERON:0001950;1.48e-43;20!UBERON:0002780;2.67e-37;41!UBERON:0001890;2.67e-37;41!UBERON:0000073;1.20e-28;53!UBERON:0002616;1.20e-28;53!UBERON:0001017;1.24e-22;75!UBERON:0000955;3.06e-21;68!UBERON:0001016;4.82e-19;83!UBERON:0001871;5.72e-16;6!UBERON:0000200;1.60e-13;6!UBERON:0000349;1.17e-12;5!UBERON:0001872;2.22e-11;5!UBERON:0007625;5.05e-11;11!UBERON:0002021;7.83e-11;5!UBERON:0000488;3.53e-09;4!UBERON:0002298;4.41e-09;6!UBERON:0002420;5.71e-09;9!UBERON:0007245;5.71e-09;9!UBERON:0010009;5.71e-09;9!UBERON:0010011;5.71e-09;9!UBERON:0000454;5.71e-09;9!UBERON:0000125;7.60e-09;9!UBERON:0002308;7.60e-09;9!UBERON:0001801;2.33e-08;14!UBERON:0007023;2.61e-08;114!UBERON:0010077;3.27e-08;4!UBERON:0005389;3.27e-08;4!UBERON:0000484;3.27e-08;4!UBERON:0000965;3.27e-08;4!UBERON:0001803;3.27e-08;4!UBERON:0001870;4.83e-08;3!UBERON:0010314;9.05e-08;132!UBERON:0000988;9.97e-08;3!UBERON:0011216;1.04e-07;132!UBERON:0001778;1.51e-07;3!UBERON:0001775;1.51e-07;3!UBERON:0006947;2.88e-07;3!UBERON:0004054;2.88e-07;3!UBERON:0002240;4.30e-07;3!UBERON:0005174;4.30e-07;3!UBERON:0001137;4.30e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.11e-59,34;UBERON:0002020,1.11e-59,34;UBERON:0001869,1.50e-59,32;UBERON:0001049,8.72e-57,56;UBERON:0005068,8.72e-57,56;UBERON:0006241,8.72e-57,56;UBERON:0007135,8.72e-57,56;UBERON:0001016,2.71e-56,89;UBERON:0001017,4.52e-56,81;UBERON:0001893,1.38e-55,34;UBERON:0002791,1.61e-55,32;UBERON:0003075,5.42e-55,82;UBERON:0007284,5.42e-55,82;UBERON:0002346,2.76e-54,86;UBERON:0003056,8.14e-54,61;UBERON:0000956,8.45e-54,25;UBERON:0000203,8.45e-54,25;UBERON:0002780,9.32e-52,41;UBERON:0001890,9.32e-52,41;UBERON:0003080,9.32e-52,41;UBERON:0006240,9.32e-52,41;UBERON:0000073,2.00e-51,53;UBERON:0002616,2.00e-51,53;UBERON:0002619,1.62e-48,22;UBERON:0000955,4.63e-44,68;UBERON:0006238,4.63e-44,68;UBERON:0001950,7.00e-44,20;UBERON:0010371,2.08e-40,104;UBERON:0004121,4.69e-34,171;UBERON:0000924,4.69e-34,171;UBERON:0006601,4.69e-34,171;UBERON:0010314,2.03e-33,132;UBERON:0007023,2.44e-26,114;UBERON:0011216,1.58e-23,223;UBERON:0000025,1.15e-17,192;UBERON:0001871,3.07e-16,6;UBERON:0000200,1.31e-13,6;UBERON:0004111,6.83e-13,240;UBERON:0000349,9.79e-13,5;UBERON:0001872,1.62e-11,5;UBERON:0000483,2.15e-11,306;UBERON:0000119,3.87e-11,309;UBERON:0007625,7.59e-11,11;UBERON:0002021,9.07e-11,5;UBERON:0002420,4.63e-09,9;UBERON:0007245,4.63e-09,9;UBERON:0010009,4.63e-09,9;UBERON:0010011,4.63e-09,9;UBERON:0000454,4.63e-09,9;UBERON:0000488,5.08e-09,4;UBERON:0000125,7.98e-09,9;UBERON:0002308,7.98e-09,9;UBERON:0002298,9.83e-09,6;UBERON:0001801,3.18e-08,14;UBERON:0010077,4.10e-08,4;UBERON:0005389,4.10e-08,4;UBERON:0000484,4.10e-08,4;UBERON:0002546,4.10e-08,4;UBERON:0000965,4.10e-08,4;UBERON:0001803,4.10e-08,4;UBERON:0003073,4.10e-08,4;UBERON:0005426,4.10e-08,4;UBERON:0001870,5.46e-08,3;UBERON:0002050,6.95e-08,564;UBERON:0003076,7.18e-08,15;UBERON:0003057,7.18e-08,15;UBERON:0005423,1.38e-07,581;UBERON:0001778,1.45e-07,3;UBERON:0001775,1.45e-07,3;UBERON:0000922,1.49e-07,592;UBERON:0000988,1.55e-07,3;UBERON:0002240,3.83e-07,3;UBERON:0005174,3.83e-07,3;UBERON:0001137,3.83e-07,3;UBERON:0006947,4.46e-07,3;UBERON:0004054,4.46e-07,3;UBERON:0000923,5.07e-07,560;UBERON:0010316,5.07e-07,560;UBERON:0005291,5.07e-07,560;UBERON:0006598,5.07e-07,560;UBERON:0010317,5.07e-07,560;UBERON:0002532,5.07e-07,560;UBERON:0000019,5.84e-07,20;UBERON:0000047,5.84e-07,20;UBERON:0010312,5.84e-07,20;UBERON:0004088,5.84e-07,20;UBERON:0010230,5.84e-07,20;UBERON:0003072,5.84e-07,20;UBERON:0004128,5.84e-07,20;UBERON:0003071,5.84e-07,20 | |||
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| ||
|short_description=p3@PAK3 | |||
}} | }} |
Latest revision as of 01:20, 19 September 2015
Short description: | p3@PAK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAK3_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_NM_002578, uc004eoz.2_5end |
EntrezGene: | PAK3 |
HGNC: | 8592 |
UniProt: | O75914 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 4.10e-08 | 4 |
vertebrate lens cell | 4.10e-08 | 4 |
lens epithelial cell | 4.10e-08 | 4 |
ciliated cell | 1.45e-07 | 3 |
ciliated epithelial cell | 1.45e-07 | 3 |
multi-ciliated epithelial cell | 1.45e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.45e-07 | 3 |
neuronal stem cell | 4.56e-07 | 8 |
astrocyte of the cerebral cortex | 8.09e-07 | 3 |