FFCP PHASE1:Hg19::chr18:74692167..74692181,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:74692167..74692181,-
|short_description=p23@MBP
|description=CAGE_peak_23_at_MBP_5end
|association_with_transcript=-215bp_to_BC130034_5end
|EntrezGene=41...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4155 | |EntrezGene=4155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6925 | |HGNC=6925 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-215bp_to_BC130034_5end | |||
|cluster_id=chr18:74692167..74692181,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_23_at_MBP_5end | |||
|id=chr18:74692167..74692181,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.09e-25;82!UBERON:0006241;9.89e-16;3!UBERON:0003057;9.89e-16;3!UBERON:0002532;2.99e-08;206!UBERON:0010316;2.99e-08;206 | |||
|ontology_enrichment_disease=DOID:1909!2.08e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;8.05e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.22e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.44e-95!57;UBERON:0005068!1.44e-95!57;UBERON:0006241!1.44e-95!57;UBERON:0007135!1.44e-95!57;UBERON:0002616!6.73e-78!59;UBERON:0001017!3.30e-73!82;UBERON:0000955!6.01e-72!69;UBERON:0006238!6.01e-72!69;UBERON:0005743!2.21e-69!86;UBERON:0007023!2.18e-66!115;UBERON:0002780!8.53e-66!41;UBERON:0001890!8.53e-66!41;UBERON:0006240!8.53e-66!41;UBERON:0000073!3.01e-65!94;UBERON:0001016!3.01e-65!94;UBERON:0002020!3.83e-64!34;UBERON:0003528!3.83e-64!34;UBERON:0003080!4.46e-64!42;UBERON:0001893!7.72e-64!34;UBERON:0003075!2.23e-63!86;UBERON:0007284!2.23e-63!86;UBERON:0002791!7.31e-61!33;UBERON:0002346!4.00e-60!90;UBERON:0001869!1.92e-57!32;UBERON:0002619!3.93e-43!22;UBERON:0001950!2.57e-42!20;UBERON:0003056!5.73e-42!61;UBERON:0000033!1.35e-40!123;UBERON:0000153!2.99e-38!129;UBERON:0007811!2.99e-38!129;UBERON:0000956!1.31e-37!25;UBERON:0000203!1.31e-37!25;UBERON:0004121!3.99e-37!169;UBERON:0000924!5.07e-36!173;UBERON:0006601!5.07e-36!173;UBERON:0003076!1.60e-31!15;UBERON:0003057!1.60e-31!15;UBERON:0002308!7.73e-30!9;UBERON:0000125!7.73e-30!9;UBERON:0002420!6.63e-29!9;UBERON:0007245!6.63e-29!9;UBERON:0010009!6.63e-29!9;UBERON:0010011!6.63e-29!9;UBERON:0000454!6.63e-29!9;UBERON:0004732!2.96e-25!13;UBERON:0000025!1.23e-23!194;UBERON:0009663!4.26e-23!7;UBERON:0004733!4.62e-22!12;UBERON:0002028!4.62e-22!12;UBERON:0007277!4.62e-22!12;UBERON:0002298!1.51e-21!8;UBERON:0000200!9.20e-20!6;UBERON:0004111!4.29e-19!241;UBERON:0000477!2.33e-15!286;UBERON:0001871!1.33e-14!7;UBERON:0000483!2.67e-14!309;UBERON:0000119!4.68e-14!312;UBERON:0002680!2.84e-13!9;UBERON:0001895!2.84e-13!9;UBERON:0010092!2.84e-13!9;UBERON:0000369!3.57e-13!4;UBERON:0002435!3.57e-13!4;UBERON:0000204!3.57e-13!4;UBERON:0010082!3.57e-13!4;UBERON:0000064!5.22e-12!219;UBERON:0000475!5.54e-12!365;UBERON:0006331!6.62e-12!3;UBERON:0002240!8.19e-12!3;UBERON:0000988!1.29e-11!3;UBERON:0001896!1.71e-11!3;UBERON:0005290!1.71e-11!3;UBERON:0010096!1.71e-11!3;UBERON:0002021!1.95e-11!5;UBERON:0001872!4.57e-11!5;UBERON:0002771!8.82e-11!3;UBERON:0000349!9.78e-11!5;UBERON:0005383!2.31e-10!3;UBERON:0005382!2.31e-10!3;UBERON:0005162!1.75e-08!2;UBERON:0000122!1.75e-08!2;UBERON:0002148!1.82e-08!2;UBERON:0009662!1.82e-08!2;UBERON:0001897!2.59e-08!2;UBERON:0001875!2.99e-08!2;UBERON:0006514!2.99e-08!2;UBERON:0001870!1.31e-07!2;UBERON:0001873!1.35e-07!2;UBERON:0010122!1.35e-07!2;UBERON:0001876!1.65e-07!2;UBERON:0005174!3.18e-07!5;UBERON:0001137!3.18e-07!5;UBERON:0000062!6.04e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.28e-55;34!UBERON:0002619;2.97e-53;22!UBERON:0003528;2.24e-52;34!UBERON:0002020;2.24e-52;34!UBERON:0001950;8.49e-52;20!UBERON:0001869;2.75e-50;32!UBERON:0002791;1.97e-49;32!UBERON:0002780;8.24e-49;41!UBERON:0001890;8.24e-49;41!UBERON:0000073;4.76e-47;53!UBERON:0002616;4.76e-47;53!UBERON:0000956;1.15e-46;25!UBERON:0000203;1.15e-46;25!UBERON:0001017;7.43e-33;75!UBERON:0002298;6.02e-29;6!UBERON:0000955;1.73e-28;68!UBERON:0001016;9.69e-27;83!UBERON:0000200;1.16e-26;6!UBERON:0004732;5.99e-23;13!UBERON:0000125;3.35e-19;9!UBERON:0002308;3.35e-19;9!UBERON:0004733;4.96e-19;12!UBERON:0002028;4.96e-19;12!UBERON:0007023;1.82e-17;114!UBERON:0002240;9.89e-16;3!UBERON:0005174;9.89e-16;3!UBERON:0001137;9.89e-16;3!UBERON:0000988;2.00e-15;3!UBERON:0002021;2.45e-15;5!UBERON:0001896;2.67e-15;3!UBERON:0005290;2.67e-15;3!UBERON:0001872;8.46e-15;5!UBERON:0001870;7.10e-14;3!UBERON:0002420;3.98e-13;9!UBERON:0007245;3.98e-13;9!UBERON:0010009;3.98e-13;9!UBERON:0010011;3.98e-13;9!UBERON:0000454;3.98e-13;9!UBERON:0011216;2.18e-11;132!UBERON:0009663;2.37e-11;7!UBERON:0005162;4.11e-11;2!UBERON:0000122;4.11e-11;2!UBERON:0002148;4.43e-11;2!UBERON:0006331;4.43e-11;2!UBERON:0009662;4.43e-11;2!UBERON:0001897;6.72e-11;2!UBERON:0010225;6.72e-11;2!UBERON:0001875;7.96e-11;2!UBERON:0006514;7.96e-11;2!UBERON:0001871;1.09e-10;6!UBERON:0002771;2.57e-10;2!UBERON:0002702;8.05e-10;2!UBERON:0002680;7.83e-09;9!UBERON:0001895;7.83e-09;9!UBERON:0010314;5.72e-08;132!UBERON:0001894;5.82e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.21e-100,56;UBERON:0005068,2.21e-100,56;UBERON:0006241,2.21e-100,56;UBERON:0007135,2.21e-100,56;UBERON:0000073,5.45e-88,53;UBERON:0002616,5.45e-88,53;UBERON:0001017,2.95e-79,81;UBERON:0000955,2.29e-75,68;UBERON:0006238,2.29e-75,68;UBERON:0001016,5.60e-75,89;UBERON:0003075,6.34e-71,82;UBERON:0007284,6.34e-71,82;UBERON:0002780,3.34e-69,41;UBERON:0001890,3.34e-69,41;UBERON:0003080,3.34e-69,41;UBERON:0006240,3.34e-69,41;UBERON:0002346,2.54e-67,86;UBERON:0003528,5.97e-65,34;UBERON:0002020,5.97e-65,34;UBERON:0001893,1.37e-64,34;UBERON:0010371,6.34e-61,104;UBERON:0002791,8.70e-57,32;UBERON:0001869,1.82e-56,32;UBERON:0007023,8.01e-56,114;UBERON:0002619,2.19e-53,22;UBERON:0001950,6.31e-52,20;UBERON:0003056,5.67e-49,61;UBERON:0000956,8.83e-47,25;UBERON:0000203,8.83e-47,25;UBERON:0010314,5.28e-44,132;UBERON:0004121,3.10e-40,171;UBERON:0000924,3.10e-40,171;UBERON:0006601,3.10e-40,171;UBERON:0003076,7.39e-31,15;UBERON:0003057,7.39e-31,15;UBERON:0002298,6.02e-29,6;UBERON:0011216,2.04e-27,223;UBERON:0000200,1.01e-26,6;UBERON:0000025,2.11e-24,192;UBERON:0004732,6.17e-23,13;UBERON:0000125,3.15e-19,9;UBERON:0002308,3.15e-19,9;UBERON:0004733,5.11e-19,12;UBERON:0002028,5.11e-19,12;UBERON:0007277,5.11e-19,12;UBERON:0004111,4.92e-18,240;UBERON:0002240,1.01e-15,3;UBERON:0005174,1.01e-15,3;UBERON:0001137,1.01e-15,3;UBERON:0000483,1.01e-15,306;UBERON:0000119,1.72e-15,309;UBERON:0000988,1.91e-15,3;UBERON:0002021,2.40e-15,5;UBERON:0001896,2.81e-15,3;UBERON:0005290,2.81e-15,3;UBERON:0010096,2.81e-15,3;UBERON:0001872,7.86e-15,5;UBERON:0001870,6.20e-14,3;UBERON:0002420,3.51e-13,9;UBERON:0007245,3.51e-13,9;UBERON:0010009,3.51e-13,9;UBERON:0010011,3.51e-13,9;UBERON:0000454,3.51e-13,9;UBERON:0009663,2.31e-11,7;UBERON:0005162,4.02e-11,2;UBERON:0000122,4.02e-11,2;UBERON:0002148,4.22e-11,2;UBERON:0006331,4.22e-11,2;UBERON:0009662,4.22e-11,2;UBERON:0001897,6.88e-11,2;UBERON:0010225,6.88e-11,2;UBERON:0001875,8.36e-11,2;UBERON:0006514,8.36e-11,2;UBERON:0001871,9.32e-11,6;UBERON:0002771,2.76e-10,2;UBERON:0002702,8.06e-10,2;UBERON:0002680,7.83e-09,9;UBERON:0001895,7.83e-09,9;UBERON:0010092,7.83e-09,9;UBERON:0000923,1.84e-07,560;UBERON:0010316,1.84e-07,560;UBERON:0005291,1.84e-07,560;UBERON:0006598,1.84e-07,560;UBERON:0010317,1.84e-07,560;UBERON:0002532,1.84e-07,560;UBERON:0002050,2.38e-07,564;UBERON:0001894,5.88e-07,7;UBERON:0006222,5.88e-07,7;UBERON:0005423,6.88e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.82870241333667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72399471485697,6.86483926397699,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.964771509003264,3.05163472634166,0.442317039724898,0.886642856860642,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,9.43615861729479,0,25.0662956926113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,1.7727022867646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60462317580768,11.0893356902514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58786471611994,0,0,0,0,0,1.21499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1868615488782,11.3720037498713,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,1.77213635993397,3.41673541725497,1.3771002377715,8.027728739661,11.2038342052221,4.34674820589684,0,0,1.21319294033318,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07387654227596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,2.8339315265117,6.2257205032289,12.9223309471676,0,1.52145955421279,2.09918339321406,72.8124043321687,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16120270778863,4.68646859168308,2.06686796501184,1.52197944465376,0,0,0,0,0,0,0,0,0,0,0,0,3.39848664884159,1.97318320688547,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4160805799543,23.1696192255127,7.1851473689178,0,0,0,0,0,0,0,0,0,20.7842395569604,0,2.92363407820933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,9.12086383404657,10.3432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.82870241333667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72399471485697,6.86483926397699,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.964771509003264,3.05163472634166,0.442317039724898,0.886642856860642,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,9.43615861729479,0,25.0662956926113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,1.7727022867646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60462317580768,11.0893356902514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58786471611994,0,0,0,0,0,1.21499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1868615488782,11.3720037498713,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,1.77213635993397,3.41673541725497,1.3771002377715,8.027728739661,11.2038342052221,4.34674820589684,0,0,1.21319294033318,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07387654227596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,2.8339315265117,6.2257205032289,12.9223309471676,0,1.52145955421279,2.09918339321406,72.8124043321687,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16120270778863,4.68646859168308,2.06686796501184,1.52197944465376,0,0,0,0,0,0,0,0,0,0,0,0,3.39848664884159,1.97318320688547,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4160805799543,23.1696192255127,7.1851473689178,0,0,0,0,0,0,0,0,0,20.7842395569604,0,2.92363407820933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,9.12086383404657,10.3432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p23@MBP | |||
}} | }} |
Latest revision as of 17:05, 24 September 2015
Short description: | p23@MBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_MBP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -215bp_to_BC130034_5end |
EntrezGene: | MBP |
HGNC: | 6925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanoma | 1.22e-09 | 2 |