FFCP PHASE1:Hg19::chr7:108097059..108097079,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:108097059..108097079,- to FFCP PHASE1:Hg19::chr7:108097059..108097079,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4897 | |EntrezGene=4897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |HGNC=7994 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z670,Q92823,E9PDA4,Q14BM2 | |UniProt=B7Z670,Q92823,E9PDA4,Q14BM2 | ||
|association_with_transcript=-218bp_to_NM_001193582,NM_001193583,NM_001193584,NM_005010_5end | |||
|cluster_id=chr7:108097059..108097079,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_NRCAM_5end | |||
|id=chr7:108097059..108097079,- | |||
|ontology_enrichment_celltype=CL:0002139!2.42e-08!24;CL:0000071!2.35e-07!18;CL:0002546!2.35e-07!18 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.34e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.23e-42!57;UBERON:0005068!1.23e-42!57;UBERON:0006241!1.23e-42!57;UBERON:0007135!1.23e-42!57;UBERON:0001017!1.02e-37!82;UBERON:0002616!2.32e-35!59;UBERON:0005743!9.09e-35!86;UBERON:0000955!2.31e-33!69;UBERON:0006238!2.31e-33!69;UBERON:0002780!4.27e-33!41;UBERON:0001890!4.27e-33!41;UBERON:0006240!4.27e-33!41;UBERON:0003080!6.49e-32!42;UBERON:0003075!1.00e-31!86;UBERON:0007284!1.00e-31!86;UBERON:0000073!4.37e-31!94;UBERON:0001016!4.37e-31!94;UBERON:0001893!1.81e-29!34;UBERON:0002020!2.15e-29!34;UBERON:0003528!2.15e-29!34;UBERON:0002346!3.26e-29!90;UBERON:0002791!1.97e-28!33;UBERON:0001869!4.04e-28!32;UBERON:0004111!5.07e-28!241;UBERON:0000025!8.46e-28!194;UBERON:0000033!5.41e-27!123;UBERON:0000153!9.12e-27!129;UBERON:0007811!9.12e-27!129;UBERON:0000477!1.04e-24!286;UBERON:0003056!1.07e-24!61;UBERON:0000956!9.97e-24!25;UBERON:0000203!9.97e-24!25;UBERON:0007023!9.88e-22!115;UBERON:0002619!1.52e-21!22;UBERON:0004121!8.80e-21!169;UBERON:0000924!1.25e-19!173;UBERON:0006601!1.25e-19!173;UBERON:0001950!1.45e-19!20;UBERON:0000483!3.56e-19!309;UBERON:0000119!1.35e-18!312;UBERON:0000475!1.36e-15!365;UBERON:0003076!1.40e-11!15;UBERON:0003057!1.40e-11!15;UBERON:0000064!7.98e-11!219;UBERON:0000481!5.48e-10!347;UBERON:0000467!6.17e-10!625;UBERON:0000480!7.84e-10!626;UBERON:0000468!8.44e-10!659;UBERON:0004733!9.80e-10!12;UBERON:0002028!9.80e-10!12;UBERON:0007277!9.80e-10!12;UBERON:0000922!2.28e-09!612;UBERON:0000923!3.68e-09!604;UBERON:0005291!3.68e-09!604;UBERON:0006598!3.68e-09!604;UBERON:0002532!3.68e-09!604;UBERON:0002050!4.63e-09!605;UBERON:0005423!4.63e-09!605;UBERON:0004732!1.09e-08!13;UBERON:0000200!6.85e-08!6;UBERON:0002420!1.48e-07!9;UBERON:0007245!1.48e-07!9;UBERON:0010009!1.48e-07!9;UBERON:0010011!1.48e-07!9;UBERON:0000454!1.48e-07!9;UBERON:0001986!2.35e-07!18;UBERON:0004638!2.35e-07!18;UBERON:0004852!2.35e-07!18;UBERON:0002680!3.46e-07!9;UBERON:0001895!3.46e-07!9;UBERON:0010092!3.46e-07!9;UBERON:0002308!3.50e-07!9;UBERON:0000125!3.50e-07!9;UBERON:0001871!7.82e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.34e-58;32!UBERON:0003528;5.15e-56;34!UBERON:0002020;5.15e-56;34!UBERON:0002791;3.58e-54;32!UBERON:0001893;4.40e-53;34!UBERON:0000956;1.25e-52;25!UBERON:0000203;1.25e-52;25!UBERON:0002619;2.45e-50;22!UBERON:0002780;1.20e-45;41!UBERON:0001890;1.20e-45;41!UBERON:0001950;2.88e-45;20!UBERON:0000073;1.56e-41;53!UBERON:0002616;1.56e-41;53!UBERON:0001017;1.24e-26;75!UBERON:0000955;1.90e-26;68!UBERON:0001016;3.08e-21;83!UBERON:0000200;1.10e-17;6!UBERON:0002298;4.68e-15;6!UBERON:0000349;2.37e-14;5!UBERON:0001872;3.15e-14;5!UBERON:0002021;3.28e-14;5!UBERON:0002420;6.97e-14;9!UBERON:0007245;6.97e-14;9!UBERON:0010009;6.97e-14;9!UBERON:0010011;6.97e-14;9!UBERON:0000454;6.97e-14;9!UBERON:0000125;4.10e-13;9!UBERON:0002308;4.10e-13;9!UBERON:0004733;2.50e-12;12!UBERON:0002028;2.50e-12;12!UBERON:0007023;8.87e-12;114!UBERON:0004732;2.85e-11;13!UBERON:0000369;6.03e-11;4!UBERON:0002435;6.03e-11;4!UBERON:0000204;6.03e-11;4!UBERON:0001871;2.07e-10;6!UBERON:0001870;9.61e-10;3!UBERON:0009663;3.42e-09;7!UBERON:0001896;1.78e-08;3!UBERON:0005383;1.78e-08;3!UBERON:0005290;1.78e-08;3!UBERON:0005382;1.78e-08;3!UBERON:0000988;2.90e-08;3!UBERON:0006947;2.90e-08;3!UBERON:0004054;2.90e-08;3!UBERON:0011216;4.88e-08;132!UBERON:0002702;3.99e-07;2!UBERON:0002771;4.94e-07;2!UBERON:0001876;7.33e-07;2!UBERON:0002680;9.40e-07;9!UBERON:0001895;9.40e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.70e-75,53;UBERON:0002616,4.70e-75,53;UBERON:0001049,5.54e-74,56;UBERON:0005068,5.54e-74,56;UBERON:0006241,5.54e-74,56;UBERON:0007135,5.54e-74,56;UBERON:0001869,9.07e-65,32;UBERON:0003528,3.20e-64,34;UBERON:0002020,3.20e-64,34;UBERON:0002780,4.13e-64,41;UBERON:0001890,4.13e-64,41;UBERON:0003080,4.13e-64,41;UBERON:0006240,4.13e-64,41;UBERON:0000955,1.68e-61,68;UBERON:0006238,1.68e-61,68;UBERON:0001017,8.81e-61,81;UBERON:0001893,1.47e-60,34;UBERON:0002791,5.49e-60,32;UBERON:0001016,1.50e-53,89;UBERON:0000956,1.81e-52,25;UBERON:0000203,1.81e-52,25;UBERON:0002619,4.12e-50,22;UBERON:0003075,1.70e-49,82;UBERON:0007284,1.70e-49,82;UBERON:0002346,1.17e-46,86;UBERON:0001950,4.74e-45,20;UBERON:0003056,7.64e-43,61;UBERON:0007023,9.37e-37,114;UBERON:0010371,1.39e-36,104;UBERON:0010314,4.63e-31,132;UBERON:0000025,2.63e-29,192;UBERON:0004111,4.87e-25,240;UBERON:0004121,1.03e-24,171;UBERON:0000924,1.03e-24,171;UBERON:0006601,1.03e-24,171;UBERON:0011216,6.97e-20,223;UBERON:0000200,1.16e-17,6;UBERON:0002298,9.39e-15,6;UBERON:0000483,9.78e-15,306;UBERON:0000119,1.86e-14,309;UBERON:0000349,2.43e-14,5;UBERON:0002420,3.95e-14,9;UBERON:0007245,3.95e-14,9;UBERON:0010009,3.95e-14,9;UBERON:0010011,3.95e-14,9;UBERON:0000454,3.95e-14,9;UBERON:0002021,3.95e-14,5;UBERON:0001872,4.40e-14,5;UBERON:0000125,2.85e-13,9;UBERON:0002308,2.85e-13,9;UBERON:0004733,3.49e-12,12;UBERON:0002028,3.49e-12,12;UBERON:0007277,3.49e-12,12;UBERON:0003076,7.15e-12,15;UBERON:0003057,7.15e-12,15;UBERON:0000369,3.28e-11,4;UBERON:0002435,3.28e-11,4;UBERON:0000204,3.28e-11,4;UBERON:0010082,3.28e-11,4;UBERON:0004732,3.86e-11,13;UBERON:0001871,2.05e-10,6;UBERON:0001870,9.42e-10,3;UBERON:0009663,2.10e-09,7;UBERON:0005383,9.32e-09,3;UBERON:0005382,9.32e-09,3;UBERON:0006947,2.64e-08,3;UBERON:0004054,2.64e-08,3;UBERON:0001896,2.92e-08,3;UBERON:0005290,2.92e-08,3;UBERON:0010096,2.92e-08,3;UBERON:0000988,3.58e-08,3;UBERON:0002702,4.01e-07,2;UBERON:0002771,5.03e-07,2;UBERON:0000923,5.72e-07,560;UBERON:0010316,5.72e-07,560;UBERON:0005291,5.72e-07,560;UBERON:0006598,5.72e-07,560;UBERON:0010317,5.72e-07,560;UBERON:0002532,5.72e-07,560;UBERON:0001876,7.06e-07,2;UBERON:0002050,8.29e-07,564;UBERON:0002680,9.57e-07,9;UBERON:0001895,9.57e-07,9;UBERON:0010092,9.57e-07,9 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,5.33810257784248,1.50651167513763,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868946423296794,0,0,0,0,0,0,0,0,0.756278537312543,0.443458794925128,0.087834785693126,0.851363990735132,0,0,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,0.56530794192401,0.838998872419812,2.20094433552054,0.835979866147242,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0.488124115096339,1.83831540172934,0,0,0.673588117878509,0.788280363383256,1.53316637465883,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,1.06748995729705,0,0,0.808264032418128,1.14423332179421,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0.171567810298526,0.329250856225877,0,0,0.370353780634118,0,0,1.44331342025273,0.811512834825538,0.117408694235822,1.58803092537181,0.462985512576611,0.570762456703795,0.790204397959275,0.858486162094873,0,0,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0.621984346622316,1.72943944100354,0.75745460055828,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0.128343036279748,1.27047312111232,2.60279707715243,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0.15403067420883,0,0,0.422206515571503,0,0.340187410553031,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0.192190067365106,0.127612712494584,0,0,1.25924938732256,0,1.84820148105653,0,0,1.48259375283136,0.715624433709956,0,0,0,0,0,0,0,0,0,0,0.808729926293264,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,1.32687795048244,1.31535265576129,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.929015875628594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94732882989668,6.89280140411512,0.333926115068718,1.6480387422676,0,0,0,0.503865495708552,0.511343412510774,0,0,0,0,0,0.197286811273867,0,0,1.93866549219044,7.97805644191921,0,2.3438498497671,0,0,0,0,0,0,0.291604613383254,0,2.65722415744152,1.92954301800653,1.52581736317083,1.3269511191747,0.591095237907095,4.38770794307945,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0,0,0,0,0.611030144933625,0,0,0,0.808813595768125,0,2.10838001152805,0,0,0,3.15667522279512,0,0.30607276163049,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,1.57254001417827,0,0,0,0,0.193978032976839,0,0,0,0,7.53398471874956,0,0.400794101257669,0.85381197895741,0,0,0.114536596165916,0.343189995723929,0,0,0,0,0,0.101998217636322,0,0,1.50595916781192,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.295282444544246,0,6.36183751847443,4.90332262001672,0,0,0,0.674921674654501,0,7.16844768564691,0,0.315222829196793,0.314727528809989,0.105600336519406,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,1.58679122091228,1.02652102730598,0.704815022316672,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,2.51286554000375,15.9492272394057,9.2739961325492,13.520620516302,2.29363678276028,2.3295100822739,1.05563885000352,0,0.37494122388632,0,0.285465333544967,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0.477890301491107,0,0.155262956876259,0,0.265841714557995,0,0,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,4.86858885317099,0,0,12.4432592536558,0.584580926518165,0.132864840313363,0,0,0.245772908753719,0,0,0,0.344429959321631,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0.80057074828547,0,0,4.30335808146279,17.0035891590702,10.6954685568291,5.33302547025963,1.26035848110859,6.50078173163648,14.8557593981303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49667189264181,8.59185908475232,12.8145813830734,6.91232331113584,1.09394961803644,0,0,0,0.127762427639595,0.535701835878287,0.672567444437648,1.21393120847326,3.87025725297206,1.06442844195167,1.72850981333669,0,3.80630504670258,7.43232341260195,0,0,0.156986185701028,2.51384943865603,0.280272163313789,0,0.215927591218621,0,0,0,0.116241425368125,0,0,1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| ||
|short_description=p6@NRCAM | |||
}} | }} |
Latest revision as of 02:54, 25 September 2015
Short description: | p6@NRCAM |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NRCAM_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -218bp_to_NM_001193582, NM_001193583, NM_001193584, NM_005010_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | B7Z670Q92823E9PDA4Q14BM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data