FFCP PHASE1:Hg19::chr20:24449821..24449843,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79953 | |EntrezGene=79953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15885 | |HGNC=15885 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H7V2 | |UniProt=Q9H7V2 | ||
|association_with_transcript=0bp_to_ENST00000376862,NM_024893,uc002wtw.1_5end | |association_with_transcript=0bp_to_ENST00000376862,NM_024893,uc002wtw.1_5end | ||
|cluster_id=chr20:24449821..24449843,+ | |||
|coexpression_cluster_id=C1480 | |||
|description=CAGE_peak_4_at_SYNDIG1_5end | |description=CAGE_peak_4_at_SYNDIG1_5end | ||
|id=chr20:24449821..24449843,+ | |id=chr20:24449821..24449843,+ | ||
|ontology_enrichment_celltype=CL:0000133!8.33e-12!59;CL:0002319!1.15e-09!25;CL:0000221!6.83e-09!71;CL:0000333!9.06e-07!41 | |ontology_enrichment_celltype=CL:0000133!8.33e-12!59;CL:0002319!1.15e-09!25;CL:0000221!6.83e-09!71;CL:0000333!9.06e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002603;6.50e-09;3!CL:0000064;6.23e-08;3!CL:0000067;6.23e-08;3!CL:0005012;6.23e-08;3!CL:0002304;6.23e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,7.37e-09,3;CL:0000064,7.53e-08,3;CL:0000067,7.53e-08,3;CL:0005012,7.53e-08,3;CL:0002304,7.53e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.69e-13;82!UBERON:0006241;4.86e-09;3!UBERON:0003057;4.86e-09;3!UBERON:0006215;3.44e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.01e-57!94;UBERON:0001016!1.01e-57!94;UBERON:0001017!6.35e-57!82;UBERON:0005743!1.06e-54!86;UBERON:0001049!5.88e-51!57;UBERON:0005068!5.88e-51!57;UBERON:0006241!5.88e-51!57;UBERON:0007135!5.88e-51!57;UBERON:0002346!9.58e-47!90;UBERON:0003075!1.21e-46!86;UBERON:0007284!1.21e-46!86;UBERON:0000955!6.34e-46!69;UBERON:0006238!6.34e-46!69;UBERON:0002616!1.64e-45!59;UBERON:0000924!8.92e-37!173;UBERON:0006601!8.92e-37!173;UBERON:0004121!4.02e-36!169;UBERON:0002780!9.44e-35!41;UBERON:0001890!9.44e-35!41;UBERON:0006240!9.44e-35!41;UBERON:0003080!1.35e-33!42;UBERON:0003056!2.61e-32!61;UBERON:0007023!7.64e-32!115;UBERON:0001893!8.86e-32!34;UBERON:0002020!1.10e-31!34;UBERON:0003528!1.10e-31!34;UBERON:0002791!8.79e-31!33;UBERON:0001869!2.58e-29!32;UBERON:0000033!8.74e-28!123;UBERON:0000153!3.08e-27!129;UBERON:0007811!3.08e-27!129;UBERON:0000956!6.50e-25!25;UBERON:0000203!6.50e-25!25;UBERON:0002619!1.96e-24!22;UBERON:0001950!4.86e-22!20;UBERON:0003076!2.10e-18!15;UBERON:0003057!2.10e-18!15;UBERON:0004732!4.47e-16!13;UBERON:0004733!8.59e-15!12;UBERON:0002028!8.59e-15!12;UBERON:0007277!8.59e-15!12;UBERON:0002680!1.52e-11!9;UBERON:0001895!1.52e-11!9;UBERON:0010092!1.52e-11!9;UBERON:0000025!1.47e-10!194;UBERON:0000119!2.77e-09!312;UBERON:0000475!1.41e-08!365;UBERON:0000483!1.79e-08!309;UBERON:0002037!2.43e-08!6;UBERON:0006215!2.43e-08!6;UBERON:0000064!3.19e-08!219;UBERON:0002308!3.32e-08!9;UBERON:0000125!3.32e-08!9;UBERON:0002298!6.95e-08!8;UBERON:0000200!7.02e-08!6;UBERON:0001871!1.37e-07!7;UBERON:0002021!3.65e-07!5;UBERON:0001872!4.72e-07!5;UBERON:0000477!5.19e-07!286;UBERON:0004111!8.75e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.50e-49;22!UBERON:0000073;5.40e-47;53!UBERON:0002616;5.40e-47;53!UBERON:0000956;2.20e-46;25!UBERON:0000203;2.20e-46;25!UBERON:0001893;2.11e-45;34!UBERON:0003528;2.34e-45;34!UBERON:0002020;2.34e-45;34!UBERON:0001869;3.50e-45;32!UBERON:0002791;1.16e-44;32!UBERON:0001950;6.64e-44;20!UBERON:0002780;3.09e-43;41!UBERON:0001890;3.09e-43;41!UBERON:0004732;2.99e-31;13!UBERON:0000955;5.62e-30;68!UBERON:0001017;1.82e-29;75!UBERON:0004733;1.34e-28;12!UBERON:0002028;1.34e-28;12!UBERON:0001016;1.47e-28;83!UBERON:0002680;5.41e-22;9!UBERON:0001895;5.41e-22;9!UBERON:0002037;2.08e-15;6!UBERON:0002298;6.95e-15;6!UBERON:0000200;4.21e-14;6!UBERON:0002021;2.78e-13;5!UBERON:0001872;1.43e-12;5!UBERON:0001871;3.22e-12;6!UBERON:0011216;1.02e-10;132!UBERON:0000125;5.12e-10;9!UBERON:0002308;5.12e-10;9!UBERON:0007023;7.61e-10;114!UBERON:0010314;1.30e-09;132!UBERON:0002240;4.86e-09;3!UBERON:0005174;4.86e-09;3!UBERON:0001137;4.86e-09;3!UBERON:0000349;6.48e-09;5!UBERON:0001870;1.51e-08;3!UBERON:0000988;2.78e-08;3!UBERON:0001896;2.78e-08;3!UBERON:0005290;2.78e-08;3!UBERON:0001778;6.23e-08;3!UBERON:0001775;6.23e-08;3!UBERON:0002420;2.78e-07;9!UBERON:0007245;2.78e-07;9!UBERON:0010009;2.78e-07;9!UBERON:0010011;2.78e-07;9!UBERON:0000454;2.78e-07;9!UBERON:0005162;5.66e-07;2!UBERON:0000122;5.66e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.98e-94,56;UBERON:0005068,1.98e-94,56;UBERON:0006241,1.98e-94,56;UBERON:0007135,1.98e-94,56;UBERON:0000073,9.34e-87,53;UBERON:0002616,9.34e-87,53;UBERON:0001017,1.76e-85,81;UBERON:0001016,3.56e-85,89;UBERON:0003075,4.41e-82,82;UBERON:0007284,4.41e-82,82;UBERON:0002346,1.47e-80,86;UBERON:0000955,2.62e-77,68;UBERON:0006238,2.62e-77,68;UBERON:0010371,2.45e-69,104;UBERON:0002780,4.18e-59,41;UBERON:0001890,4.18e-59,41;UBERON:0003080,4.18e-59,41;UBERON:0006240,4.18e-59,41;UBERON:0003056,1.46e-56,61;UBERON:0001893,3.78e-55,34;UBERON:0003528,5.74e-55,34;UBERON:0002020,5.74e-55,34;UBERON:0004121,4.81e-53,171;UBERON:0000924,4.81e-53,171;UBERON:0006601,4.81e-53,171;UBERON:0010314,8.89e-52,132;UBERON:0002791,1.44e-50,32;UBERON:0001869,3.41e-50,32;UBERON:0002619,2.79e-49,22;UBERON:0000956,7.42e-47,25;UBERON:0000203,7.42e-47,25;UBERON:0001950,2.57e-44,20;UBERON:0003076,3.26e-36,15;UBERON:0003057,3.26e-36,15;UBERON:0004732,2.11e-31,13;UBERON:0007023,1.43e-29,114;UBERON:0004733,9.42e-29,12;UBERON:0002028,9.42e-29,12;UBERON:0007277,9.42e-29,12;UBERON:0011216,8.36e-28,223;UBERON:0002680,4.63e-22,9;UBERON:0001895,4.63e-22,9;UBERON:0010092,4.63e-22,9;UBERON:0000025,1.52e-18,192;UBERON:0002037,1.77e-15,6;UBERON:0006215,1.77e-15,6;UBERON:0002298,5.77e-15,6;UBERON:0000483,1.33e-14,306;UBERON:0000200,1.55e-14,6;UBERON:0000119,2.54e-14,309;UBERON:0002021,4.50e-13,5;UBERON:0001872,7.64e-13,5;UBERON:0001871,2.12e-12,6;UBERON:0004111,2.16e-12,240;UBERON:0000125,4.31e-10,9;UBERON:0002308,4.31e-10,9;UBERON:0002240,4.02e-09,3;UBERON:0005174,4.02e-09,3;UBERON:0001137,4.02e-09,3;UBERON:0000349,5.06e-09,5;UBERON:0001870,1.03e-08,3;UBERON:0001896,2.29e-08,3;UBERON:0005290,2.29e-08,3;UBERON:0010096,2.29e-08,3;UBERON:0000988,2.80e-08,3;UBERON:0000923,4.70e-08,560;UBERON:0010316,4.70e-08,560;UBERON:0005291,4.70e-08,560;UBERON:0006598,4.70e-08,560;UBERON:0010317,4.70e-08,560;UBERON:0002532,4.70e-08,560;UBERON:0002050,7.06e-08,564;UBERON:0001778,7.53e-08,3;UBERON:0001775,7.53e-08,3;UBERON:0000922,9.36e-08,592;UBERON:0002420,2.44e-07,9;UBERON:0007245,2.44e-07,9;UBERON:0010009,2.44e-07,9;UBERON:0010011,2.44e-07,9;UBERON:0000454,2.44e-07,9;UBERON:0005423,3.76e-07,581;UBERON:0005162,5.77e-07,2;UBERON:0000122,5.77e-07,2 | |||
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| ||
|short_description=p4@SYNDIG1 | |short_description=p4@SYNDIG1 | ||
}} | }} |
Latest revision as of 21:34, 24 September 2015
Short description: | p4@SYNDIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYNDIG1_5end |
Coexpression cluster: | C1480_optic_neuroectodermal_corpus_cerebellum_diencephalon_occipital_Astrocyte |
Association with transcript: | 0bp_to_ENST00000376862, NM_024893, uc002wtw.1_5end |
EntrezGene: | SYNDIG1 |
HGNC: | 15885 |
UniProt: | Q9H7V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 7.37e-09 | 3 |
ciliated cell | 7.53e-08 | 3 |
ciliated epithelial cell | 7.53e-08 | 3 |
multi-ciliated epithelial cell | 7.53e-08 | 3 |
non-pigmented ciliary epithelial cell | 7.53e-08 | 3 |