FFCP PHASE1:Hg19::chr17:935036..935083,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:935036..935083,-
|short_description=p4@ABR
|description=CAGE_peak_4_at_ABR_5end
|association_with_transcript=0bp_to_ENST00000543210,uc010vqf.1_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3S2 | |UniProt=F5H3S2 | ||
|association_with_transcript=0bp_to_ENST00000543210,uc010vqf.1_5end | |||
|cluster_id=chr17:935036..935083,- | |||
|coexpression_cluster_id=C2450 | |||
|description=CAGE_peak_4_at_ABR_5end | |||
|id=chr17:935036..935083,- | |||
|ontology_enrichment_celltype=CL:0000147!1.76e-12!14;CL:0000148!4.57e-09!10;CL:0000541!4.57e-09!10 | |||
|ontology_enrichment_celltype_v019=CL:0000147;1.11e-10;14!CL:0000149;4.36e-08;4!CL:0000148;2.16e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,8.56e-11,14;CL:0000149,4.16e-08,4;CL:0000148,1.69e-07,10;CL:0000541,1.69e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.44e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;5.15e-26;41!UBERON:0001890;5.15e-26;41!UBERON:0001893;1.96e-24;34!UBERON:0000073;1.19e-23;53!UBERON:0002616;1.19e-23;53!UBERON:0002619;1.27e-23;22!UBERON:0001869;4.03e-23;32!UBERON:0002791;9.97e-23;32!UBERON:0001950;1.51e-21;20!UBERON:0003528;1.58e-21;34!UBERON:0002020;1.58e-21;34!UBERON:0000956;3.95e-20;25!UBERON:0000203;3.95e-20;25!UBERON:0000955;8.49e-15;68!UBERON:0007023;8.96e-15;114!UBERON:0001017;1.08e-13;75!UBERON:0001016;3.51e-11;83!UBERON:0001894;1.37e-10;7!UBERON:0000966;9.54e-10;5!UBERON:0005388;9.54e-10;5!UBERON:0001802;9.54e-10;5!UBERON:0000200;1.21e-09;6!UBERON:0002420;4.86e-09;9!UBERON:0007245;4.86e-09;9!UBERON:0010009;4.86e-09;9!UBERON:0010011;4.86e-09;9!UBERON:0000454;4.86e-09;9!UBERON:0001871;1.09e-07;6!UBERON:0000349;1.75e-07;5!UBERON:0003296;3.21e-07;4!UBERON:0010133;3.21e-07;4!UBERON:0002784;4.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.59e-63,114;UBERON:0001049,1.78e-42,56;UBERON:0005068,1.78e-42,56;UBERON:0006241,1.78e-42,56;UBERON:0007135,1.78e-42,56;UBERON:0000073,2.07e-41,53;UBERON:0002616,2.07e-41,53;UBERON:0003075,2.93e-40,82;UBERON:0007284,2.93e-40,82;UBERON:0002346,1.39e-37,86;UBERON:0002780,5.86e-37,41;UBERON:0001890,5.86e-37,41;UBERON:0003080,5.86e-37,41;UBERON:0006240,5.86e-37,41;UBERON:0000955,2.63e-34,68;UBERON:0006238,2.63e-34,68;UBERON:0003056,4.92e-34,61;UBERON:0001017,7.15e-34,81;UBERON:0001016,2.27e-30,89;UBERON:0010371,1.24e-29,104;UBERON:0001893,3.91e-28,34;UBERON:0010314,4.05e-27,132;UBERON:0001869,6.60e-26,32;UBERON:0002791,1.55e-25,32;UBERON:0003528,2.34e-25,34;UBERON:0002020,2.34e-25,34;UBERON:0002619,8.66e-24,22;UBERON:0001950,1.32e-21,20;UBERON:0000956,2.82e-20,25;UBERON:0000203,2.82e-20,25;UBERON:0004121,5.85e-19,171;UBERON:0000924,5.85e-19,171;UBERON:0006601,5.85e-19,171;UBERON:0011216,3.54e-14,223;UBERON:0001894,1.54e-10,7;UBERON:0006222,1.54e-10,7;UBERON:0000025,2.06e-10,192;UBERON:0000200,1.36e-09,6;UBERON:0002420,3.06e-09,9;UBERON:0007245,3.06e-09,9;UBERON:0010009,3.06e-09,9;UBERON:0010011,3.06e-09,9;UBERON:0000454,3.06e-09,9;UBERON:0004111,5.57e-09,240;UBERON:0000966,5.73e-08,6;UBERON:0005388,5.73e-08,6;UBERON:0001802,5.73e-08,6;UBERON:0000483,9.25e-08,306;UBERON:0000349,9.43e-08,5;UBERON:0001871,1.06e-07,6;UBERON:0000119,1.61e-07,309;UBERON:0003076,2.21e-07,15;UBERON:0003057,2.21e-07,15;UBERON:0003296,2.71e-07,4;UBERON:0010133,2.71e-07,4;UBERON:0000922,4.14e-07,592;UBERON:0002050,5.35e-07,564;UBERON:0002784,5.84e-07,4;UBERON:0000923,7.37e-07,560;UBERON:0010316,7.37e-07,560;UBERON:0005291,7.37e-07,560;UBERON:0006598,7.37e-07,560;UBERON:0010317,7.37e-07,560;UBERON:0002532,7.37e-07,560;UBERON:0005423,7.57e-07,581;UBERON:0009663,9.99e-07,7 | |||
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| ||
|short_description=p4@ABR | |||
}} | }} |
Latest revision as of 16:54, 18 September 2015
Short description: | p4@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ABR_5end |
Coexpression cluster: | C2450_Retinal_pineal_retina_Melanocyte_occipital_eye_Pericytes |
Association with transcript: | 0bp_to_ENST00000543210, uc010vqf.1_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | F5H3S2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 8.56e-11 | 14 |
visual pigment cell | 4.16e-08 | 4 |
melanocyte | 1.69e-07 | 10 |
melanoblast | 1.69e-07 | 10 |