FFCP PHASE1:Hg19::chr6:158438104..158438198,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8871 | |EntrezGene=8871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11504 | |HGNC=11504 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003qqy.1_5end | |association_with_transcript=0bp_to_uc003qqy.1_5end | ||
|cluster_id=chr6:158438104..158438198,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_2_at_SYNJ2_5end | |description=CAGE_peak_2_at_SYNJ2_5end | ||
|id=chr6:158438104..158438198,+ | |id=chr6:158438104..158438198,+ | ||
|ontology_enrichment_celltype=CL:0002139!4.55e-11!24;CL:0000115!3.43e-09!35;CL:0002078!1.27e-07!44;CL:0000071!2.77e-07!18;CL:0002546!2.77e-07!18;CL:0000128!4.11e-07!7;CL:0000126!4.11e-07!7;CL:0000127!4.11e-07!7;CL:0002453!4.11e-07!7 | |ontology_enrichment_celltype=CL:0002139!4.55e-11!24;CL:0000115!3.43e-09!35;CL:0002078!1.27e-07!44;CL:0000071!2.77e-07!18;CL:0002546!2.77e-07!18;CL:0000128!4.11e-07!7;CL:0000126!4.11e-07!7;CL:0000127!4.11e-07!7;CL:0002453!4.11e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.83e-10;24!CL:0000115;2.95e-09;36!CL:0000071;3.95e-07;18!CL:0000128;9.33e-07;7!CL:0000126;9.33e-07;7!CL:0000127;9.33e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.74e-10,24;CL:0000115,4.43e-10,36;CL:0002078,1.64e-09,45;CL:0000071,4.15e-07,18;CL:0002546,4.15e-07,18;CL:0000128,8.85e-07,7;CL:0000126,8.85e-07,7;CL:0000127,8.85e-07,7;CL:0002453,8.85e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.19e-11;82!CL:0002546;3.95e-07;18!UBERON:0006241;6.57e-07;3!UBERON:0003057;6.57e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.76e-40!57;UBERON:0005068!3.76e-40!57;UBERON:0006241!3.76e-40!57;UBERON:0007135!3.76e-40!57;UBERON:0001017!2.22e-38!82;UBERON:0005743!1.22e-36!86;UBERON:0003075!3.62e-36!86;UBERON:0007284!3.62e-36!86;UBERON:0002616!2.58e-35!59;UBERON:0002346!1.06e-34!90;UBERON:0000955!4.01e-34!69;UBERON:0006238!4.01e-34!69;UBERON:0000073!1.03e-33!94;UBERON:0001016!1.03e-33!94;UBERON:0007023!2.21e-33!115;UBERON:0001893!3.56e-30!34;UBERON:0002020!3.70e-30!34;UBERON:0003528!3.70e-30!34;UBERON:0002791!3.98e-29!33;UBERON:0002780!1.44e-28!41;UBERON:0001890!1.44e-28!41;UBERON:0006240!1.44e-28!41;UBERON:0001869!5.35e-28!32;UBERON:0003080!1.57e-27!42;UBERON:0000025!8.84e-27!194;UBERON:0000477!2.35e-25!286;UBERON:0004111!1.50e-24!241;UBERON:0003056!1.91e-24!61;UBERON:0000153!5.36e-23!129;UBERON:0007811!5.36e-23!129;UBERON:0000033!2.90e-22!123;UBERON:0000119!4.68e-22!312;UBERON:0000956!7.16e-22!25;UBERON:0000203!7.16e-22!25;UBERON:0000483!6.99e-21!309;UBERON:0002619!5.74e-20!22;UBERON:0004121!1.93e-19!169;UBERON:0000924!4.55e-19!173;UBERON:0006601!4.55e-19!173;UBERON:0001950!4.89e-18!20;UBERON:0000475!6.12e-15!365;UBERON:0003076!1.18e-13!15;UBERON:0003057!1.18e-13!15;UBERON:0000467!3.99e-12!625;UBERON:0000480!5.16e-12!626;UBERON:0004732!8.69e-12!13;UBERON:0000468!1.17e-11!659;UBERON:0004733!1.02e-10!12;UBERON:0002028!1.02e-10!12;UBERON:0007277!1.02e-10!12;UBERON:0000064!1.53e-10!219;UBERON:0000481!8.33e-10!347;UBERON:0002308!1.04e-09!9;UBERON:0000125!1.04e-09!9;UBERON:0002420!1.31e-09!9;UBERON:0007245!1.31e-09!9;UBERON:0010009!1.31e-09!9;UBERON:0010011!1.31e-09!9;UBERON:0000454!1.31e-09!9;UBERON:0002049!4.38e-09!79;UBERON:0007798!4.38e-09!79;UBERON:0004535!7.39e-09!110;UBERON:0001009!9.96e-09!113;UBERON:0004872!1.62e-08!84;UBERON:0009663!1.24e-07!7;UBERON:0002298!1.27e-07!8;UBERON:0002680!1.27e-07!9;UBERON:0001895!1.27e-07!9;UBERON:0010092!1.27e-07!9;UBERON:0000055!1.92e-07!69;UBERON:0000200!2.56e-07!6;UBERON:0001986!2.77e-07!18;UBERON:0004638!2.77e-07!18;UBERON:0004852!2.77e-07!18 | |ontology_enrichment_uberon=UBERON:0001049!3.76e-40!57;UBERON:0005068!3.76e-40!57;UBERON:0006241!3.76e-40!57;UBERON:0007135!3.76e-40!57;UBERON:0001017!2.22e-38!82;UBERON:0005743!1.22e-36!86;UBERON:0003075!3.62e-36!86;UBERON:0007284!3.62e-36!86;UBERON:0002616!2.58e-35!59;UBERON:0002346!1.06e-34!90;UBERON:0000955!4.01e-34!69;UBERON:0006238!4.01e-34!69;UBERON:0000073!1.03e-33!94;UBERON:0001016!1.03e-33!94;UBERON:0007023!2.21e-33!115;UBERON:0001893!3.56e-30!34;UBERON:0002020!3.70e-30!34;UBERON:0003528!3.70e-30!34;UBERON:0002791!3.98e-29!33;UBERON:0002780!1.44e-28!41;UBERON:0001890!1.44e-28!41;UBERON:0006240!1.44e-28!41;UBERON:0001869!5.35e-28!32;UBERON:0003080!1.57e-27!42;UBERON:0000025!8.84e-27!194;UBERON:0000477!2.35e-25!286;UBERON:0004111!1.50e-24!241;UBERON:0003056!1.91e-24!61;UBERON:0000153!5.36e-23!129;UBERON:0007811!5.36e-23!129;UBERON:0000033!2.90e-22!123;UBERON:0000119!4.68e-22!312;UBERON:0000956!7.16e-22!25;UBERON:0000203!7.16e-22!25;UBERON:0000483!6.99e-21!309;UBERON:0002619!5.74e-20!22;UBERON:0004121!1.93e-19!169;UBERON:0000924!4.55e-19!173;UBERON:0006601!4.55e-19!173;UBERON:0001950!4.89e-18!20;UBERON:0000475!6.12e-15!365;UBERON:0003076!1.18e-13!15;UBERON:0003057!1.18e-13!15;UBERON:0000467!3.99e-12!625;UBERON:0000480!5.16e-12!626;UBERON:0004732!8.69e-12!13;UBERON:0000468!1.17e-11!659;UBERON:0004733!1.02e-10!12;UBERON:0002028!1.02e-10!12;UBERON:0007277!1.02e-10!12;UBERON:0000064!1.53e-10!219;UBERON:0000481!8.33e-10!347;UBERON:0002308!1.04e-09!9;UBERON:0000125!1.04e-09!9;UBERON:0002420!1.31e-09!9;UBERON:0007245!1.31e-09!9;UBERON:0010009!1.31e-09!9;UBERON:0010011!1.31e-09!9;UBERON:0000454!1.31e-09!9;UBERON:0002049!4.38e-09!79;UBERON:0007798!4.38e-09!79;UBERON:0004535!7.39e-09!110;UBERON:0001009!9.96e-09!113;UBERON:0004872!1.62e-08!84;UBERON:0009663!1.24e-07!7;UBERON:0002298!1.27e-07!8;UBERON:0002680!1.27e-07!9;UBERON:0001895!1.27e-07!9;UBERON:0010092!1.27e-07!9;UBERON:0000055!1.92e-07!69;UBERON:0000200!2.56e-07!6;UBERON:0001986!2.77e-07!18;UBERON:0004638!2.77e-07!18;UBERON:0004852!2.77e-07!18 | ||
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| ||
|short_description=p2@SYNJ2 | |short_description=p2@SYNJ2 | ||
}} | }} |
Latest revision as of 11:11, 16 September 2015
Short description: | p2@SYNJ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYNJ2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_uc003qqy.1_5end |
EntrezGene: | SYNJ2 |
HGNC: | 11504 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.74e-10 | 24 |
endothelial cell | 4.43e-10 | 36 |
meso-epithelial cell | 1.64e-09 | 45 |
blood vessel endothelial cell | 4.15e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.15e-07 | 18 |
oligodendrocyte | 8.85e-07 | 7 |
macroglial cell | 8.85e-07 | 7 |
astrocyte | 8.85e-07 | 7 |
oligodendrocyte precursor cell | 8.85e-07 | 7 |