FFCP PHASE1:Hg19::chr7:54610124..54610198,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222008 | |EntrezGene=222008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28499 | |HGNC=28499 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAG5 | |UniProt=Q8TAG5 | ||
|association_with_transcript=0bp_to_ENST00000402026_5end | |association_with_transcript=0bp_to_ENST00000402026_5end | ||
|cluster_id=chr7:54610124..54610198,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_VSTM2A_5end | |description=CAGE_peak_1_at_VSTM2A_5end | ||
|id=chr7:54610124..54610198,+ | |id=chr7:54610124..54610198,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.08e-20;82!UBERON:0006241;5.79e-09;3!UBERON:0003057;5.79e-09;3!UBERON:0010122;4.57e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;2.31e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.38e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.28e-70!57;UBERON:0005068!2.28e-70!57;UBERON:0006241!2.28e-70!57;UBERON:0007135!2.28e-70!57;UBERON:0001017!4.92e-66!82;UBERON:0002780!4.30e-65!41;UBERON:0001890!4.30e-65!41;UBERON:0006240!4.30e-65!41;UBERON:0005743!8.17e-65!86;UBERON:0000073!1.74e-64!94;UBERON:0001016!1.74e-64!94;UBERON:0003080!2.71e-63!42;UBERON:0001893!8.41e-60!34;UBERON:0002020!1.11e-59!34;UBERON:0003528!1.11e-59!34;UBERON:0002616!3.09e-58!59;UBERON:0002791!1.19e-57!33;UBERON:0000955!1.23e-57!69;UBERON:0006238!1.23e-57!69;UBERON:0001869!2.04e-56!32;UBERON:0002346!5.67e-52!90;UBERON:0003075!1.10e-50!86;UBERON:0007284!1.10e-50!86;UBERON:0002619!6.76e-49!22;UBERON:0007023!2.71e-46!115;UBERON:0001950!5.90e-45!20;UBERON:0003056!1.40e-42!61;UBERON:0000956!2.31e-42!25;UBERON:0000203!2.31e-42!25;UBERON:0000924!1.61e-36!173;UBERON:0006601!1.61e-36!173;UBERON:0004121!4.58e-35!169;UBERON:0000033!3.01e-32!123;UBERON:0000153!4.47e-30!129;UBERON:0007811!4.47e-30!129;UBERON:0002420!4.44e-19!9;UBERON:0007245!4.44e-19!9;UBERON:0010009!4.44e-19!9;UBERON:0010011!4.44e-19!9;UBERON:0000454!4.44e-19!9;UBERON:0002308!1.74e-18!9;UBERON:0000125!1.74e-18!9;UBERON:0001871!1.27e-17!7;UBERON:0000025!4.70e-17!194;UBERON:0009663!7.77e-15!7;UBERON:0000200!3.11e-14!6;UBERON:0004111!1.07e-13!241;UBERON:0002021!4.16e-12!5;UBERON:0001872!6.47e-12!5;UBERON:0002298!7.01e-12!8;UBERON:0000349!8.22e-12!5;UBERON:0000477!1.70e-10!286;UBERON:0000064!2.17e-10!219;UBERON:0003076!8.64e-10!15;UBERON:0003057!8.64e-10!15;UBERON:0000369!9.96e-10!4;UBERON:0002435!9.96e-10!4;UBERON:0000204!9.96e-10!4;UBERON:0010082!9.96e-10!4;UBERON:0000922!1.41e-09!612;UBERON:0000483!3.34e-09!309;UBERON:0000475!5.31e-09!365;UBERON:0000119!5.62e-09!312;UBERON:0000062!1.17e-08!511;UBERON:0000923!2.32e-08!604;UBERON:0005291!2.32e-08!604;UBERON:0006598!2.32e-08!604;UBERON:0002532!2.32e-08!604;UBERON:0002050!2.60e-08!605;UBERON:0005423!2.60e-08!605;UBERON:0000481!7.45e-08!347;UBERON:0002771!8.28e-08!3;UBERON:0005383!1.05e-07!3;UBERON:0005382!1.05e-07!3;UBERON:0001894!2.78e-07!7;UBERON:0006222!2.78e-07!7;UBERON:0000468!2.81e-07!659;UBERON:0002240!4.62e-07!3;UBERON:0000988!4.81e-07!3;UBERON:0000467!6.65e-07!625;UBERON:0000480!7.39e-07!626;UBERON:0006331!7.73e-07!3;UBERON:0001896!7.89e-07!3;UBERON:0005290!7.89e-07!3;UBERON:0010096!7.89e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!2.28e-70!57;UBERON:0005068!2.28e-70!57;UBERON:0006241!2.28e-70!57;UBERON:0007135!2.28e-70!57;UBERON:0001017!4.92e-66!82;UBERON:0002780!4.30e-65!41;UBERON:0001890!4.30e-65!41;UBERON:0006240!4.30e-65!41;UBERON:0005743!8.17e-65!86;UBERON:0000073!1.74e-64!94;UBERON:0001016!1.74e-64!94;UBERON:0003080!2.71e-63!42;UBERON:0001893!8.41e-60!34;UBERON:0002020!1.11e-59!34;UBERON:0003528!1.11e-59!34;UBERON:0002616!3.09e-58!59;UBERON:0002791!1.19e-57!33;UBERON:0000955!1.23e-57!69;UBERON:0006238!1.23e-57!69;UBERON:0001869!2.04e-56!32;UBERON:0002346!5.67e-52!90;UBERON:0003075!1.10e-50!86;UBERON:0007284!1.10e-50!86;UBERON:0002619!6.76e-49!22;UBERON:0007023!2.71e-46!115;UBERON:0001950!5.90e-45!20;UBERON:0003056!1.40e-42!61;UBERON:0000956!2.31e-42!25;UBERON:0000203!2.31e-42!25;UBERON:0000924!1.61e-36!173;UBERON:0006601!1.61e-36!173;UBERON:0004121!4.58e-35!169;UBERON:0000033!3.01e-32!123;UBERON:0000153!4.47e-30!129;UBERON:0007811!4.47e-30!129;UBERON:0002420!4.44e-19!9;UBERON:0007245!4.44e-19!9;UBERON:0010009!4.44e-19!9;UBERON:0010011!4.44e-19!9;UBERON:0000454!4.44e-19!9;UBERON:0002308!1.74e-18!9;UBERON:0000125!1.74e-18!9;UBERON:0001871!1.27e-17!7;UBERON:0000025!4.70e-17!194;UBERON:0009663!7.77e-15!7;UBERON:0000200!3.11e-14!6;UBERON:0004111!1.07e-13!241;UBERON:0002021!4.16e-12!5;UBERON:0001872!6.47e-12!5;UBERON:0002298!7.01e-12!8;UBERON:0000349!8.22e-12!5;UBERON:0000477!1.70e-10!286;UBERON:0000064!2.17e-10!219;UBERON:0003076!8.64e-10!15;UBERON:0003057!8.64e-10!15;UBERON:0000369!9.96e-10!4;UBERON:0002435!9.96e-10!4;UBERON:0000204!9.96e-10!4;UBERON:0010082!9.96e-10!4;UBERON:0000922!1.41e-09!612;UBERON:0000483!3.34e-09!309;UBERON:0000475!5.31e-09!365;UBERON:0000119!5.62e-09!312;UBERON:0000062!1.17e-08!511;UBERON:0000923!2.32e-08!604;UBERON:0005291!2.32e-08!604;UBERON:0006598!2.32e-08!604;UBERON:0002532!2.32e-08!604;UBERON:0002050!2.60e-08!605;UBERON:0005423!2.60e-08!605;UBERON:0000481!7.45e-08!347;UBERON:0002771!8.28e-08!3;UBERON:0005383!1.05e-07!3;UBERON:0005382!1.05e-07!3;UBERON:0001894!2.78e-07!7;UBERON:0006222!2.78e-07!7;UBERON:0000468!2.81e-07!659;UBERON:0002240!4.62e-07!3;UBERON:0000988!4.81e-07!3;UBERON:0000467!6.65e-07!625;UBERON:0000480!7.39e-07!626;UBERON:0006331!7.73e-07!3;UBERON:0001896!7.89e-07!3;UBERON:0005290!7.89e-07!3;UBERON:0010096!7.89e-07!3 | ||
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|short_description=p1@VSTM2A | |short_description=p1@VSTM2A | ||
}} | }} |
Latest revision as of 00:03, 19 September 2015
Short description: | p1@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VSTM2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000402026_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | Q8TAG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.38e-07 | 6 |