FFCP PHASE1:Hg19::chr9:139876143..139876170,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401562 | |EntrezGene=401562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34436 | |HGNC=34436 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z3E7 | |UniProt=F2Z3E7 | ||
|association_with_transcript=-185bp_to_ENST00000482657_5end | |association_with_transcript=-185bp_to_ENST00000482657_5end | ||
|cluster_id=chr9:139876143..139876170,+ | |||
|coexpression_cluster_id=C368 | |coexpression_cluster_id=C368 | ||
|description=CAGE_peak_1_at_LCNL1_5end | |description=CAGE_peak_1_at_LCNL1_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002575;3.67e-08;2 | |ontology_enrichment_celltype_v019=CL:0002575;3.67e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002575,3.62e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.30e-16;82!UBERON:0006241;3.41e-11;3!UBERON:0003057;3.41e-11;3!UBERON:0010122;3.62e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;6.30e-16;82!UBERON:0006241;3.41e-11;3!UBERON:0003057;3.41e-11;3!UBERON:0010122;3.62e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-78!115;UBERON:0001049!2.27e-54!57;UBERON:0005068!2.27e-54!57;UBERON:0006241!2.27e-54!57;UBERON:0007135!2.27e-54!57;UBERON:0002616!6.75e-49!59;UBERON:0005743!3.61e-45!86;UBERON:0001017!5.19e-44!82;UBERON:0002780!5.52e-44!41;UBERON:0001890!5.52e-44!41;UBERON:0006240!5.52e-44!41;UBERON:0003075!1.01e-43!86;UBERON:0007284!1.01e-43!86;UBERON:0000955!2.61e-43!69;UBERON:0006238!2.61e-43!69;UBERON:0003080!1.14e-42!42;UBERON:0002346!1.37e-42!90;UBERON:0000073!2.92e-41!94;UBERON:0001016!2.92e-41!94;UBERON:0002020!3.66e-34!34;UBERON:0003528!3.66e-34!34;UBERON:0001893!6.55e-34!34;UBERON:0002791!1.46e-32!33;UBERON:0001869!1.01e-30!32;UBERON:0003056!1.58e-29!61;UBERON:0002619!5.94e-25!22;UBERON:0000153!1.20e-23!129;UBERON:0007811!1.20e-23!129;UBERON:0000033!1.75e-23!123;UBERON:0001950!5.52e-22!20;UBERON:0004121!6.37e-22!169;UBERON:0000924!7.62e-22!173;UBERON:0006601!7.62e-22!173;UBERON:0000956!2.53e-21!25;UBERON:0000203!2.53e-21!25;UBERON:0000025!1.62e-15!194;UBERON:0002308!5.43e-15!9;UBERON:0000125!5.43e-15!9;UBERON:0002420!1.03e-14!9;UBERON:0007245!1.03e-14!9;UBERON:0010009!1.03e-14!9;UBERON:0010011!1.03e-14!9;UBERON:0000454!1.03e-14!9;UBERON:0004111!4.21e-14!241;UBERON:0000477!4.47e-14!286;UBERON:0003076!1.66e-12!15;UBERON:0003057!1.66e-12!15;UBERON:0009663!1.07e-11!7;UBERON:0001894!1.16e-11!7;UBERON:0006222!1.16e-11!7;UBERON:0000483!1.60e-10!309;UBERON:0002298!1.63e-10!8;UBERON:0000119!3.06e-10!312;UBERON:0000062!3.74e-10!511;UBERON:0000475!4.94e-10!365;UBERON:0000200!5.49e-10!6;UBERON:0001871!6.59e-10!7;UBERON:0004732!1.03e-09!13;UBERON:0000064!1.25e-09!219;UBERON:0000349!5.75e-09!5;UBERON:0004733!2.88e-08!12;UBERON:0002028!2.88e-08!12;UBERON:0007277!2.88e-08!12;UBERON:0000369!2.44e-07!4;UBERON:0002435!2.44e-07!4;UBERON:0000204!2.44e-07!4;UBERON:0010082!2.44e-07!4;UBERON:0003296!8.14e-07!4;UBERON:0010133!8.14e-07!4 | |ontology_enrichment_uberon=UBERON:0007023!1.60e-78!115;UBERON:0001049!2.27e-54!57;UBERON:0005068!2.27e-54!57;UBERON:0006241!2.27e-54!57;UBERON:0007135!2.27e-54!57;UBERON:0002616!6.75e-49!59;UBERON:0005743!3.61e-45!86;UBERON:0001017!5.19e-44!82;UBERON:0002780!5.52e-44!41;UBERON:0001890!5.52e-44!41;UBERON:0006240!5.52e-44!41;UBERON:0003075!1.01e-43!86;UBERON:0007284!1.01e-43!86;UBERON:0000955!2.61e-43!69;UBERON:0006238!2.61e-43!69;UBERON:0003080!1.14e-42!42;UBERON:0002346!1.37e-42!90;UBERON:0000073!2.92e-41!94;UBERON:0001016!2.92e-41!94;UBERON:0002020!3.66e-34!34;UBERON:0003528!3.66e-34!34;UBERON:0001893!6.55e-34!34;UBERON:0002791!1.46e-32!33;UBERON:0001869!1.01e-30!32;UBERON:0003056!1.58e-29!61;UBERON:0002619!5.94e-25!22;UBERON:0000153!1.20e-23!129;UBERON:0007811!1.20e-23!129;UBERON:0000033!1.75e-23!123;UBERON:0001950!5.52e-22!20;UBERON:0004121!6.37e-22!169;UBERON:0000924!7.62e-22!173;UBERON:0006601!7.62e-22!173;UBERON:0000956!2.53e-21!25;UBERON:0000203!2.53e-21!25;UBERON:0000025!1.62e-15!194;UBERON:0002308!5.43e-15!9;UBERON:0000125!5.43e-15!9;UBERON:0002420!1.03e-14!9;UBERON:0007245!1.03e-14!9;UBERON:0010009!1.03e-14!9;UBERON:0010011!1.03e-14!9;UBERON:0000454!1.03e-14!9;UBERON:0004111!4.21e-14!241;UBERON:0000477!4.47e-14!286;UBERON:0003076!1.66e-12!15;UBERON:0003057!1.66e-12!15;UBERON:0009663!1.07e-11!7;UBERON:0001894!1.16e-11!7;UBERON:0006222!1.16e-11!7;UBERON:0000483!1.60e-10!309;UBERON:0002298!1.63e-10!8;UBERON:0000119!3.06e-10!312;UBERON:0000062!3.74e-10!511;UBERON:0000475!4.94e-10!365;UBERON:0000200!5.49e-10!6;UBERON:0001871!6.59e-10!7;UBERON:0004732!1.03e-09!13;UBERON:0000064!1.25e-09!219;UBERON:0000349!5.75e-09!5;UBERON:0004733!2.88e-08!12;UBERON:0002028!2.88e-08!12;UBERON:0007277!2.88e-08!12;UBERON:0000369!2.44e-07!4;UBERON:0002435!2.44e-07!4;UBERON:0000204!2.44e-07!4;UBERON:0010082!2.44e-07!4;UBERON:0003296!8.14e-07!4;UBERON:0010133!8.14e-07!4 | ||
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| ||
|short_description=p1@LCNL1 | |short_description=p1@LCNL1 | ||
}} | }} |
Latest revision as of 14:48, 16 September 2015
Short description: | p1@LCNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LCNL1_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | -185bp_to_ENST00000482657_5end |
EntrezGene: | LCNL1 |
HGNC: | 34436 |
UniProt: | F2Z3E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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central nervous system pericyte | 3.62e-08 | 2 |