FFCP PHASE1:Hg19::chr4:93225110..93225155,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2895 | |EntrezGene=2895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4576 | |HGNC=4576 | ||
|TSSclassifier=strong | |||
|UniProt=O43424 | |UniProt=O43424 | ||
|association_with_transcript=-394bp_to_ENST00000282020,NM_001510,uc010ikx.2,uc011cdt.1,uc011cdu.1_5end | |association_with_transcript=-394bp_to_ENST00000282020,NM_001510,uc010ikx.2,uc011cdt.1,uc011cdu.1_5end | ||
|cluster_id=chr4:93225110..93225155,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_1_at_GRID2_5end | |description=CAGE_peak_1_at_GRID2_5end | ||
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|ontology_enrichment_celltype=CL:0000047!2.47e-08!8 | |ontology_enrichment_celltype=CL:0000047!2.47e-08!8 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.89e-17;82!UBERON:0006215;2.11e-10;3!UBERON:0006241;9.36e-10;3!UBERON:0003057;9.36e-10;3!UBERON:0010122;2.65e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;3.89e-17;82!UBERON:0006215;2.11e-10;3!UBERON:0006241;9.36e-10;3!UBERON:0003057;9.36e-10;3!UBERON:0010122;2.65e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.37e-66!82;UBERON:0005743!3.67e-64!86;UBERON:0001049!4.37e-63!57;UBERON:0005068!4.37e-63!57;UBERON:0006241!4.37e-63!57;UBERON:0007135!4.37e-63!57;UBERON:0000073!4.56e-56!94;UBERON:0001016!4.56e-56!94;UBERON:0002616!4.61e-52!59;UBERON:0000955!1.12e-51!69;UBERON:0006238!1.12e-51!69;UBERON:0003075!1.93e-47!86;UBERON:0007284!1.93e-47!86;UBERON:0002346!3.37e-46!90;UBERON:0002780!1.51e-45!41;UBERON:0001890!1.51e-45!41;UBERON:0006240!1.51e-45!41;UBERON:0007023!3.90e-45!115;UBERON:0003080!3.65e-44!42;UBERON:0002020!3.40e-42!34;UBERON:0003528!3.40e-42!34;UBERON:0001893!6.33e-42!34;UBERON:0002791!1.46e-40!33;UBERON:0001869!5.15e-39!32;UBERON:0000033!6.48e-34!123;UBERON:0004121!6.51e-34!169;UBERON:0000924!1.05e-33!173;UBERON:0006601!1.05e-33!173;UBERON:0002619!2.79e-33!22;UBERON:0003056!6.35e-33!61;UBERON:0000153!9.83e-33!129;UBERON:0007811!9.83e-33!129;UBERON:0001950!1.36e-30!20;UBERON:0000956!1.78e-28!25;UBERON:0000203!1.78e-28!25;UBERON:0003076!2.16e-19!15;UBERON:0003057!2.16e-19!15;UBERON:0000025!5.08e-18!194;UBERON:0004111!1.96e-15!241;UBERON:0002308!2.68e-15!9;UBERON:0000125!2.68e-15!9;UBERON:0002420!3.94e-15!9;UBERON:0007245!3.94e-15!9;UBERON:0010009!3.94e-15!9;UBERON:0010011!3.94e-15!9;UBERON:0000454!3.94e-15!9;UBERON:0004733!5.55e-15!12;UBERON:0002028!5.55e-15!12;UBERON:0007277!5.55e-15!12;UBERON:0000477!4.71e-14!286;UBERON:0004732!1.40e-13!13;UBERON:0000922!2.07e-13!612;UBERON:0001871!9.53e-13!7;UBERON:0009663!2.30e-12!7;UBERON:0000475!2.39e-12!365;UBERON:0000483!4.91e-12!309;UBERON:0000119!1.04e-11!312;UBERON:0002680!5.25e-11!9;UBERON:0001895!5.25e-11!9;UBERON:0010092!5.25e-11!9;UBERON:0000481!1.07e-10!347;UBERON:0000468!1.72e-10!659;UBERON:0000200!5.01e-10!6;UBERON:0002050!5.50e-10!605;UBERON:0005423!5.50e-10!605;UBERON:0002298!6.33e-10!8;UBERON:0000064!6.89e-10!219;UBERON:0000923!1.71e-09!604;UBERON:0005291!1.71e-09!604;UBERON:0006598!1.71e-09!604;UBERON:0002532!1.71e-09!604;UBERON:0000062!8.62e-09!511;UBERON:0002021!1.37e-08!5;UBERON:0000349!1.55e-08!5;UBERON:0001872!3.32e-08!5;UBERON:0000369!1.00e-07!4;UBERON:0002435!1.00e-07!4;UBERON:0000204!1.00e-07!4;UBERON:0010082!1.00e-07!4;UBERON:0000467!1.14e-07!625;UBERON:0000480!1.31e-07!626;UBERON:0002037!9.49e-07!6;UBERON:0006215!9.49e-07!6 | |ontology_enrichment_uberon=UBERON:0001017!6.37e-66!82;UBERON:0005743!3.67e-64!86;UBERON:0001049!4.37e-63!57;UBERON:0005068!4.37e-63!57;UBERON:0006241!4.37e-63!57;UBERON:0007135!4.37e-63!57;UBERON:0000073!4.56e-56!94;UBERON:0001016!4.56e-56!94;UBERON:0002616!4.61e-52!59;UBERON:0000955!1.12e-51!69;UBERON:0006238!1.12e-51!69;UBERON:0003075!1.93e-47!86;UBERON:0007284!1.93e-47!86;UBERON:0002346!3.37e-46!90;UBERON:0002780!1.51e-45!41;UBERON:0001890!1.51e-45!41;UBERON:0006240!1.51e-45!41;UBERON:0007023!3.90e-45!115;UBERON:0003080!3.65e-44!42;UBERON:0002020!3.40e-42!34;UBERON:0003528!3.40e-42!34;UBERON:0001893!6.33e-42!34;UBERON:0002791!1.46e-40!33;UBERON:0001869!5.15e-39!32;UBERON:0000033!6.48e-34!123;UBERON:0004121!6.51e-34!169;UBERON:0000924!1.05e-33!173;UBERON:0006601!1.05e-33!173;UBERON:0002619!2.79e-33!22;UBERON:0003056!6.35e-33!61;UBERON:0000153!9.83e-33!129;UBERON:0007811!9.83e-33!129;UBERON:0001950!1.36e-30!20;UBERON:0000956!1.78e-28!25;UBERON:0000203!1.78e-28!25;UBERON:0003076!2.16e-19!15;UBERON:0003057!2.16e-19!15;UBERON:0000025!5.08e-18!194;UBERON:0004111!1.96e-15!241;UBERON:0002308!2.68e-15!9;UBERON:0000125!2.68e-15!9;UBERON:0002420!3.94e-15!9;UBERON:0007245!3.94e-15!9;UBERON:0010009!3.94e-15!9;UBERON:0010011!3.94e-15!9;UBERON:0000454!3.94e-15!9;UBERON:0004733!5.55e-15!12;UBERON:0002028!5.55e-15!12;UBERON:0007277!5.55e-15!12;UBERON:0000477!4.71e-14!286;UBERON:0004732!1.40e-13!13;UBERON:0000922!2.07e-13!612;UBERON:0001871!9.53e-13!7;UBERON:0009663!2.30e-12!7;UBERON:0000475!2.39e-12!365;UBERON:0000483!4.91e-12!309;UBERON:0000119!1.04e-11!312;UBERON:0002680!5.25e-11!9;UBERON:0001895!5.25e-11!9;UBERON:0010092!5.25e-11!9;UBERON:0000481!1.07e-10!347;UBERON:0000468!1.72e-10!659;UBERON:0000200!5.01e-10!6;UBERON:0002050!5.50e-10!605;UBERON:0005423!5.50e-10!605;UBERON:0002298!6.33e-10!8;UBERON:0000064!6.89e-10!219;UBERON:0000923!1.71e-09!604;UBERON:0005291!1.71e-09!604;UBERON:0006598!1.71e-09!604;UBERON:0002532!1.71e-09!604;UBERON:0000062!8.62e-09!511;UBERON:0002021!1.37e-08!5;UBERON:0000349!1.55e-08!5;UBERON:0001872!3.32e-08!5;UBERON:0000369!1.00e-07!4;UBERON:0002435!1.00e-07!4;UBERON:0000204!1.00e-07!4;UBERON:0010082!1.00e-07!4;UBERON:0000467!1.14e-07!625;UBERON:0000480!1.31e-07!626;UBERON:0002037!9.49e-07!6;UBERON:0006215!9.49e-07!6 | ||
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|short_description=p1@GRID2 | |short_description=p1@GRID2 | ||
}} | }} |
Latest revision as of 09:27, 19 September 2015
Short description: | p1@GRID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRID2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -394bp_to_ENST00000282020, NM_001510, uc010ikx.2, uc011cdt.1, uc011cdu.1_5end |
EntrezGene: | GRID2 |
HGNC: | 4576 |
UniProt: | O43424 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data