FFCP PHASE1:Hg19::chr5:161275118..161275138,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:161275118..161275138,+
|short_description=p3@GABRA1
|description=CAGE_peak_3_at_GABRA1_5end
|association_with_transcript=178bp_to_ENST00000393943,NM_001127...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2554 | |EntrezGene=2554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4075 | |HGNC=4075 | ||
|TSSclassifier=strong | |||
|UniProt=P14867 | |UniProt=P14867 | ||
|association_with_transcript=178bp_to_ENST00000393943,NM_001127644,uc010jiy.2_5end | |||
|cluster_id=chr5:161275118..161275138,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_GABRA1_5end | |||
|id=chr5:161275118..161275138,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.14e-20;82!UBERON:0006215;3.98e-12;3!UBERON:0010122;2.42e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@GABRA1 | |||
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Latest revision as of 17:20, 16 September 2015
Short description: | p3@GABRA1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GABRA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 178bp_to_ENST00000393943, NM_001127644, uc010jiy.2_5end |
EntrezGene: | GABRA1 |
HGNC: | 4075 |
UniProt: | P14867 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data