FFCP PHASE1:Hg19::chr7:20371123..20371138,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:20371123..20371138,+
|short_description=p17@ITGB8
|description=CAGE_peak_17_at_ITGB8_5end
|association_with_transcript=377bp_to_ENST00000222573_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3696 | |EntrezGene=3696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6163 | |HGNC=6163 | ||
|TSSclassifier=strong | |||
|UniProt=P26012 | |UniProt=P26012 | ||
|association_with_transcript=377bp_to_ENST00000222573_5end | |||
|cluster_id=chr7:20371123..20371138,+ | |||
|coexpression_cluster_id=C4673 | |||
|description=CAGE_peak_17_at_ITGB8_5end | |||
|id=chr7:20371123..20371138,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.15e-12;3!CL:0000128;7.84e-09;7!CL:0000126;7.84e-09;7!CL:0000127;7.84e-09;7!CL:0000047;1.41e-08;2!CL:0002319;2.16e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.18e-12,3;CL:0000128,8.20e-09,7;CL:0000126,8.20e-09,7;CL:0000127,8.20e-09,7;CL:0002453,8.20e-09,7;CL:0002319,2.20e-07,25;CL:0000047,2.63e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.54e-16;82!UBERON:0006241;1.40e-11;3!UBERON:0003057;1.40e-11;3!UBERON:0010122;1.06e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.88e-56;34!UBERON:0003528;4.16e-54;34!UBERON:0002020;4.16e-54;34!UBERON:0002791;1.24e-53;32!UBERON:0001869;2.65e-52;32!UBERON:0002780;1.12e-47;41!UBERON:0001890;1.12e-47;41!UBERON:0000073;3.14e-47;53!UBERON:0002616;3.14e-47;53!UBERON:0000956;3.31e-39;25!UBERON:0000203;3.31e-39;25!UBERON:0001017;5.64e-33;75!UBERON:0002619;3.68e-30;22!UBERON:0000125;1.21e-29;9!UBERON:0002308;1.21e-29;9!UBERON:0001950;9.04e-29;20!UBERON:0001016;1.31e-28;83!UBERON:0000955;9.79e-28;68!UBERON:0009663;2.67e-23;7!UBERON:0002420;3.13e-23;9!UBERON:0007245;3.13e-23;9!UBERON:0010009;3.13e-23;9!UBERON:0010011;3.13e-23;9!UBERON:0000454;3.13e-23;9!UBERON:0002298;9.48e-21;6!UBERON:0000200;1.02e-19;6!UBERON:0004732;2.61e-16;13!UBERON:0000369;1.00e-13;4!UBERON:0002435;1.00e-13;4!UBERON:0000204;1.00e-13;4!UBERON:0004733;1.96e-13;12!UBERON:0002028;1.96e-13;12!UBERON:0007023;2.06e-13;114!UBERON:0002240;1.40e-11;3!UBERON:0005174;1.40e-11;3!UBERON:0001137;1.40e-11;3!UBERON:0002021;1.51e-11;5!UBERON:0001896;2.03e-11;3!UBERON:0005290;2.03e-11;3!UBERON:0000988;4.57e-11;3!UBERON:0001870;4.57e-11;3!UBERON:0005383;1.01e-10;3!UBERON:0005382;1.01e-10;3!UBERON:0011216;2.87e-10;132!UBERON:0005162;7.21e-09;2!UBERON:0000122;7.21e-09;2!UBERON:0001897;8.06e-09;2!UBERON:0010225;8.06e-09;2!UBERON:0002148;4.73e-08;2!UBERON:0006331;4.73e-08;2!UBERON:0009662;4.73e-08;2!UBERON:0002771;1.06e-07;2!UBERON:0001873;1.06e-07;2!UBERON:0002702;1.06e-07;2!UBERON:0001875;1.06e-07;2!UBERON:0006514;1.06e-07;2!UBERON:0010314;7.52e-07;132!UBERON:0000349;8.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.15e-90,56;UBERON:0005068,1.15e-90,56;UBERON:0006241,1.15e-90,56;UBERON:0007135,1.15e-90,56;UBERON:0001017,1.28e-84,81;UBERON:0000073,2.56e-81,53;UBERON:0002616,2.56e-81,53;UBERON:0001016,4.01e-79,89;UBERON:0003075,8.02e-70,82;UBERON:0007284,8.02e-70,82;UBERON:0002780,2.30e-68,41;UBERON:0001890,2.30e-68,41;UBERON:0003080,2.30e-68,41;UBERON:0006240,2.30e-68,41;UBERON:0000955,3.73e-68,68;UBERON:0006238,3.73e-68,68;UBERON:0001893,3.49e-66,34;UBERON:0002346,3.86e-66,86;UBERON:0003528,3.89e-66,34;UBERON:0002020,3.89e-66,34;UBERON:0002791,8.53e-60,32;UBERON:0001869,2.09e-59,32;UBERON:0010371,5.31e-56,104;UBERON:0003056,2.57e-54,61;UBERON:0004121,9.80e-43,171;UBERON:0000924,9.80e-43,171;UBERON:0006601,9.80e-43,171;UBERON:0010314,8.51e-42,132;UBERON:0000956,4.30e-39,25;UBERON:0000203,4.30e-39,25;UBERON:0007023,3.01e-38,114;UBERON:0000125,3.13e-30,9;UBERON:0002308,3.13e-30,9;UBERON:0002619,4.68e-30,22;UBERON:0001950,1.13e-28,20;UBERON:0011216,6.07e-27,223;UBERON:0002420,1.14e-23,9;UBERON:0007245,1.14e-23,9;UBERON:0010009,1.14e-23,9;UBERON:0010011,1.14e-23,9;UBERON:0000454,1.14e-23,9;UBERON:0009663,1.16e-23,7;UBERON:0003076,3.29e-22,15;UBERON:0003057,3.29e-22,15;UBERON:0002298,1.71e-21,6;UBERON:0000200,4.56e-20,6;UBERON:0000025,6.64e-20,192;UBERON:0004732,8.09e-17,13;UBERON:0004111,4.83e-14,240;UBERON:0004733,6.55e-14,12;UBERON:0002028,6.55e-14,12;UBERON:0007277,6.55e-14,12;UBERON:0000369,1.24e-13,4;UBERON:0002435,1.24e-13,4;UBERON:0000204,1.24e-13,4;UBERON:0010082,1.24e-13,4;UBERON:0000483,2.38e-12,306;UBERON:0000119,3.93e-12,309;UBERON:0001896,1.04e-11,3;UBERON:0005290,1.04e-11,3;UBERON:0010096,1.04e-11,3;UBERON:0002021,1.44e-11,5;UBERON:0000988,1.60e-11,3;UBERON:0002240,1.71e-11,3;UBERON:0005174,1.71e-11,3;UBERON:0001137,1.71e-11,3;UBERON:0001870,3.36e-11,3;UBERON:0005383,8.87e-11,3;UBERON:0005382,8.87e-11,3;UBERON:0005162,6.59e-09,2;UBERON:0000122,6.59e-09,2;UBERON:0001897,7.95e-09,2;UBERON:0010225,7.95e-09,2;UBERON:0002148,2.78e-08,2;UBERON:0006331,2.78e-08,2;UBERON:0009662,2.78e-08,2;UBERON:0001875,3.70e-08,2;UBERON:0006514,3.70e-08,2;UBERON:0002702,6.31e-08,2;UBERON:0001873,8.64e-08,2;UBERON:0010122,8.64e-08,2;UBERON:0002771,1.06e-07,2;UBERON:0000923,5.81e-07,560;UBERON:0010316,5.81e-07,560;UBERON:0005291,5.81e-07,560;UBERON:0006598,5.81e-07,560;UBERON:0010317,5.81e-07,560;UBERON:0002532,5.81e-07,560;UBERON:0002050,7.88e-07,564;UBERON:0000349,8.77e-07,5 | |||
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| ||
|short_description=p17@ITGB8 | |||
}} | }} |
Latest revision as of 16:46, 17 September 2015
Short description: | p17@ITGB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_ITGB8_5end |
Coexpression cluster: | C4673_retina_substantia_optic_Astrocyte_melanoma_Neural_thalamus |
Association with transcript: | 377bp_to_ENST00000222573_5end |
EntrezGene: | ITGB8 |
HGNC: | 6163 |
UniProt: | P26012 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.18e-12 | 3 |
oligodendrocyte | 8.20e-09 | 7 |
macroglial cell | 8.20e-09 | 7 |
astrocyte | 8.20e-09 | 7 |
oligodendrocyte precursor cell | 8.20e-09 | 7 |
neural cell | 2.20e-07 | 25 |
neuronal stem cell | 2.63e-07 | 8 |