FFCP PHASE1:Hg19::chr4:57547820..57547829,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84525 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24961 | |||
|TSSclassifier=strong | |||
|UniProt=B7WNL2 | |||
|association_with_transcript=40bp_to_ENST00000509435_5end | |||
|cluster_id=chr4:57547820..57547829,- | |||
|coexpression_cluster_id=C1942 | |||
|description=CAGE_peak_8_at_HOPX_5end | |||
|id=chr4:57547820..57547829,- | |||
|ontology_enrichment_celltype=CL:0002605!2.90e-09!3;CL:0000047!7.42e-09!8;CL:0002623!1.07e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;5.67e-14;3!CL:0000047;2.79e-10;2!CL:0002319;2.90e-09;25!CL:0000540;4.41e-07;6!CL:0000404;4.41e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,5.80e-14,3;CL:0000047,7.16e-14,8;CL:0002319,2.75e-09,25;CL:0000540,4.01e-07,6;CL:0000031,4.01e-07,6;CL:0000404,4.01e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.55e-14;3!UBERON:0003057;5.55e-14;3!UBERON:0006601;5.35e-13;82!CL:0000031;4.41e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.30e-90!82;UBERON:0005743!2.30e-88!86;UBERON:0001049!4.18e-85!57;UBERON:0005068!4.18e-85!57;UBERON:0006241!4.18e-85!57;UBERON:0007135!4.18e-85!57;UBERON:0000073!9.68e-79!94;UBERON:0001016!9.68e-79!94;UBERON:0002616!2.31e-73!59;UBERON:0000955!3.08e-70!69;UBERON:0006238!3.08e-70!69;UBERON:0001893!3.68e-69!34;UBERON:0002020!4.35e-69!34;UBERON:0003528!4.35e-69!34;UBERON:0002780!1.13e-67!41;UBERON:0001890!1.13e-67!41;UBERON:0006240!1.13e-67!41;UBERON:0002791!1.16e-66!33;UBERON:0003080!7.38e-66!42;UBERON:0001869!7.28e-65!32;UBERON:0003075!3.22e-60!86;UBERON:0007284!3.22e-60!86;UBERON:0002346!5.69e-57!90;UBERON:0000956!2.95e-53!25;UBERON:0000203!2.95e-53!25;UBERON:0007023!1.25e-47!115;UBERON:0002619!1.26e-45!22;UBERON:0000033!3.44e-45!123;UBERON:0003056!4.24e-45!61;UBERON:0000153!2.61e-44!129;UBERON:0007811!2.61e-44!129;UBERON:0004121!3.01e-44!169;UBERON:0000924!6.98e-43!173;UBERON:0006601!6.98e-43!173;UBERON:0001950!5.80e-41!20;UBERON:0000025!1.99e-20!194;UBERON:0003076!2.14e-19!15;UBERON:0003057!2.14e-19!15;UBERON:0000477!1.84e-17!286;UBERON:0004111!1.97e-17!241;UBERON:0002420!4.82e-17!9;UBERON:0007245!4.82e-17!9;UBERON:0010009!4.82e-17!9;UBERON:0010011!4.82e-17!9;UBERON:0000454!4.82e-17!9;UBERON:0002308!6.70e-17!9;UBERON:0000125!6.70e-17!9;UBERON:0000200!1.15e-15!6;UBERON:0001871!1.87e-15!7;UBERON:0002298!3.87e-15!8;UBERON:0000483!1.41e-13!309;UBERON:0000119!2.59e-13!312;UBERON:0000349!3.04e-13!5;UBERON:0001872!4.03e-13!5;UBERON:0004733!9.98e-13!12;UBERON:0002028!9.98e-13!12;UBERON:0007277!9.98e-13!12;UBERON:0009663!1.67e-12!7;UBERON:0000064!6.14e-12!219;UBERON:0004732!1.24e-11!13;UBERON:0000475!2.50e-11!365;UBERON:0000062!2.03e-09!511;UBERON:0002240!2.75e-09!3;UBERON:0001896!7.57e-09!3;UBERON:0005290!7.57e-09!3;UBERON:0010096!7.57e-09!3;UBERON:0002021!8.33e-09!5;UBERON:0002771!8.40e-09!3;UBERON:0000922!1.54e-08!612;UBERON:0000988!2.30e-08!3;UBERON:0006331!3.91e-08!3;UBERON:0000481!6.99e-08!347;UBERON:0000923!1.04e-07!604;UBERON:0005291!1.04e-07!604;UBERON:0006598!1.04e-07!604;UBERON:0002532!1.04e-07!604;UBERON:0002050!1.14e-07!605;UBERON:0005423!1.14e-07!605;UBERON:0000467!1.96e-07!625;UBERON:0000480!2.15e-07!626;UBERON:0002680!6.86e-07!9;UBERON:0001895!6.86e-07!9;UBERON:0010092!6.86e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.21e-49;34!UBERON:0002020;1.21e-49;34!UBERON:0001869;2.31e-49;32!UBERON:0001893;3.49e-49;34!UBERON:0000956;4.43e-49;25!UBERON:0000203;4.43e-49;25!UBERON:0002791;3.11e-46;32!UBERON:0000073;4.42e-40;53!UBERON:0002616;4.42e-40;53!UBERON:0002619;3.48e-38;22!UBERON:0002780;5.35e-38;41!UBERON:0001890;5.35e-38;41!UBERON:0001950;1.93e-36;20!UBERON:0001017;1.54e-30;75!UBERON:0000955;1.12e-25;68!UBERON:0002298;5.71e-24;6!UBERON:0001016;1.10e-23;83!UBERON:0004733;1.12e-15;12!UBERON:0002028;1.12e-15;12!UBERON:0004732;2.11e-14;13!UBERON:0002240;5.55e-14;3!UBERON:0005174;5.55e-14;3!UBERON:0001137;5.55e-14;3!UBERON:0001872;1.41e-13;5!UBERON:0002021;1.48e-13;5!UBERON:0001896;3.56e-13;3!UBERON:0005290;3.56e-13;3!UBERON:0000988;1.49e-12;3!UBERON:0000200;9.41e-12;6!UBERON:0000125;3.76e-11;9!UBERON:0002308;3.76e-11;9!UBERON:0007023;1.18e-10;114!UBERON:0011216;3.99e-10;132!UBERON:0000369;7.49e-10;4!UBERON:0002435;7.49e-10;4!UBERON:0000204;7.49e-10;4!UBERON:0002148;5.34e-09;2!UBERON:0006331;5.34e-09;2!UBERON:0009662;5.34e-09;2!UBERON:0000349;2.14e-08;5!UBERON:0002420;1.22e-07;9!UBERON:0007245;1.22e-07;9!UBERON:0010009;1.22e-07;9!UBERON:0010011;1.22e-07;9!UBERON:0000454;1.22e-07;9!UBERON:0002680;3.20e-07;9!UBERON:0001895;3.20e-07;9!UBERON:0001870;7.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.28e-86,81;UBERON:0001049,9.56e-78,56;UBERON:0005068,9.56e-78,56;UBERON:0006241,9.56e-78,56;UBERON:0007135,9.56e-78,56;UBERON:0001016,2.70e-77,89;UBERON:0000073,2.41e-67,53;UBERON:0002616,2.41e-67,53;UBERON:0000955,5.67e-62,68;UBERON:0006238,5.67e-62,68;UBERON:0001893,1.98e-58,34;UBERON:0003528,2.41e-58,34;UBERON:0002020,2.41e-58,34;UBERON:0001869,4.70e-57,32;UBERON:0002780,3.83e-52,41;UBERON:0001890,3.83e-52,41;UBERON:0003080,3.83e-52,41;UBERON:0006240,3.83e-52,41;UBERON:0002791,9.64e-52,32;UBERON:0003075,5.89e-51,82;UBERON:0007284,5.89e-51,82;UBERON:0000956,4.92e-49,25;UBERON:0000203,4.92e-49,25;UBERON:0002346,2.96e-48,86;UBERON:0010371,1.20e-38,104;UBERON:0002619,3.79e-38,22;UBERON:0004121,1.01e-36,171;UBERON:0000924,1.01e-36,171;UBERON:0006601,1.01e-36,171;UBERON:0001950,2.19e-36,20;UBERON:0003056,2.00e-33,61;UBERON:0010314,5.59e-33,132;UBERON:0007023,2.59e-30,114;UBERON:0011216,3.16e-29,223;UBERON:0003076,5.77e-26,15;UBERON:0003057,5.77e-26,15;UBERON:0002298,4.75e-24,6;UBERON:0000025,1.76e-17,192;UBERON:0004733,9.18e-16,12;UBERON:0002028,9.18e-16,12;UBERON:0007277,9.18e-16,12;UBERON:0004732,1.76e-14,13;UBERON:0002240,5.32e-14,3;UBERON:0005174,5.32e-14,3;UBERON:0001137,5.32e-14,3;UBERON:0001872,1.56e-13,5;UBERON:0002021,1.84e-13,5;UBERON:0001896,2.71e-13,3;UBERON:0005290,2.71e-13,3;UBERON:0010096,2.71e-13,3;UBERON:0000988,1.62e-12,3;UBERON:0004111,1.80e-12,240;UBERON:0000200,9.42e-12,6;UBERON:0000125,3.89e-11,9;UBERON:0002308,3.89e-11,9;UBERON:0000369,7.61e-10,4;UBERON:0002435,7.61e-10,4;UBERON:0000204,7.61e-10,4;UBERON:0010082,7.61e-10,4;UBERON:0002148,5.57e-09,2;UBERON:0006331,5.57e-09,2;UBERON:0009662,5.57e-09,2;UBERON:0000483,5.92e-09,306;UBERON:0000119,8.57e-09,309;UBERON:0000349,2.37e-08,5;UBERON:0002420,1.27e-07,9;UBERON:0007245,1.27e-07,9;UBERON:0010009,1.27e-07,9;UBERON:0010011,1.27e-07,9;UBERON:0000454,1.27e-07,9;UBERON:0002680,3.09e-07,9;UBERON:0001895,3.09e-07,9;UBERON:0010092,3.09e-07,9;UBERON:0001870,7.11e-07,3;UBERON:0000923,7.89e-07,560;UBERON:0010316,7.89e-07,560;UBERON:0005291,7.89e-07,560;UBERON:0006598,7.89e-07,560;UBERON:0010317,7.89e-07,560;UBERON:0002532,7.89e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.304495536718,2.46373965131192,6.65375989852455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.14740647200868,10.4111883086097,3.86644406388848,15.0764638800914,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,4.22008249231538,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,3.87733098438087,5.38054969338737,7.98455192004777,0,0,0,0,0.254253650292766,0,0,0,0,0,3.97968247463846,0,1.87984741883082,0.886642856860642,4.38770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14581926067151,0,2.10838001152805,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,1.35588444468319,0,0,3.8619585533086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,4.494712401682,0,0,0,0,0,4.37396807937778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,2.24795422962573,0,0,0.640724475406168,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,5.25801908967299,2.29363678276028,2.66229723688445,3.41530216177609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31820246764154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0553352030867,0,3.35231104020018,2.05116364240755,2.01657356977374,2.62797559364028,1.61475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,3.10672889244615,0.781078098613847,3.10030194751776,3.04395888930753,1.64092442705466,0,0,0,0,0,0.672567444437648,0,0,0.0887023701626388,0,0,1.2914249265598,2.56513816895111,0,0,0,1.25692471932802,0,0,0,0,0.428859265059938,0,0,0,0,0.207216164163037,0.85359238546975,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55201007249429,5.04978880556046,23.6687207446704,0,0,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,2.65166811744567,3.05445483238264,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0.930896962757057,0,0.23806443146374,0,0,0,3.24600507218641,0.606351566874658,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@HOPX | |||
}} |
Latest revision as of 03:02, 18 September 2015
Short description: | p8@HOPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HOPX_5end |
Coexpression cluster: | C1942_Neural_spinal_Astrocyte_Neurons_caudate_locus_medial |
Association with transcript: | 40bp_to_ENST00000509435_5end |
EntrezGene: | HOPX |
HGNC: | 24961 |
UniProt: | B7WNL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 5.80e-14 | 3 |
neuronal stem cell | 7.16e-14 | 8 |
neural cell | 2.75e-09 | 25 |
neuron | 4.01e-07 | 6 |
neuroblast | 4.01e-07 | 6 |
electrically signaling cell | 4.01e-07 | 6 |