FFCP PHASE1:Hg19::chr9:91793987..91794052,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18181 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T7I8,Q92529 | |||
|association_with_transcript=-305bp_to_ENST00000375830,ENST00000375835,NM_016848,uc004aqg.2_5end | |||
|cluster_id=chr9:91793987..91794052,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SHC3_5end | |||
|id=chr9:91793987..91794052,- | |||
|ontology_enrichment_celltype=CL:0000047!1.93e-11!8;CL:0000540!1.39e-08!6;CL:0000031!1.39e-08!6;CL:0000404!1.39e-08!6;CL:0002319!7.60e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.19e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.87e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.38e-16;82!UBERON:0010122;3.31e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;2.50e-66;22!UBERON:0001869;6.64e-65;32!UBERON:0003528;2.05e-63;34!UBERON:0002020;2.05e-63;34!UBERON:0001893;2.85e-63;34!UBERON:0002791;1.73e-60;32!UBERON:0001950;3.11e-60;20!UBERON:0000956;6.06e-58;25!UBERON:0000203;6.06e-58;25!UBERON:0002780;8.09e-55;41!UBERON:0001890;8.09e-55;41!UBERON:0000073;1.80e-48;53!UBERON:0002616;1.80e-48;53!UBERON:0000955;3.19e-36;68!UBERON:0001017;9.54e-36;75!UBERON:0001016;5.09e-28;83!UBERON:0000200;2.03e-20;6!UBERON:0002298;1.29e-17;6!UBERON:0001872;1.78e-17;5!UBERON:0001871;4.16e-17;6!UBERON:0000349;8.02e-17;5!UBERON:0002420;9.21e-17;9!UBERON:0007245;9.21e-17;9!UBERON:0010009;9.21e-17;9!UBERON:0010011;9.21e-17;9!UBERON:0000454;9.21e-17;9!UBERON:0002021;1.60e-16;5!UBERON:0000125;3.08e-16;9!UBERON:0002308;3.08e-16;9!UBERON:0000369;3.16e-13;4!UBERON:0002435;3.16e-13;4!UBERON:0000204;3.16e-13;4!UBERON:0007023;4.19e-13;114!UBERON:0011216;1.44e-11;132!UBERON:0004733;2.22e-11;12!UBERON:0002028;2.22e-11;12!UBERON:0009663;3.35e-11;7!UBERON:0001870;5.41e-11;3!UBERON:0004732;1.99e-10;13!UBERON:0005383;3.92e-10;3!UBERON:0005382;3.92e-10;3!UBERON:0000988;7.10e-10;3!UBERON:0001896;1.89e-09;3!UBERON:0005290;1.89e-09;3!UBERON:0002771;5.18e-08;2!UBERON:0001876;9.27e-08;2!UBERON:0002702;9.27e-08;2!UBERON:0001954;1.19e-07;2!UBERON:0003022;1.19e-07;2!UBERON:0002421;1.19e-07;2!UBERON:0002600;1.19e-07;2!UBERON:0010314;3.23e-07;132!UBERON:0001873;3.31e-07;2!UBERON:0002148;4.67e-07;2!UBERON:0006331;4.67e-07;2!UBERON:0009662;4.67e-07;2!UBERON:0002784;4.92e-07;4!UBERON:0001894;7.13e-07;7!UBERON:0001897;9.61e-07;2!UBERON:0010225;9.61e-07;2 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.572471974262113,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6497571801688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0,0.621966330092223,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0.542621605391443,1.64648067356154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4506365869007,22.1237751557957,7.73288812777695,11.056073512067,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,1.27463817604702,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0.286822704408103,0.294747123039363,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,31.8127247285215,14.3482804738723,0,0,0,0.19924798825107,0,0,0,0.984678443688556,0,0,0,0,0.394573622547734,0,0,21.3253204140948,18.2753153378847,7.98455192004777,0,0,0,0,0,0,0.344743373241465,0,0,3.54296554325536,8.07996138790233,0,0.221158519862449,2.95547618953547,21.0609981267814,0,0,2.30850775511391,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,4.17887024480198,0,4.91955336023212,0,0,2.67058417487502,0.394584402849391,0,5.20323694771833,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,1.89184635718778,0,0.0730893170861856,0,0,0,0,0,0,34.947559367645,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,2.40168115483916,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,19.8807422452326,18.6598666372859,0.482259445395058,0.275078873194468,0.415440338029185,1.349843349309,0,38.1507215812395,0,0.0788057072991982,0.104909176269996,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42988416718512,2.24795422962573,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,19.4934999592737,34.2893804374516,22.4091765964635,2.86704597845036,1.10929051536852,3.47739856471747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,23.089158837339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83302179374359,0,0.54604819096007,0,0,0,0,0,0,0,0,0,23.8290425107865,18.420554922326,11.8129055702292,20.101403695594,10.0828678488687,24.75829638219,30.5188970244199,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,32.4855782014478,39.8349830293062,32.0364534576835,34.7518639862609,16.9562190795648,0,1.48863353516788,0,0,1.07140367175657,0.672567444437648,0,0,0,0,0,6.66103383172951,32.689068460736,0,0,0.078493092850514,13.5119407327762,0,0,0,0,0.285906176706625,0,0,0,0.801711364730253,0,0,0,0.860454717640555,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0.471353094203252,4.3187862765288,0.594092800654172,2.9585900930838,0,0,0,0,0,0,0,0,0.917458566809082,0.573358332605805,0,37.8032685461486,3.49080552272302,0,0,0,0,0.126166424835079,0.109265571963696,0,1.63182127587171,0.801652215796681,0.643264296743914,1.75495277504663,0,0,1.65833887891756,2.1720929130998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p3@SHC3 | |||
}} |
Latest revision as of 04:33, 18 September 2015
Short description: | p3@SHC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SHC3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -305bp_to_ENST00000375830, ENST00000375835, NM_016848, uc004aqg.2_5end |
EntrezGene: | SHC3 |
HGNC: | 18181 |
UniProt: | Q5T7I8Q92529 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.87e-10 | 8 |