FFCP PHASE1:Hg19::chr10:95517685..95517743,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:95517685..95517743,+ to FFCP PHASE1:Hg19::chr10:95517685..95517743,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9211 | |EntrezGene=9211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6572 | |HGNC=6572 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc001kje.2,uc009xui.2_5end | |||
|cluster_id=chr10:95517685..95517743,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_LGI1_5end | |||
|id=chr10:95517685..95517743,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.17e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.30e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.05e-18;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.14e-50!115;UBERON:0005743!4.79e-50!86;UBERON:0000073!6.33e-50!94;UBERON:0001016!6.33e-50!94;UBERON:0001017!7.57e-49!82;UBERON:0001049!1.71e-48!57;UBERON:0005068!1.71e-48!57;UBERON:0006241!1.71e-48!57;UBERON:0007135!1.71e-48!57;UBERON:0002616!3.49e-45!59;UBERON:0000955!1.05e-43!69;UBERON:0006238!1.05e-43!69;UBERON:0002780!5.80e-41!41;UBERON:0001890!5.80e-41!41;UBERON:0006240!5.80e-41!41;UBERON:0003075!1.36e-40!86;UBERON:0007284!1.36e-40!86;UBERON:0003080!1.37e-39!42;UBERON:0002346!1.17e-37!90;UBERON:0001893!4.17e-34!34;UBERON:0002020!5.34e-34!34;UBERON:0003528!5.34e-34!34;UBERON:0002791!4.99e-33!33;UBERON:0001869!3.39e-32!32;UBERON:0000153!2.93e-31!129;UBERON:0007811!2.93e-31!129;UBERON:0003056!2.97e-31!61;UBERON:0000033!1.02e-30!123;UBERON:0004121!1.16e-30!169;UBERON:0000924!3.21e-29!173;UBERON:0006601!3.21e-29!173;UBERON:0002619!1.69e-25!22;UBERON:0000956!1.48e-24!25;UBERON:0000203!1.48e-24!25;UBERON:0001950!3.14e-23!20;UBERON:0002420!3.84e-11!9;UBERON:0007245!3.84e-11!9;UBERON:0010009!3.84e-11!9;UBERON:0010011!3.84e-11!9;UBERON:0000454!3.84e-11!9;UBERON:0002308!7.74e-11!9;UBERON:0000125!7.74e-11!9;UBERON:0003076!4.61e-10!15;UBERON:0003057!4.61e-10!15;UBERON:0001871!8.71e-10!7;UBERON:0000064!1.55e-09!219;UBERON:0000025!3.24e-09!194;UBERON:0009663!5.78e-09!7;UBERON:0000481!6.08e-09!347;UBERON:0000062!6.42e-09!511;UBERON:0000477!2.29e-08!286;UBERON:0000475!2.32e-08!365;UBERON:0000922!2.77e-08!612;UBERON:0004732!3.28e-08!13;UBERON:0000200!3.63e-08!6;UBERON:0001894!3.68e-08!7;UBERON:0006222!3.68e-08!7;UBERON:0004111!7.51e-08!241;UBERON:0004733!1.96e-07!12;UBERON:0002028!1.96e-07!12;UBERON:0007277!1.96e-07!12;UBERON:0002298!2.58e-07!8;UBERON:0000468!3.71e-07!659;UBERON:0000349!3.71e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.93e-40;41!UBERON:0001890;4.93e-40;41!UBERON:0001893;1.17e-38;34!UBERON:0003528;1.55e-38;34!UBERON:0002020;1.55e-38;34!UBERON:0001869;1.74e-38;32!UBERON:0002791;2.29e-38;32!UBERON:0002619;6.23e-37;22!UBERON:0000073;1.14e-36;53!UBERON:0002616;1.14e-36;53!UBERON:0001950;1.45e-33;20!UBERON:0000956;1.03e-31;25!UBERON:0000203;1.03e-31;25!UBERON:0001017;7.26e-29;75!UBERON:0000955;4.50e-26;68!UBERON:0001016;3.19e-24;83!UBERON:0002420;1.08e-15;9!UBERON:0007245;1.08e-15;9!UBERON:0010009;1.08e-15;9!UBERON:0010011;1.08e-15;9!UBERON:0000454;1.08e-15;9!UBERON:0000125;3.05e-15;9!UBERON:0002308;3.05e-15;9!UBERON:0007023;2.17e-14;114!UBERON:0011216;4.12e-13;132!UBERON:0009663;1.76e-12;7!UBERON:0004732;4.58e-12;13!UBERON:0001871;4.78e-12;6!UBERON:0000200;2.60e-11;6!UBERON:0001894;2.85e-11;7!UBERON:0004733;6.69e-11;12!UBERON:0002028;6.69e-11;12!UBERON:0000922;8.13e-11;49!UBERON:0002298;1.06e-10;6!UBERON:0000349;7.87e-10;5!UBERON:0002021;3.91e-09;5!UBERON:0001872;4.93e-09;5!UBERON:0000369;2.10e-08;4!UBERON:0002435;2.10e-08;4!UBERON:0000204;2.10e-08;4!UBERON:0010314;3.29e-07;132!UBERON:0002784;5.50e-07;4!UBERON:0002680;8.10e-07;9!UBERON:0001895;8.10e-07;9!UBERON:0003296;8.73e-07;4!UBERON:0010133;8.73e-07;4!UBERON:0005383;9.27e-07;3!UBERON:0005382;9.27e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.53e-70,56;UBERON:0005068,6.53e-70,56;UBERON:0006241,6.53e-70,56;UBERON:0007135,6.53e-70,56;UBERON:0000073,1.76e-65,53;UBERON:0002616,1.76e-65,53;UBERON:0001017,8.06e-64,81;UBERON:0001016,1.85e-61,89;UBERON:0000955,5.27e-61,68;UBERON:0006238,5.27e-61,68;UBERON:0002780,7.51e-56,41;UBERON:0001890,7.51e-56,41;UBERON:0003080,7.51e-56,41;UBERON:0006240,7.51e-56,41;UBERON:0003075,2.39e-54,82;UBERON:0007284,2.39e-54,82;UBERON:0007023,4.25e-54,114;UBERON:0002346,6.04e-51,86;UBERON:0001893,9.94e-46,34;UBERON:0003528,1.41e-45,34;UBERON:0002020,1.41e-45,34;UBERON:0001869,6.57e-43,32;UBERON:0002791,1.07e-42,32;UBERON:0010371,2.35e-40,104;UBERON:0003056,2.59e-39,61;UBERON:0002619,6.07e-37,22;UBERON:0010314,2.31e-35,132;UBERON:0001950,1.40e-33,20;UBERON:0011216,2.57e-33,223;UBERON:0004121,1.97e-32,171;UBERON:0000924,1.97e-32,171;UBERON:0006601,1.97e-32,171;UBERON:0000956,1.01e-31,25;UBERON:0000203,1.01e-31,25;UBERON:0000025,7.04e-17,192;UBERON:0002420,1.07e-15,9;UBERON:0007245,1.07e-15,9;UBERON:0010009,1.07e-15,9;UBERON:0010011,1.07e-15,9;UBERON:0000454,1.07e-15,9;UBERON:0000125,3.01e-15,9;UBERON:0002308,3.01e-15,9;UBERON:0003076,8.02e-15,15;UBERON:0003057,8.02e-15,15;UBERON:0004111,5.42e-13,240;UBERON:0009663,1.74e-12,7;UBERON:0001871,4.64e-12,6;UBERON:0004732,4.64e-12,13;UBERON:0000200,2.61e-11,6;UBERON:0001894,2.66e-11,7;UBERON:0006222,2.66e-11,7;UBERON:0004733,6.62e-11,12;UBERON:0002028,6.62e-11,12;UBERON:0007277,6.62e-11,12;UBERON:0002298,1.04e-10,6;UBERON:0000349,7.96e-10,5;UBERON:0000922,8.01e-10,592;UBERON:0000483,8.80e-10,306;UBERON:0000119,1.65e-09,309;UBERON:0002021,3.98e-09,5;UBERON:0001872,4.86e-09,5;UBERON:0000369,2.08e-08,4;UBERON:0002435,2.08e-08,4;UBERON:0000204,2.08e-08,4;UBERON:0010082,2.08e-08,4;UBERON:0000923,1.57e-07,560;UBERON:0010316,1.57e-07,560;UBERON:0005291,1.57e-07,560;UBERON:0006598,1.57e-07,560;UBERON:0010317,1.57e-07,560;UBERON:0002532,1.57e-07,560;UBERON:0002050,2.71e-07,564;UBERON:0005423,3.66e-07,581;UBERON:0002784,5.21e-07,4;UBERON:0002680,8.11e-07,9;UBERON:0001895,8.11e-07,9;UBERON:0010092,8.11e-07,9;UBERON:0003296,8.22e-07,4;UBERON:0010133,8.22e-07,4;UBERON:0005383,9.20e-07,3;UBERON:0005382,9.20e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.8564952944007,2.31978163009541,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,3.11964896641424,0.665188192387692,0.175669571386252,6.48346423713678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,1.12135520028461,0,0,0,0,0,0.302714855289863,1.72852777344,0.70296429550139,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.184099797284599,1.45481451136931,0,0,0,0,0,0,4.02513230227665,3.04818467139416,4.4153698290417,10.7807497215985,4.79409616663694,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09827098133912,0,0.773288812777695,1.84267891867784,0,0,0,0,3.55805325985506,1.00034104211935,0.813795071099207,0.207970861530807,2.3195768543631,0.788512075169673,0.117141414992713,3.00946099727719,2.27407504055985,1.03473071292505,0.664225598535437,0,0,0,0.343143423810856,0,0,0,0,3.32870879020994,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0.325378394664303,0.515205058238611,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74569137078089,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,1.89996871767898,0.987884678879706,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,51.1687300700596,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,2.54857095673978,0,0,0,35.0418323382514,0,66.607892400342,48.2496098288059,0,0,0,2.78947183551498,1.65770349318689,0,55.7364319636744,0,0,0,0,0,0.690503839458535,0,0,37.8039770977135,53.8982650320356,25.9497937401552,0.520855522170466,0,0,0,0,0,0.344743373241465,0,0,84.1454316523147,68.6193735778571,61.0326945268333,52.7463069871941,27.4859285626799,36.1985905304055,0,0,0.538651809526579,0,0,0,0,0,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,4.0690479671536,4.27721101453538,0,0,0,23.4555942772756,1.60515529459758,56.4577314198067,0,0,0,2.36750641709634,3.62972148145992,18.0582929361989,2.0851571277401,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,2.90967049465258,0,11.2990370390266,0,0,63.5640391397022,0,0,1.28071796843612,0,0,3.89424426964113,0,0,0,0,0,0,0,0,36.6256376112972,14.6488755414433,0,0,0,3.0721064139948,2.52076466412852,0,0,0,0.223171457441873,1.2764859772478,0,0,0,0,0,0,0,68.3897533236001,57.4778373790849,0.482259445395058,0.137539436597234,0,0,0,51.3333753760308,0,0,1.10154635083496,0,4.84075816198681,0,0.714695326373367,0,0,0,0,0,0,0,0,0,1.46552233678082,0,23.4002151014407,22.3473096945146,0,0,0,0.471612915298998,0,0,0,0,0,0.544017803369474,0,0,0,0,69.9993862173919,62.3554213649032,60.8427923233589,50.4600092207263,45.81369828472,35.953817303061,0.415045904808692,0,0,0,0,0.468334905806882,0,0,0,0,0,0.251567901752575,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0.308801447160972,0.438568099157414,0.530067437837643,0,0,0,0,0,56.4094419499061,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,1.24415452006595,0.383683113910955,2.04867141653695,0.157265941855896,1.31051565830417,0,0,0,0,0,0,0,17.2811212408435,0,59.8616377899003,90.6858088483744,43.4204096635451,42.8693201263178,11.0911546337556,33.956210959931,54.5787682235657,4.28308260777463,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,47.4789219867314,32.8052801417816,54.978687869315,40.7129501444882,16.4092442705466,0,2.97726707033577,0,0,4.82131652290458,10.7610791110024,11.532346480496,22.3108947524272,0,0.115233987555779,0,105.624965045996,37.8193447986382,0,0,1.17739639275771,92.6981980504411,0,4.56579360254748,0,0,35.7382720883282,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,1.94228651156368,3.18254701254366,9.27851545070559,1.45713297917742,0,0,0,0,0,0,1.46630900405095,0.874238242015829,0,0,0,17.0788366390002,31.189872034344,15.6382619205858,0,0,0,0,0,0,0,3.65168194123259,0.458729283404541,14.7639770645995,0,32.0919833701117,16.5813262329343,1.0580536810308,0,0,0.432626562123789,0,3.27796715891087,18.4979811476698,0.713921808193872,15.2313921001369,2.6649520865105,12.033961886034,0.606229585745915,0,28.1917609415985,34.4431876220111,7.46318936653433,4.52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| ||
|short_description=p1@LGI1 | |||
}} | }} |
Latest revision as of 01:50, 20 September 2015
Short description: | p1@LGI1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LGI1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 2bp_to_uc001kje.2, uc009xui.2_5end |
EntrezGene: | LGI1 |
HGNC: | 6572 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.30e-07 | 5 |