FFCP PHASE1:Mm9::chr13:78335687..78335701,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=13865|HGNC=|MCL_coexpression_id=670|UniProt=F7CII1|association_with_transcript=-53bp_to_ENSMUST00000125176_5end|description=CAGE_peak_16_at_Nr2f1_5end|id=chr13:78335687..78335701,-|ontology_enrichment_celltype=CL:0000117!1.28e-20!23;CL:0000337!1.28e-20!23;CL:0000221!4.23e-18!44;CL:0000133!4.23e-18!44;CL:0002319!5.64e-17!43;CL:0000540!2.36e-15!33;CL:0000047!2.36e-15!33;CL:0000031!2.36e-15!33;CL:0000404!2.36e-15!33;CL:0000055!2.58e-13!50;CL:0000393!7.59e-12!39;CL:0000211!7.59e-12!39;CL:0002609!7.49e-09!6;CL:0002321!5.27e-08!70;CL:0000220!5.27e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,1.91e-32,23;CL:0000337,1.91e-32,23;CL:0000540,8.65e-26,33;CL:0000047,8.65e-26,33;CL:0000031,8.65e-26,33;CL:0000404,8.65e-26,33;CL:0000221,6.08e-22,44;CL:0000133,6.08e-22,44;CL:0000393,1.68e-21,39;CL:0000211,1.68e-21,39;CL:0002319,2.64e-19,43;CL:0002613,4.61e-15,3;CL:0000120,5.93e-14,3;CL:0002609,1.87e-13,6;CL:0002321,6.10e-13,70;CL:0000197,5.96e-11,2;CL:0002491,5.96e-11,2;CL:0000098,5.96e-11,2;CL:0000723,5.91e-08,91;CL:0000048,5.91e-08,91;CL:0000034,2.54e-07,97;CL:0002612,5.92e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.04e-30!75;UBERON:0001016!4.04e-30!75;UBERON:0001017!7.85e-29!73;UBERON:0005743!7.85e-29!73;UBERON:0001049!4.44e-26!52;UBERON:0005068!4.44e-26!52;UBERON:0006241!4.44e-26!52;UBERON:0007135!4.44e-26!52;UBERON:0004121!4.68e-26!102;UBERON:0000924!4.68e-26!102;UBERON:0006601!4.68e-26!102;UBERON:0002020!3.45e-25!34;UBERON:0000033!7.23e-25!63;UBERON:0002346!7.66e-23!71;UBERON:0003075!7.66e-23!71;UBERON:0007284!7.66e-23!71;UBERON:0000955!3.13e-22!50;UBERON:0006238!3.13e-22!50;UBERON:0002616!2.05e-21!49;UBERON:0003056!3.28e-21!49;UBERON:0003080!6.27e-20!40;UBERON:0002791!1.16e-19!29;UBERON:0003528!1.16e-19!29;UBERON:0001893!1.16e-19!29;UBERON:0002780!4.45e-19!39;UBERON:0001890!4.45e-19!39;UBERON:0006240!4.45e-19!39;UBERON:0000956!3.57e-17!21;UBERON:0001869!3.57e-17!21;UBERON:0000203!3.57e-17!21;UBERON:0007811!1.38e-15!86;UBERON:0000153!3.72e-13!94;UBERON:0002619!1.41e-12!17;UBERON:0002021!9.77e-10!10;UBERON:0000411!9.77e-10!10;UBERON:0001950!9.77e-10!10;UBERON:0002240!1.65e-07!6;UBERON:0005174!1.65e-07!6;UBERON:0001137!1.65e-07!6;UBERON:0001948!6.25e-07!5;UBERON:0002315!6.25e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.37e-25,34;UBERON:0003528,2.41e-18,29;UBERON:0002791,2.41e-18,29;UBERON:0001893,2.41e-18,29;UBERON:0001017,2.52e-18,73;UBERON:0001016,9.07e-18,75;UBERON:0001049,1.15e-15,52;UBERON:0005068,1.15e-15,52;UBERON:0006241,1.15e-15,52;UBERON:0007135,1.15e-15,52;UBERON:0004121,2.12e-15,95;UBERON:0000924,2.12e-15,95;UBERON:0006601,2.12e-15,95;UBERON:0000073,5.26e-15,54;UBERON:0010371,2.54e-14,73;UBERON:0000956,1.30e-13,21;UBERON:0001869,1.30e-13,21;UBERON:0000203,1.30e-13,21;UBERON:0002780,3.25e-13,39;UBERON:0001890,3.25e-13,39;UBERON:0006240,3.25e-13,39;UBERON:0003080,7.66e-13,40;UBERON:0002346,2.56e-12,64;UBERON:0003075,2.56e-12,64;UBERON:0007284,2.56e-12,64;UBERON:0004766,5.96e-11,2;UBERON:0008193,5.96e-11,2;UBERON:0005913,5.96e-11,2;UBERON:0011158,5.96e-11,2;UBERON:0005744,5.96e-11,2;UBERON:0003457,5.96e-11,2;UBERON:0008001,5.96e-11,2;UBERON:0007497,5.96e-11,2;UBERON:0009955,5.96e-11,2;UBERON:0003067,5.96e-11,2;UBERON:0002546,5.96e-11,2;UBERON:0007914,5.96e-11,2;UBERON:0005253,5.96e-11,2;UBERON:0002227,5.96e-11,2;UBERON:0001846,5.96e-11,2;UBERON:0004339,5.96e-11,2;UBERON:0002105,5.96e-11,2;UBERON:0001678,5.96e-11,2;UBERON:0003128,5.96e-11,2;UBERON:0001694,5.96e-11,2;UBERON:0004681,5.96e-11,2;UBERON:0001839,5.96e-11,2;UBERON:0001690,5.96e-11,2;UBERON:0001844,5.96e-11,2;UBERON:0001849,5.96e-11,2;UBERON:0002499,5.96e-11,2;UBERON:0001855,5.96e-11,2;UBERON:0011137,5.96e-11,2;UBERON:0001703,5.96e-11,2;UBERON:0010323,5.96e-11,2;UBERON:0003129,5.96e-11,2;UBERON:0003069,5.96e-11,2;UBERON:0003051,5.96e-11,2;UBERON:0004637,5.96e-11,2;UBERON:0004761,5.96e-11,2;UBERON:0010113,5.96e-11,2;UBERON:0009123,5.96e-11,2;UBERON:0010351,5.96e-11,2;UBERON:0009617,5.96e-11,2;UBERON:0005641,5.96e-11,2;UBERON:0010349,5.96e-11,2;UBERON:0002616,6.03e-11,46;UBERON:0010314,7.48e-11,92;UBERON:0000955,1.12e-10,47;UBERON:0006238,1.12e-10,47;UBERON:0003056,3.59e-10,49;UBERON:0000369,3.03e-09,5;UBERON:0002435,3.03e-09,5;UBERON:0000204,3.03e-09,5;UBERON:0010082,3.03e-09,5;UBERON:0001948,1.21e-08,5;UBERON:0002315,1.21e-08,5;UBERON:0002021,1.33e-07,10;UBERON:0000411,1.33e-07,10;UBERON:0001950,1.33e-07,10;UBERON:0004111,1.49e-07,122;UBERON:0002240,2.77e-07,6;UBERON:0005174,2.77e-07,6;UBERON:0001137,2.77e-07,6;UBERON:0002257,5.92e-07,3;UBERON:0002619,9.25e-07,17|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0.384218305321555,2.69592992002042,2.43010688997043,1.47227472945967,0.856952953211411,1.10434270475807,0.979926393719632,2.01275489138296,0.919218786610021,0,0.893811366596314,0.768032666281217,1.97829431595291,1.28082701043374,2.08365348222704,0,0,0.916789486660861,1.17851434189467,1.28134512719193,0.559198337475902,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,2.81686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0.376963056338593,0.521472960576829,0.511430914660661,0.20778804455956,0.162241263067758,0,0,0,0,0.910843100738926,0.689706313300419,0,0.30140963567143,0,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,0.572895513439397,1.03111909406213,0.685082519770642,0.755393897389701,1.35004500046361,1.35096360967266,0,0.51776031175182,0.62272408550506,0,0.512200817262403,0,0.209613162627982,0.183843508450014,0.666740183404846,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.287177344778066,0,0.347652977834566,0,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p16@Nr2f1}} | ||
|EntrezGene=13865 | |||
|HGNC= | |||
|MCL_coexpression_id=670 | |||
|UniProt=F7CII1 | |||
|association_with_transcript=-53bp_to_ENSMUST00000125176_5end | |||
|description=CAGE_peak_16_at_Nr2f1_5end | |||
|id=chr13:78335687..78335701,- | |||
|ontology_enrichment_celltype=CL:0000117!1.28e-20!23;CL:0000337!1.28e-20!23;CL:0000221!4.23e-18!44;CL:0000133!4.23e-18!44;CL:0002319!5.64e-17!43;CL:0000540!2.36e-15!33;CL:0000047!2.36e-15!33;CL:0000031!2.36e-15!33;CL:0000404!2.36e-15!33;CL:0000055!2.58e-13!50;CL:0000393!7.59e-12!39;CL:0000211!7.59e-12!39;CL:0002609!7.49e-09!6;CL:0002321!5.27e-08!70;CL:0000220!5.27e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.91e-32,23;CL:0000337,1.91e-32,23;CL:0000540,8.65e-26,33;CL:0000047,8.65e-26,33;CL:0000031,8.65e-26,33;CL:0000404,8.65e-26,33;CL:0000221,6.08e-22,44;CL:0000133,6.08e-22,44;CL:0000393,1.68e-21,39;CL:0000211,1.68e-21,39;CL:0002319,2.64e-19,43;CL:0002613,4.61e-15,3;CL:0000120,5.93e-14,3;CL:0002609,1.87e-13,6;CL:0002321,6.10e-13,70;CL:0000197,5.96e-11,2;CL:0002491,5.96e-11,2;CL:0000098,5.96e-11,2;CL:0000723,5.91e-08,91;CL:0000048,5.91e-08,91;CL:0000034,2.54e-07,97;CL:0002612,5.92e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.04e-30!75;UBERON:0001016!4.04e-30!75;UBERON:0001017!7.85e-29!73;UBERON:0005743!7.85e-29!73;UBERON:0001049!4.44e-26!52;UBERON:0005068!4.44e-26!52;UBERON:0006241!4.44e-26!52;UBERON:0007135!4.44e-26!52;UBERON:0004121!4.68e-26!102;UBERON:0000924!4.68e-26!102;UBERON:0006601!4.68e-26!102;UBERON:0002020!3.45e-25!34;UBERON:0000033!7.23e-25!63;UBERON:0002346!7.66e-23!71;UBERON:0003075!7.66e-23!71;UBERON:0007284!7.66e-23!71;UBERON:0000955!3.13e-22!50;UBERON:0006238!3.13e-22!50;UBERON:0002616!2.05e-21!49;UBERON:0003056!3.28e-21!49;UBERON:0003080!6.27e-20!40;UBERON:0002791!1.16e-19!29;UBERON:0003528!1.16e-19!29;UBERON:0001893!1.16e-19!29;UBERON:0002780!4.45e-19!39;UBERON:0001890!4.45e-19!39;UBERON:0006240!4.45e-19!39;UBERON:0000956!3.57e-17!21;UBERON:0001869!3.57e-17!21;UBERON:0000203!3.57e-17!21;UBERON:0007811!1.38e-15!86;UBERON:0000153!3.72e-13!94;UBERON:0002619!1.41e-12!17;UBERON:0002021!9.77e-10!10;UBERON:0000411!9.77e-10!10;UBERON:0001950!9.77e-10!10;UBERON:0002240!1.65e-07!6;UBERON:0005174!1.65e-07!6;UBERON:0001137!1.65e-07!6;UBERON:0001948!6.25e-07!5;UBERON:0002315!6.25e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.37e-25,34;UBERON:0003528,2.41e-18,29;UBERON:0002791,2.41e-18,29;UBERON:0001893,2.41e-18,29;UBERON:0001017,2.52e-18,73;UBERON:0001016,9.07e-18,75;UBERON:0001049,1.15e-15,52;UBERON:0005068,1.15e-15,52;UBERON:0006241,1.15e-15,52;UBERON:0007135,1.15e-15,52;UBERON:0004121,2.12e-15,95;UBERON:0000924,2.12e-15,95;UBERON:0006601,2.12e-15,95;UBERON:0000073,5.26e-15,54;UBERON:0010371,2.54e-14,73;UBERON:0000956,1.30e-13,21;UBERON:0001869,1.30e-13,21;UBERON:0000203,1.30e-13,21;UBERON:0002780,3.25e-13,39;UBERON:0001890,3.25e-13,39;UBERON:0006240,3.25e-13,39;UBERON:0003080,7.66e-13,40;UBERON:0002346,2.56e-12,64;UBERON:0003075,2.56e-12,64;UBERON:0007284,2.56e-12,64;UBERON:0004766,5.96e-11,2;UBERON:0008193,5.96e-11,2;UBERON:0005913,5.96e-11,2;UBERON:0011158,5.96e-11,2;UBERON:0005744,5.96e-11,2;UBERON:0003457,5.96e-11,2;UBERON:0008001,5.96e-11,2;UBERON:0007497,5.96e-11,2;UBERON:0009955,5.96e-11,2;UBERON:0003067,5.96e-11,2;UBERON:0002546,5.96e-11,2;UBERON:0007914,5.96e-11,2;UBERON:0005253,5.96e-11,2;UBERON:0002227,5.96e-11,2;UBERON:0001846,5.96e-11,2;UBERON:0004339,5.96e-11,2;UBERON:0002105,5.96e-11,2;UBERON:0001678,5.96e-11,2;UBERON:0003128,5.96e-11,2;UBERON:0001694,5.96e-11,2;UBERON:0004681,5.96e-11,2;UBERON:0001839,5.96e-11,2;UBERON:0001690,5.96e-11,2;UBERON:0001844,5.96e-11,2;UBERON:0001849,5.96e-11,2;UBERON:0002499,5.96e-11,2;UBERON:0001855,5.96e-11,2;UBERON:0011137,5.96e-11,2;UBERON:0001703,5.96e-11,2;UBERON:0010323,5.96e-11,2;UBERON:0003129,5.96e-11,2;UBERON:0003069,5.96e-11,2;UBERON:0003051,5.96e-11,2;UBERON:0004637,5.96e-11,2;UBERON:0004761,5.96e-11,2;UBERON:0010113,5.96e-11,2;UBERON:0009123,5.96e-11,2;UBERON:0010351,5.96e-11,2;UBERON:0009617,5.96e-11,2;UBERON:0005641,5.96e-11,2;UBERON:0010349,5.96e-11,2;UBERON:0002616,6.03e-11,46;UBERON:0010314,7.48e-11,92;UBERON:0000955,1.12e-10,47;UBERON:0006238,1.12e-10,47;UBERON:0003056,3.59e-10,49;UBERON:0000369,3.03e-09,5;UBERON:0002435,3.03e-09,5;UBERON:0000204,3.03e-09,5;UBERON:0010082,3.03e-09,5;UBERON:0001948,1.21e-08,5;UBERON:0002315,1.21e-08,5;UBERON:0002021,1.33e-07,10;UBERON:0000411,1.33e-07,10;UBERON:0001950,1.33e-07,10;UBERON:0004111,1.49e-07,122;UBERON:0002240,2.77e-07,6;UBERON:0005174,2.77e-07,6;UBERON:0001137,2.77e-07,6;UBERON:0002257,5.92e-07,3;UBERON:0002619,9.25e-07,17 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0.384218305321555,2.69592992002042,2.43010688997043,1.47227472945967,0.856952953211411,1.10434270475807,0.979926393719632,2.01275489138296,0.919218786610021,0,0.893811366596314,0.768032666281217,1.97829431595291,1.28082701043374,2.08365348222704,0,0,0.916789486660861,1.17851434189467,1.28134512719193,0.559198337475902,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,2.81686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0.376963056338593,0.521472960576829,0.511430914660661,0.20778804455956,0.162241263067758,0,0,0,0,0.910843100738926,0.689706313300419,0,0.30140963567143,0,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,0.572895513439397,1.03111909406213,0.685082519770642,0.755393897389701,1.35004500046361,1.35096360967266,0,0.51776031175182,0.62272408550506,0,0.512200817262403,0,0.209613162627982,0.183843508450014,0.666740183404846,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.287177344778066,0,0.347652977834566,0,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p16@Nr2f1 | |||
}} |
Revision as of 01:08, 13 September 2013
Short description: | p16@Nr2f1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Nr2f1_5end |
Coexpression cluster: | MCL_coexpression_mm9:670 |
Association with transcript: | -53bp_to_ENSMUST00000125176_5end |
EntrezGene: | Nr2f1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.91e-32 | 23 |
neuroblast (sensu Vertebrata) | 1.91e-32 | 23 |
neuron | 8.65e-26 | 33 |
neuronal stem cell | 8.65e-26 | 33 |
neuroblast | 8.65e-26 | 33 |
electrically signaling cell | 8.65e-26 | 33 |
ectodermal cell | 6.08e-22 | 44 |
neurectodermal cell | 6.08e-22 | 44 |
electrically responsive cell | 1.68e-21 | 39 |
electrically active cell | 1.68e-21 | 39 |
neural cell | 2.64e-19 | 43 |
striatum neuron | 4.61e-15 | 3 |
granule cell | 5.93e-14 | 3 |
neuron of cerebral cortex | 1.87e-13 | 6 |
embryonic cell | 6.10e-13 | 70 |
receptor cell | 5.96e-11 | 2 |
auditory epithelial cell | 5.96e-11 | 2 |
sensory epithelial cell | 5.96e-11 | 2 |
somatic stem cell | 5.91e-08 | 91 |
multi fate stem cell | 5.91e-08 | 91 |
stem cell | 2.54e-07 | 97 |
neuron of the ventral spinal cord | 5.92e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.