FFCP PHASE1:Hg19::chr17:68101117..68101162,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3773|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6262|TSSclassifier=W|UniProt=Q9NPI9,Q8N538|association_with_transcript=122bp_to_ENST00000392670,NM_170742,uc002jip.2_5end|coexpression_cluster_id=C275|description=CAGE_peak_2_at_KCNJ16_5end|id=chr17:68101117..68101162,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.29e-27;82!UBERON:0006215;2.04e-13;3!UBERON:0006241;4.05e-13;3!UBERON:0003057;4.05e-13;3!UBERON:0010122;3.31e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.90e-115!57;UBERON:0005068!1.90e-115!57;UBERON:0006241!1.90e-115!57;UBERON:0007135!1.90e-115!57;UBERON:0001017!2.69e-97!82;UBERON:0002616!2.07e-96!59;UBERON:0005743!2.90e-92!86;UBERON:0000955!2.25e-91!69;UBERON:0006238!2.25e-91!69;UBERON:0002780!1.40e-87!41;UBERON:0001890!1.40e-87!41;UBERON:0006240!1.40e-87!41;UBERON:0003080!2.64e-85!42;UBERON:0003075!1.48e-82!86;UBERON:0007284!1.48e-82!86;UBERON:0000073!1.86e-82!94;UBERON:0001016!1.86e-82!94;UBERON:0002346!2.36e-78!90;UBERON:0002020!5.09e-74!34;UBERON:0003528!5.09e-74!34;UBERON:0001893!2.20e-73!34;UBERON:0002791!1.29e-70!33;UBERON:0001869!7.39e-68!32;UBERON:0007023!7.63e-62!115;UBERON:0002619!1.18e-56!22;UBERON:0003056!4.99e-56!61;UBERON:0001950!3.96e-51!20;UBERON:0000956!2.11e-49!25;UBERON:0000203!2.11e-49!25;UBERON:0000033!9.30e-49!123;UBERON:0000153!6.10e-46!129;UBERON:0007811!6.10e-46!129;UBERON:0004121!3.75e-44!169;UBERON:0000924!7.74e-43!173;UBERON:0006601!7.74e-43!173;UBERON:0003076!2.38e-29!15;UBERON:0003057!2.38e-29!15;UBERON:0000025!8.66e-27!194;UBERON:0002308!4.69e-26!9;UBERON:0000125!4.69e-26!9;UBERON:0002420!2.04e-25!9;UBERON:0007245!2.04e-25!9;UBERON:0010009!2.04e-25!9;UBERON:0010011!2.04e-25!9;UBERON:0000454!2.04e-25!9;UBERON:0004733!5.68e-21!12;UBERON:0002028!5.68e-21!12;UBERON:0007277!5.68e-21!12;UBERON:0009663!4.18e-20!7;UBERON:0002298!1.66e-19!8;UBERON:0004732!3.33e-19!13;UBERON:0004111!3.72e-19!241;UBERON:0000200!1.51e-17!6;UBERON:0001871!3.00e-17!7;UBERON:0000483!1.60e-15!309;UBERON:0000119!3.01e-15!312;UBERON:0000064!3.29e-15!219;UBERON:0000477!3.86e-15!286;UBERON:0001894!4.68e-15!7;UBERON:0006222!4.68e-15!7;UBERON:0000349!5.78e-15!5;UBERON:0002021!8.45e-15!5;UBERON:0001872!1.16e-14!5;UBERON:0002680!6.74e-13!9;UBERON:0001895!6.74e-13!9;UBERON:0010092!6.74e-13!9;UBERON:0000475!1.06e-12!365;UBERON:0000369!1.20e-11!4;UBERON:0002435!1.20e-11!4;UBERON:0000204!1.20e-11!4;UBERON:0010082!1.20e-11!4;UBERON:0000062!5.11e-11!511;UBERON:0000988!9.56e-11!3;UBERON:0001896!1.39e-10!3;UBERON:0005290!1.39e-10!3;UBERON:0010096!1.39e-10!3;UBERON:0006331!1.48e-10!3;UBERON:0002240!1.58e-10!3;UBERON:0002771!8.93e-10!3;UBERON:0005383!3.96e-09!3;UBERON:0005382!3.96e-09!3;UBERON:0002148!1.15e-07!2;UBERON:0009662!1.15e-07!2;UBERON:0000467!2.11e-07!625;UBERON:0000481!2.20e-07!347;UBERON:0000480!2.29e-07!626;UBERON:0001875!2.66e-07!2;UBERON:0006514!2.66e-07!2;UBERON:0001897!2.82e-07!2;UBERON:0001954!4.07e-07!2;UBERON:0003022!4.07e-07!2;UBERON:0002421!4.07e-07!2;UBERON:0002600!4.07e-07!2;UBERON:0003296!5.22e-07!4;UBERON:0010133!5.22e-07!4;UBERON:0001876!5.33e-07!2;UBERON:0001870!8.83e-07!2;UBERON:0001905!9.36e-07!2;UBERON:0002757!9.36e-07!2;UBERON:0010134!9.36e-07!2;UBERON:0002784!9.36e-07!2;UBERON:0005408!9.36e-07!2;UBERON:0001899!9.36e-07!2|ontology_enrichment_uberon_v019=UBERON:0000073;7.91e-72;53!UBERON:0002616;7.91e-72;53!UBERON:0002780;2.68e-71;41!UBERON:0001890;2.68e-71;41!UBERON:0001893;3.24e-71;34!UBERON:0003528;5.55e-70;34!UBERON:0002020;5.55e-70;34!UBERON:0002791;2.95e-67;32!UBERON:0001869;4.33e-67;32!UBERON:0002619;2.13e-60;22!UBERON:0001950;2.05e-53;20!UBERON:0000956;7.56e-53;25!UBERON:0000203;7.56e-53;25!UBERON:0000955;2.29e-50;68!UBERON:0001017;1.44e-48;75!UBERON:0001016;1.15e-38;83!UBERON:0000125;3.00e-33;9!UBERON:0002308;3.00e-33;9!UBERON:0002420;2.25e-32;9!UBERON:0007245;2.25e-32;9!UBERON:0010009;2.25e-32;9!UBERON:0010011;2.25e-32;9!UBERON:0000454;2.25e-32;9!UBERON:0004733;6.41e-27;12!UBERON:0002028;6.41e-27;12!UBERON:0009663;1.47e-25;7!UBERON:0002298;8.05e-25;6!UBERON:0004732;1.04e-24;13!UBERON:0000200;4.64e-22;6!UBERON:0007023;1.84e-20;114!UBERON:0001894;4.38e-19;7!UBERON:0000349;7.85e-19;5!UBERON:0001872;1.67e-18;5!UBERON:0002680;1.83e-16;9!UBERON:0001895;1.83e-16;9!UBERON:0002784;1.60e-15;4!UBERON:0011216;7.35e-15;132!UBERON:0000369;1.21e-14;4!UBERON:0002435;1.21e-14;4!UBERON:0000204;1.21e-14;4!UBERON:0000988;2.12e-13;3!UBERON:0001896;3.52e-13;3!UBERON:0005290;3.52e-13;3!UBERON:0001871;3.75e-13;6!UBERON:0002240;4.05e-13;3!UBERON:0005174;4.05e-13;3!UBERON:0001137;4.05e-13;3!UBERON:0002021;1.59e-12;5!UBERON:0001870;7.08e-12;3!UBERON:0005383;2.34e-11;3!UBERON:0005382;2.34e-11;3!UBERON:0010314;2.88e-10;132!UBERON:0002148;1.95e-09;2!UBERON:0006331;1.95e-09;2!UBERON:0009662;1.95e-09;2!UBERON:0001875;5.75e-09;2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3773 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6262 | |||
|TSSclassifier=W | |||
|UniProt=Q9NPI9,Q8N538 | |||
|association_with_transcript=122bp_to_ENST00000392670,NM_170742,uc002jip.2_5end | |||
|coexpression_cluster_id=C275 | |||
|description=CAGE_peak_2_at_KCNJ16_5end | |||
|id=chr17:68101117..68101162,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.29e-27;82!UBERON:0006215;2.04e-13;3!UBERON:0006241;4.05e-13;3!UBERON:0003057;4.05e-13;3!UBERON:0010122;3.31e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@KCNJ16 | |||
}} |
Revision as of 15:18, 11 September 2013
Short description: | p2@KCNJ16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_KCNJ16_5end |
Coexpression cluster: | C275_pons_medulla_cerebellum_locus_thalamus_diencephalon_spinal |
Association with transcript: | 122bp_to_ENST00000392670, NM_170742, uc002jip.2_5end |
EntrezGene: | KCNJ16 |
HGNC: | 6262 |
UniProt: | Q9NPI9Q8N538 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.