FFCP PHASE1:Hg19::chr20:58279639..58279642,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C402 | |||
|description=CAGE_peak_at_chr20:58279639..58279642,+ | |||
|id=chr20:58279639..58279642,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.85e-21;3!UBERON:0003057;4.85e-21;3!UBERON:0006601;2.33e-10;82!UBERON:0005425;1.51e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.33e-72!57;UBERON:0005068!3.33e-72!57;UBERON:0006241!3.33e-72!57;UBERON:0007135!3.33e-72!57;UBERON:0000073!1.90e-65!94;UBERON:0001016!1.90e-65!94;UBERON:0001017!5.26e-65!82;UBERON:0005743!2.81e-61!86;UBERON:0002616!2.30e-59!59;UBERON:0002780!1.22e-58!41;UBERON:0001890!1.22e-58!41;UBERON:0006240!1.22e-58!41;UBERON:0003080!5.32e-57!42;UBERON:0000955!3.90e-56!69;UBERON:0006238!3.90e-56!69;UBERON:0003075!9.09e-54!86;UBERON:0007284!9.09e-54!86;UBERON:0002346!7.09e-53!90;UBERON:0002020!9.10e-53!34;UBERON:0003528!9.10e-53!34;UBERON:0001893!1.02e-52!34;UBERON:0002791!7.01e-51!33;UBERON:0001869!1.19e-48!32;UBERON:0002619!1.43e-41!22;UBERON:0007023!5.57e-40!115;UBERON:0003056!5.49e-38!61;UBERON:0001950!1.93e-37!20;UBERON:0000956!6.01e-36!25;UBERON:0000203!6.01e-36!25;UBERON:0000924!1.70e-34!173;UBERON:0006601!1.70e-34!173;UBERON:0004121!2.31e-34!169;UBERON:0000033!1.05e-29!123;UBERON:0000153!1.16e-27!129;UBERON:0007811!1.16e-27!129;UBERON:0002420!1.89e-18!9;UBERON:0007245!1.89e-18!9;UBERON:0010009!1.89e-18!9;UBERON:0010011!1.89e-18!9;UBERON:0000454!1.89e-18!9;UBERON:0002308!2.91e-18!9;UBERON:0000125!2.91e-18!9;UBERON:0000025!3.49e-17!194;UBERON:0003076!9.35e-16!15;UBERON:0003057!9.35e-16!15;UBERON:0009663!1.81e-14!7;UBERON:0001871!3.82e-13!7;UBERON:0000200!7.83e-13!6;UBERON:0002298!1.27e-12!8;UBERON:0004732!3.14e-12!13;UBERON:0004111!9.76e-12!241;UBERON:0000349!1.48e-11!5;UBERON:0001872!2.47e-11!5;UBERON:0002021!8.26e-11!5;UBERON:0004733!2.01e-10!12;UBERON:0002028!2.01e-10!12;UBERON:0007277!2.01e-10!12;UBERON:0000477!2.36e-09!286;UBERON:0000064!5.00e-09!219;UBERON:0000369!3.35e-08!4;UBERON:0002435!3.35e-08!4;UBERON:0000204!3.35e-08!4;UBERON:0010082!3.35e-08!4;UBERON:0000483!4.25e-08!309;UBERON:0000119!6.88e-08!312;UBERON:0002240!9.46e-08!3;UBERON:0001894!1.46e-07!7;UBERON:0006222!1.46e-07!7;UBERON:0006331!1.59e-07!3;UBERON:0002771!1.97e-07!3;UBERON:0000988!2.15e-07!3;UBERON:0001896!7.92e-07!3;UBERON:0005290!7.92e-07!3;UBERON:0010096!7.92e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.30e-48;22!UBERON:0003528;2.39e-43;34!UBERON:0002020;2.39e-43;34!UBERON:0002780;6.75e-43;41!UBERON:0001890;6.75e-43;41!UBERON:0000956;2.85e-42;25!UBERON:0000203;2.85e-42;25!UBERON:0001893;3.96e-42;34!UBERON:0002791;4.27e-42;32!UBERON:0001869;2.09e-38;32!UBERON:0001950;1.39e-37;20!UBERON:0000073;2.34e-34;53!UBERON:0002616;2.34e-34;53!UBERON:0001016;1.56e-24;83!UBERON:0002240;4.85e-21;3!UBERON:0005174;4.85e-21;3!UBERON:0001137;4.85e-21;3!UBERON:0001017;3.97e-20;75!UBERON:0000955;1.04e-16;68!UBERON:0001875;1.70e-15;2!UBERON:0006514;1.70e-15;2!UBERON:0001954;4.15e-15;2!UBERON:0003022;4.15e-15;2!UBERON:0002421;4.15e-15;2!UBERON:0002600;4.15e-15;2!UBERON:0001897;5.31e-15;2!UBERON:0005162;5.31e-15;2!UBERON:0000122;5.31e-15;2!UBERON:0010225;5.31e-15;2!UBERON:0000349;2.25e-13;5!UBERON:0001872;3.56e-13;5!UBERON:0002420;7.16e-13;9!UBERON:0007245;7.16e-13;9!UBERON:0010009;7.16e-13;9!UBERON:0010011;7.16e-13;9!UBERON:0000454;7.16e-13;9!UBERON:0002021;7.33e-13;5!UBERON:0000125;1.05e-12;9!UBERON:0002308;1.05e-12;9!UBERON:0000988;4.72e-10;3!UBERON:0011216;7.92e-10;132!UBERON:0009663;1.07e-09;7!UBERON:0001871;1.72e-09;6!UBERON:0004732;1.08e-08;13!UBERON:0000941;1.51e-08;1!UBERON:0001785;1.51e-08;1!UBERON:0002464;1.51e-08;1!UBERON:0004904;1.51e-08;1!UBERON:0001021;1.51e-08;1!UBERON:0002022;3.69e-08;1!UBERON:0002336;3.69e-08;1!UBERON:0002038;3.69e-08;1!UBERON:0011215;3.69e-08;1!UBERON:0001018;3.69e-08;1!UBERON:0009661;3.69e-08;1!UBERON:0002950;3.69e-08;1!UBERON:0002473;3.69e-08;1!UBERON:0005340;3.69e-08;1!UBERON:0003544;3.69e-08;1!UBERON:0005970;3.69e-08;1!UBERON:0002316;3.69e-08;1!UBERON:0001020;3.69e-08;1!UBERON:0001891;3.69e-08;1!UBERON:0002437;3.69e-08;1!UBERON:0007023;3.88e-08;114!UBERON:0002784;6.14e-08;4!UBERON:0002680;2.31e-07;9!UBERON:0001895;2.31e-07;9!UBERON:0010314;2.39e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.32e-71,56;UBERON:0005068,6.32e-71,56;UBERON:0006241,6.32e-71,56;UBERON:0007135,6.32e-71,56;UBERON:0000073,1.77e-57,53;UBERON:0002616,1.77e-57,53;UBERON:0001017,4.21e-56,81;UBERON:0002780,1.66e-55,41;UBERON:0001890,1.66e-55,41;UBERON:0003080,1.66e-55,41;UBERON:0006240,1.66e-55,41;UBERON:0001016,2.26e-54,89;UBERON:0003528,2.39e-53,34;UBERON:0002020,2.39e-53,34;UBERON:0001893,2.64e-53,34;UBERON:0003075,1.23e-51,82;UBERON:0007284,1.23e-51,82;UBERON:0002791,3.56e-50,32;UBERON:0002346,4.61e-49,86;UBERON:0000955,7.00e-48,68;UBERON:0006238,7.00e-48,68;UBERON:0002619,1.27e-47,22;UBERON:0001869,6.73e-44,32;UBERON:0000956,7.41e-42,25;UBERON:0000203,7.41e-42,25;UBERON:0003056,1.02e-40,61;UBERON:0010371,6.70e-40,104;UBERON:0001950,3.04e-37,20;UBERON:0010314,1.45e-30,132;UBERON:0004121,1.27e-26,171;UBERON:0000924,1.27e-26,171;UBERON:0006601,1.27e-26,171;UBERON:0007023,3.79e-25,114;UBERON:0002240,2.53e-21,3;UBERON:0005174,2.53e-21,3;UBERON:0001137,2.53e-21,3;UBERON:0011216,4.70e-21,223;UBERON:0000025,7.52e-18,192;UBERON:0003076,5.68e-16,15;UBERON:0003057,5.68e-16,15;UBERON:0001875,1.77e-15,2;UBERON:0006514,1.77e-15,2;UBERON:0001897,2.53e-15,2;UBERON:0010225,2.53e-15,2;UBERON:0005162,5.92e-15,2;UBERON:0000122,5.92e-15,2;UBERON:0001954,6.35e-15,2;UBERON:0003022,6.35e-15,2;UBERON:0002421,6.35e-15,2;UBERON:0002600,6.35e-15,2;UBERON:0004111,2.18e-13,240;UBERON:0000349,3.16e-13,5;UBERON:0001872,4.22e-13,5;UBERON:0002420,6.35e-13,9;UBERON:0007245,6.35e-13,9;UBERON:0010009,6.35e-13,9;UBERON:0010011,6.35e-13,9;UBERON:0000454,6.35e-13,9;UBERON:0002021,6.64e-13,5;UBERON:0000125,8.89e-13,9;UBERON:0002308,8.89e-13,9;UBERON:0000483,1.28e-10,306;UBERON:0000119,1.80e-10,309;UBERON:0000988,6.81e-10,3;UBERON:0009663,9.02e-10,7;UBERON:0001871,2.17e-09,6;UBERON:0004732,1.05e-08,13;UBERON:0000941,1.31e-08,1;UBERON:0001785,1.31e-08,1;UBERON:0002464,1.31e-08,1;UBERON:0004904,1.31e-08,1;UBERON:0001021,1.31e-08,1;UBERON:0003902,1.31e-08,1;UBERON:0005425,1.31e-08,1;UBERON:0002038,2.33e-08,1;UBERON:0009661,2.33e-08,1;UBERON:0002950,2.33e-08,1;UBERON:0001891,2.33e-08,1;UBERON:0009616,2.33e-08,1;UBERON:0010286,2.33e-08,1;UBERON:0002784,4.26e-08,4;UBERON:0002336,4.72e-08,1;UBERON:0011215,4.72e-08,1;UBERON:0001018,4.72e-08,1;UBERON:0002473,4.72e-08,1;UBERON:0005340,4.72e-08,1;UBERON:0003544,4.72e-08,1;UBERON:0005970,4.72e-08,1;UBERON:0002316,4.72e-08,1;UBERON:0001020,4.72e-08,1;UBERON:0002437,4.72e-08,1;UBERON:0002022,7.16e-08,1;UBERON:0002680,2.34e-07,9;UBERON:0001895,2.34e-07,9;UBERON:0010092,2.34e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,2.31986643833309,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865615277858669,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0.851692475380653,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,2.11004124615769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.927680981618513,5.98841394003583,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0.173624994933292,0.885741385813839,0.241192877250816,0,1.87984741883082,0.886642856860642,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0,1.34802265961354,0,0.702793337176017,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0.696418755514666,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,2.46429682005587,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,1.22583065500418,0,0,0,0,0,1.15424157650247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0.79339561045614,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,1.3771002377715,0.573409195690071,0.554645257684261,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0.245772908753719,0,0,0.320075189082423,0,0,0,0,0,0.255788742607303,0.107824811396682,0.157265941855896,0.218419276384028,0,0,0.247871528518004,0,0,0,0,0,0,0.770750701157514,1.41696576325585,1.91560630868582,0.205116364240755,1.26035848110859,0.622415272177961,0.645902582527404,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,1.56215619722769,1.2401207790071,0.760989722326882,4.92277328116398,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,1.22345519358297,0.72350050919134,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,1.76677620403451,1.48523200163543,1.6906229103336,0,0,0.128915775947154,0,0,0,0.0802413666891683,0.730336388246517,0,1.86341458096887,0,1.15585533324555,1.74540276136151,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,2.48750831837634,1.96522692137601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr20:58279639..58279642,+ | |||
}} |
Revision as of 12:33, 21 January 2014
Short description: | p@chr20:58279639..58279642, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:58279639..58279642, + |
Coexpression cluster: | C402_parietal_occipital_temporal_thalamus_optic_globus_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data