FFCP PHASE1:Hg19::chr9:139876143..139876170,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401562 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34436 | |||
|TSSclassifier=not | |||
|UniProt=F2Z3E7 | |||
|association_with_transcript=-185bp_to_ENST00000482657_5end | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_1_at_LCNL1_5end | |||
|id=chr9:139876143..139876170,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002575;3.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,3.62e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.30e-16;82!UBERON:0006241;3.41e-11;3!UBERON:0003057;3.41e-11;3!UBERON:0010122;3.62e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-78!115;UBERON:0001049!2.27e-54!57;UBERON:0005068!2.27e-54!57;UBERON:0006241!2.27e-54!57;UBERON:0007135!2.27e-54!57;UBERON:0002616!6.75e-49!59;UBERON:0005743!3.61e-45!86;UBERON:0001017!5.19e-44!82;UBERON:0002780!5.52e-44!41;UBERON:0001890!5.52e-44!41;UBERON:0006240!5.52e-44!41;UBERON:0003075!1.01e-43!86;UBERON:0007284!1.01e-43!86;UBERON:0000955!2.61e-43!69;UBERON:0006238!2.61e-43!69;UBERON:0003080!1.14e-42!42;UBERON:0002346!1.37e-42!90;UBERON:0000073!2.92e-41!94;UBERON:0001016!2.92e-41!94;UBERON:0002020!3.66e-34!34;UBERON:0003528!3.66e-34!34;UBERON:0001893!6.55e-34!34;UBERON:0002791!1.46e-32!33;UBERON:0001869!1.01e-30!32;UBERON:0003056!1.58e-29!61;UBERON:0002619!5.94e-25!22;UBERON:0000153!1.20e-23!129;UBERON:0007811!1.20e-23!129;UBERON:0000033!1.75e-23!123;UBERON:0001950!5.52e-22!20;UBERON:0004121!6.37e-22!169;UBERON:0000924!7.62e-22!173;UBERON:0006601!7.62e-22!173;UBERON:0000956!2.53e-21!25;UBERON:0000203!2.53e-21!25;UBERON:0000025!1.62e-15!194;UBERON:0002308!5.43e-15!9;UBERON:0000125!5.43e-15!9;UBERON:0002420!1.03e-14!9;UBERON:0007245!1.03e-14!9;UBERON:0010009!1.03e-14!9;UBERON:0010011!1.03e-14!9;UBERON:0000454!1.03e-14!9;UBERON:0004111!4.21e-14!241;UBERON:0000477!4.47e-14!286;UBERON:0003076!1.66e-12!15;UBERON:0003057!1.66e-12!15;UBERON:0009663!1.07e-11!7;UBERON:0001894!1.16e-11!7;UBERON:0006222!1.16e-11!7;UBERON:0000483!1.60e-10!309;UBERON:0002298!1.63e-10!8;UBERON:0000119!3.06e-10!312;UBERON:0000062!3.74e-10!511;UBERON:0000475!4.94e-10!365;UBERON:0000200!5.49e-10!6;UBERON:0001871!6.59e-10!7;UBERON:0004732!1.03e-09!13;UBERON:0000064!1.25e-09!219;UBERON:0000349!5.75e-09!5;UBERON:0004733!2.88e-08!12;UBERON:0002028!2.88e-08!12;UBERON:0007277!2.88e-08!12;UBERON:0000369!2.44e-07!4;UBERON:0002435!2.44e-07!4;UBERON:0000204!2.44e-07!4;UBERON:0010082!2.44e-07!4;UBERON:0003296!8.14e-07!4;UBERON:0010133!8.14e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.17e-37;41!UBERON:0001890;6.17e-37;41!UBERON:0001893;6.59e-34;34!UBERON:0000073;9.98e-34;53!UBERON:0002616;9.98e-34;53!UBERON:0003528;2.35e-32;34!UBERON:0002020;2.35e-32;34!UBERON:0001869;2.52e-30;32!UBERON:0002791;7.61e-30;32!UBERON:0002619;1.83e-27;22!UBERON:0001017;1.41e-25;75!UBERON:0000955;8.42e-25;68!UBERON:0000956;7.11e-24;25!UBERON:0000203;7.11e-24;25!UBERON:0001950;1.58e-22;20!UBERON:0001016;1.03e-19;83!UBERON:0000125;1.08e-17;9!UBERON:0002308;1.08e-17;9!UBERON:0002420;4.02e-17;9!UBERON:0007245;4.02e-17;9!UBERON:0010009;4.02e-17;9!UBERON:0010011;4.02e-17;9!UBERON:0000454;4.02e-17;9!UBERON:0001894;1.50e-16;7!UBERON:0007023;2.04e-16;114!UBERON:0001871;1.02e-15;6!UBERON:0002784;1.67e-13;4!UBERON:0000200;4.80e-13;6!UBERON:0009663;1.00e-11;7!UBERON:0002240;3.41e-11;3!UBERON:0005174;3.41e-11;3!UBERON:0001137;3.41e-11;3!UBERON:0000349;1.25e-10;5!UBERON:0005383;3.15e-10;3!UBERON:0005382;3.15e-10;3!UBERON:0002298;1.49e-09;6!UBERON:0011216;1.86e-09;132!UBERON:0004732;4.88e-09;13!UBERON:0005162;2.64e-08;2!UBERON:0000122;2.64e-08;2!UBERON:0002148;3.09e-08;2!UBERON:0006331;3.09e-08;2!UBERON:0009662;3.09e-08;2!UBERON:0001897;5.01e-08;2!UBERON:0010225;5.01e-08;2!UBERON:0010314;5.17e-08;132!UBERON:0000369;8.93e-08;4!UBERON:0002435;8.93e-08;4!UBERON:0000204;8.93e-08;4!UBERON:0003296;1.49e-07;4!UBERON:0010133;1.49e-07;4!UBERON:0001876;1.80e-07;2!UBERON:0001954;1.80e-07;2!UBERON:0003022;1.80e-07;2!UBERON:0002421;1.80e-07;2!UBERON:0002600;1.80e-07;2!UBERON:0002771;3.62e-07;2!UBERON:0001905;3.62e-07;2!UBERON:0001873;3.62e-07;2!UBERON:0002757;3.62e-07;2!UBERON:0010134;3.62e-07;2!UBERON:0005408;3.62e-07;2!UBERON:0001899;3.62e-07;2!UBERON:0004733;6.83e-07;12!UBERON:0002028;6.83e-07;12 | |||
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|phase1_expression=0,0,1.26858963686374,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0.715471872916026,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,1.36221684880438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.428933980974443,4.88359444852299,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.537182889719687,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.3071909813522,2.40200396667599,0,0,0,0,0,0,0,0.306923946576125,0,2.56278298511402,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,1.116475108079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.47748896947538,0,0,1.9882952955326,2.11004124615769,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,3.87733098438087,2.04089815956073,0,0,0,0,0,0,0,0,0,0,1.77148277162768,1.32656082487949,0,0.995213339381022,1.77328571372128,0.87754158861589,0,0,3.61666214967846,1.36730467016401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77446344691791,0,3.51396668588009,0,0,0,1.18375320854817,0,1.53036380815245,3.72800819808079,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0.451961481561065,0,0,0.886351143382302,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.0535806833799,0,0,0,4.74780082162832,0.916641696046735,0.717873024576814,0.399358000997982,1.28767814440971,1.11585728720936,0.201550417460179,0,0,0,0,0,0,0,2.38568906942791,1.90684768556206,0,0,0,0,0,0.607495566580247,0,0.0788057072991982,0,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0,0,0,5.17131825446202,3.43804764530994,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,1.77213635993397,1.09823638411767,0.876336514945499,2.29363678276028,2.44043913381075,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.834979926253974,0,1.75597244962866,1.8460472781668,0.756215088665154,1.52145955421279,4.19836678642813,9.99385941814081,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2156765231311,2.34323429584154,1.65349437200947,0.253663240775627,0,0,2.97726707033577,0,0,1.60710550763486,1.3451348888753,1.21393120847326,0.227662191351298,0.0887023701626388,0,0,0.679697329768317,2.36781984826257,0,0,1.25588948560822,2.98519620840404,0,0,0,0,5.86107662248582,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65603021748287,6.83206720752298,1.6906229103336,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0.458729283404541,4.87354582714934,0.157771562193185,1.76777874496378,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,6.36541065033211,3.7514978221865,4.1458471972939,2.68925789240928,0.213233981900981,0,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0.611207220914332,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p1@LCNL1 | |||
}} |
Revision as of 04:14, 23 January 2014
Short description: | p1@LCNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LCNL1_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | -185bp_to_ENST00000482657_5end |
EntrezGene: | LCNL1 |
HGNC: | 34436 |
UniProt: | F2Z3E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 3.62e-08 | 2 |