FFCP PHASE1:Hg19::chr17:56606705..56606717,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5414 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9165 | |||
|TSSclassifier=strong | |||
|UniProt=O43236 | |||
|association_with_transcript=-42bp_to_ENST00000317268,uc002iwm.1,uc002iwn.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_SEPT4_5end | |||
|id=chr17:56606705..56606717,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.37e-21;82!UBERON:0006215;2.89e-13;3!UBERON:0006241;1.29e-12;3!UBERON:0003057;1.29e-12;3!UBERON:0010122;2.46e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.50e-79!115;UBERON:0001049!1.35e-77!57;UBERON:0005068!1.35e-77!57;UBERON:0006241!1.35e-77!57;UBERON:0007135!1.35e-77!57;UBERON:0005743!5.43e-66!86;UBERON:0001017!7.82e-64!82;UBERON:0002616!1.06e-63!59;UBERON:0000073!1.42e-61!94;UBERON:0001016!1.42e-61!94;UBERON:0000955!3.22e-61!69;UBERON:0006238!3.22e-61!69;UBERON:0003075!3.96e-58!86;UBERON:0007284!3.96e-58!86;UBERON:0002346!5.16e-55!90;UBERON:0002780!1.03e-54!41;UBERON:0001890!1.03e-54!41;UBERON:0006240!1.03e-54!41;UBERON:0001893!2.53e-53!34;UBERON:0003080!3.13e-53!42;UBERON:0002020!3.79e-53!34;UBERON:0003528!3.79e-53!34;UBERON:0002791!8.26e-51!33;UBERON:0001869!5.73e-48!32;UBERON:0003056!3.48e-39!61;UBERON:0000153!7.55e-38!129;UBERON:0007811!7.55e-38!129;UBERON:0000033!1.21e-36!123;UBERON:0002619!7.72e-36!22;UBERON:0000956!4.13e-31!25;UBERON:0000203!4.13e-31!25;UBERON:0001950!4.92e-31!20;UBERON:0004121!2.93e-30!169;UBERON:0000924!2.87e-29!173;UBERON:0006601!2.87e-29!173;UBERON:0002308!3.59e-25!9;UBERON:0000125!3.59e-25!9;UBERON:0003076!1.31e-24!15;UBERON:0003057!1.31e-24!15;UBERON:0002420!1.36e-24!9;UBERON:0007245!1.36e-24!9;UBERON:0010009!1.36e-24!9;UBERON:0010011!1.36e-24!9;UBERON:0000454!1.36e-24!9;UBERON:0000025!3.33e-21!194;UBERON:0004732!2.28e-20!13;UBERON:0009663!5.60e-20!7;UBERON:0004733!8.43e-18!12;UBERON:0002028!8.43e-18!12;UBERON:0007277!8.43e-18!12;UBERON:0002298!4.91e-17!8;UBERON:0000200!1.17e-16!6;UBERON:0004111!2.03e-16!241;UBERON:0000477!4.59e-15!286;UBERON:0000064!6.62e-15!219;UBERON:0000349!4.80e-14!5;UBERON:0000483!1.02e-13!309;UBERON:0000119!1.85e-13!312;UBERON:0000475!5.49e-13!365;UBERON:0001871!3.04e-12!7;UBERON:0000369!9.42e-12!4;UBERON:0002435!9.42e-12!4;UBERON:0000204!9.42e-12!4;UBERON:0010082!9.42e-12!4;UBERON:0002680!4.04e-11!9;UBERON:0001895!4.04e-11!9;UBERON:0010092!4.04e-11!9;UBERON:0000062!4.33e-10!511;UBERON:0006331!1.03e-09!3;UBERON:0001872!1.09e-09!5;UBERON:0000988!1.53e-09!3;UBERON:0002771!3.08e-09!3;UBERON:0005383!4.66e-09!3;UBERON:0005382!4.66e-09!3;UBERON:0001896!5.34e-09!3;UBERON:0005290!5.34e-09!3;UBERON:0010096!5.34e-09!3;UBERON:0002240!8.03e-09!3;UBERON:0000481!8.47e-08!347;UBERON:0000922!2.30e-07!612;UBERON:0005162!2.47e-07!2;UBERON:0000122!2.47e-07!2;UBERON:0001897!3.04e-07!2;UBERON:0001875!4.08e-07!2;UBERON:0006514!4.08e-07!2;UBERON:0002148!7.05e-07!2;UBERON:0009662!7.05e-07!2;UBERON:0000467!7.17e-07!625;UBERON:0000480!7.81e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.40e-60;34!UBERON:0003528;7.58e-58;34!UBERON:0002020;7.58e-58;34!UBERON:0000073;1.69e-55;53!UBERON:0002616;1.69e-55;53!UBERON:0002791;4.39e-55;32!UBERON:0001869;6.36e-55;32!UBERON:0002780;4.70e-52;41!UBERON:0001890;4.70e-52;41!UBERON:0002619;1.22e-43;22!UBERON:0000956;3.67e-38;25!UBERON:0000203;3.67e-38;25!UBERON:0000125;1.60e-37;9!UBERON:0002308;1.60e-37;9!UBERON:0001017;1.66e-37;75!UBERON:0001950;1.03e-36;20!UBERON:0000955;6.66e-35;68!UBERON:0004732;1.13e-30;13!UBERON:0001016;6.98e-30;83!UBERON:0009663;1.18e-29;7!UBERON:0002420;1.99e-29;9!UBERON:0007245;1.99e-29;9!UBERON:0010009;1.99e-29;9!UBERON:0010011;1.99e-29;9!UBERON:0000454;1.99e-29;9!UBERON:0004733;9.29e-27;12!UBERON:0002028;9.29e-27;12!UBERON:0002298;1.11e-24;6!UBERON:0007023;4.70e-19;114!UBERON:0000200;1.24e-17;6!UBERON:0000369;4.71e-17;4!UBERON:0002435;4.71e-17;4!UBERON:0000204;4.71e-17;4!UBERON:0002680;1.54e-16;9!UBERON:0001895;1.54e-16;9!UBERON:0001872;4.68e-14;5!UBERON:0000349;1.12e-13;5!UBERON:0000988;1.34e-13;3!UBERON:0011216;4.53e-13;132!UBERON:0005383;5.77e-13;3!UBERON:0005382;5.77e-13;3!UBERON:0001896;7.56e-13;3!UBERON:0005290;7.56e-13;3!UBERON:0002240;1.29e-12;3!UBERON:0005174;1.29e-12;3!UBERON:0001137;1.29e-12;3!UBERON:0005162;2.56e-10;2!UBERON:0000122;2.56e-10;2!UBERON:0001897;3.13e-10;2!UBERON:0010225;3.13e-10;2!UBERON:0001875;4.46e-10;2!UBERON:0006514;4.46e-10;2!UBERON:0001871;5.64e-10;6!UBERON:0002771;1.36e-09;2!UBERON:0002148;1.36e-09;2!UBERON:0006331;1.36e-09;2!UBERON:0009662;1.36e-09;2!UBERON:0001954;2.41e-09;2!UBERON:0003022;2.41e-09;2!UBERON:0002421;2.41e-09;2!UBERON:0002600;2.41e-09;2!UBERON:0001873;2.46e-09;2!UBERON:0010314;3.15e-09;132!UBERON:0002021;1.94e-08;5!UBERON:0002037;7.53e-07;6 | |||
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|short_description=p4@SEPT4 | |||
}} |
Revision as of 16:33, 20 January 2014
Short description: | p4@SEPT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEPT4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -42bp_to_ENST00000317268, uc002iwm.1, uc002iwn.1_5end |
EntrezGene: | SEPT4 |
HGNC: | 9165 |
UniProt: | O43236 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data