FFCP PHASE1:Hg19::chr12:106976837..106976850,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:106976837..106976850,+ to FFCP PHASE1:Hg19::chr12:106976837..106976850,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5992 | |EntrezGene=5992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9985 | |HGNC=9985 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1T9 | |UniProt=F8W1T9 | ||
|association_with_transcript=26bp_to_ENST00000546882_5end | |||
|cluster_id=chr12:106976837..106976850,+ | |||
|coexpression_cluster_id=C361 | |||
|description=CAGE_peak_5_at_RFX4_5end | |||
|id=chr12:106976837..106976850,+ | |||
|ontology_enrichment_celltype=CL:0002605!2.70e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.91e-11;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.24e-18;82!UBERON:0006241;4.11e-16;3!UBERON:0003057;4.11e-16;3!UBERON:0006215;1.86e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.13e-119!57;UBERON:0005068!5.13e-119!57;UBERON:0006241!5.13e-119!57;UBERON:0007135!5.13e-119!57;UBERON:0001017!1.21e-107!82;UBERON:0005743!1.24e-105!86;UBERON:0002616!1.12e-99!59;UBERON:0000073!1.70e-94!94;UBERON:0001016!1.70e-94!94;UBERON:0000955!4.53e-90!69;UBERON:0006238!4.53e-90!69;UBERON:0002780!7.55e-90!41;UBERON:0001890!7.55e-90!41;UBERON:0006240!7.55e-90!41;UBERON:0003080!1.65e-87!42;UBERON:0003075!1.95e-84!86;UBERON:0007284!1.95e-84!86;UBERON:0002346!4.02e-80!90;UBERON:0001893!6.10e-76!34;UBERON:0002020!1.14e-75!34;UBERON:0003528!1.14e-75!34;UBERON:0002791!2.13e-73!33;UBERON:0001869!2.54e-70!32;UBERON:0003056!1.66e-60!61;UBERON:0000956!9.15e-57!25;UBERON:0000203!9.15e-57!25;UBERON:0007023!7.40e-51!115;UBERON:0002619!5.62e-50!22;UBERON:0000033!8.70e-50!123;UBERON:0004121!5.36e-47!169;UBERON:0000153!6.78e-47!129;UBERON:0007811!6.78e-47!129;UBERON:0000924!1.34e-45!173;UBERON:0006601!1.34e-45!173;UBERON:0001950!9.66e-45!20;UBERON:0003076!1.29e-30!15;UBERON:0003057!1.29e-30!15;UBERON:0000025!2.00e-27!194;UBERON:0004733!2.92e-22!12;UBERON:0002028!2.92e-22!12;UBERON:0007277!2.92e-22!12;UBERON:0004111!1.23e-21!241;UBERON:0004732!2.23e-20!13;UBERON:0002420!3.38e-20!9;UBERON:0007245!3.38e-20!9;UBERON:0010009!3.38e-20!9;UBERON:0010011!3.38e-20!9;UBERON:0000454!3.38e-20!9;UBERON:0002308!8.16e-20!9;UBERON:0000125!8.16e-20!9;UBERON:0000477!5.14e-18!286;UBERON:0002298!1.63e-17!8;UBERON:0001871!8.08e-17!7;UBERON:0000483!1.86e-16!309;UBERON:0000119!3.61e-16!312;UBERON:0002021!4.35e-15!5;UBERON:0009663!5.84e-15!7;UBERON:0000349!7.95e-15!5;UBERON:0001894!8.82e-15!7;UBERON:0006222!8.82e-15!7;UBERON:0002680!2.83e-14!9;UBERON:0001895!2.83e-14!9;UBERON:0010092!2.83e-14!9;UBERON:0001872!6.56e-14!5;UBERON:0000064!9.23e-14!219;UBERON:0000475!6.10e-12!365;UBERON:0000200!2.74e-11!6;UBERON:0002240!2.16e-10!3;UBERON:0001896!3.01e-10!3;UBERON:0005290!3.01e-10!3;UBERON:0010096!3.01e-10!3;UBERON:0006331!2.54e-09!3;UBERON:0000988!5.89e-09!3;UBERON:0002771!7.77e-09!3;UBERON:0002037!1.31e-07!6;UBERON:0006215!1.31e-07!6;UBERON:0001897!2.25e-07!2;UBERON:0000369!3.68e-07!4;UBERON:0002435!3.68e-07!4;UBERON:0000204!3.68e-07!4;UBERON:0010082!3.68e-07!4;UBERON:0000062!3.69e-07!511;UBERON:0003296!3.75e-07!4;UBERON:0010133!3.75e-07!4;UBERON:0001875!3.98e-07!2;UBERON:0006514!3.98e-07!2;UBERON:0000922!4.36e-07!612;UBERON:0001876!5.04e-07!2;UBERON:0000481!6.07e-07!347;UBERON:0001954!7.15e-07!2;UBERON:0003022!7.15e-07!2;UBERON:0002421!7.15e-07!2;UBERON:0002600!7.15e-07!2;UBERON:0000007!8.76e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.64e-62;41!UBERON:0001890;8.64e-62;41!UBERON:0000073;9.41e-56;53!UBERON:0002616;9.41e-56;53!UBERON:0001893;1.64e-54;34!UBERON:0002791;7.95e-53;32!UBERON:0001869;2.03e-50;32!UBERON:0003528;3.52e-49;34!UBERON:0002020;3.52e-49;34!UBERON:0002619;5.64e-43;22!UBERON:0001950;7.02e-41;20!UBERON:0000956;1.24e-37;25!UBERON:0000203;1.24e-37;25!UBERON:0001017;1.05e-36;75!UBERON:0001016;6.35e-33;83!UBERON:0002420;1.42e-32;9!UBERON:0007245;1.42e-32;9!UBERON:0010009;1.42e-32;9!UBERON:0010011;1.42e-32;9!UBERON:0000454;1.42e-32;9!UBERON:0000955;5.63e-30;68!UBERON:0000125;4.06e-25;9!UBERON:0002308;4.06e-25;9!UBERON:0009663;3.58e-24;7!UBERON:0002021;4.87e-24;5!UBERON:0001894;4.80e-17;7!UBERON:0001871;1.23e-16;6!UBERON:0002240;4.11e-16;3!UBERON:0005174;4.11e-16;3!UBERON:0001137;4.11e-16;3!UBERON:0001896;6.44e-16;3!UBERON:0005290;6.44e-16;3!UBERON:0000349;1.83e-15;5!UBERON:0004733;2.69e-14;12!UBERON:0002028;2.69e-14;12!UBERON:0007023;5.81e-14;114!UBERON:0002298;1.75e-13;6!UBERON:0011216;2.05e-13;132!UBERON:0004732;3.77e-13;13!UBERON:0002784;1.04e-11;4!UBERON:0001897;3.40e-11;2!UBERON:0010225;3.40e-11;2!UBERON:0000369;5.10e-11;4!UBERON:0002435;5.10e-11;4!UBERON:0003296;5.10e-11;4!UBERON:0010133;5.10e-11;4!UBERON:0000204;5.10e-11;4!UBERON:0001875;6.03e-11;2!UBERON:0006514;6.03e-11;2!UBERON:0001876;2.99e-10;2!UBERON:0000007;2.99e-10;2!UBERON:0010314;2.03e-09;132!UBERON:0001872;6.54e-09;5!UBERON:0005383;4.13e-07;3!UBERON:0005382;4.13e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.93e-108,56;UBERON:0005068,1.93e-108,56;UBERON:0006241,1.93e-108,56;UBERON:0007135,1.93e-108,56;UBERON:0000073,2.04e-95,53;UBERON:0002616,2.04e-95,53;UBERON:0001017,5.94e-86,81;UBERON:0002780,2.27e-82,41;UBERON:0001890,2.27e-82,41;UBERON:0003080,2.27e-82,41;UBERON:0006240,2.27e-82,41;UBERON:0001016,7.99e-77,89;UBERON:0000955,1.01e-76,68;UBERON:0006238,1.01e-76,68;UBERON:0003075,3.26e-72,82;UBERON:0007284,3.26e-72,82;UBERON:0002346,1.47e-68,86;UBERON:0001893,3.40e-66,34;UBERON:0003528,2.09e-60,34;UBERON:0002020,2.09e-60,34;UBERON:0002791,2.09e-58,32;UBERON:0001869,4.07e-58,32;UBERON:0010371,1.48e-55,104;UBERON:0003056,8.45e-54,61;UBERON:0010314,6.40e-45,132;UBERON:0007023,1.13e-44,114;UBERON:0002619,7.08e-43,22;UBERON:0001950,8.83e-41,20;UBERON:0000956,1.52e-37,25;UBERON:0000203,1.52e-37,25;UBERON:0004121,4.28e-37,171;UBERON:0000924,4.28e-37,171;UBERON:0006601,4.28e-37,171;UBERON:0002420,7.42e-33,9;UBERON:0007245,7.42e-33,9;UBERON:0010009,7.42e-33,9;UBERON:0010011,7.42e-33,9;UBERON:0000454,7.42e-33,9;UBERON:0011216,4.81e-30,223;UBERON:0000025,7.45e-27,192;UBERON:0003076,1.18e-25,15;UBERON:0003057,1.18e-25,15;UBERON:0000125,3.46e-25,9;UBERON:0002308,3.46e-25,9;UBERON:0009663,4.16e-24,7;UBERON:0002021,4.78e-24,5;UBERON:0004111,5.18e-20,240;UBERON:0001894,3.86e-17,7;UBERON:0006222,3.86e-17,7;UBERON:0001871,8.99e-17,6;UBERON:0002240,3.13e-16,3;UBERON:0005174,3.13e-16,3;UBERON:0001137,3.13e-16,3;UBERON:0001896,5.43e-16,3;UBERON:0005290,5.43e-16,3;UBERON:0010096,5.43e-16,3;UBERON:0000349,7.94e-16,5;UBERON:0004733,2.21e-14,12;UBERON:0002028,2.21e-14,12;UBERON:0007277,2.21e-14,12;UBERON:0000483,4.39e-14,306;UBERON:0000119,7.12e-14,309;UBERON:0002298,1.21e-13,6;UBERON:0004732,3.15e-13,13;UBERON:0002784,8.24e-12,4;UBERON:0001897,3.17e-11,2;UBERON:0010225,3.17e-11,2;UBERON:0000369,4.14e-11,4;UBERON:0002435,4.14e-11,4;UBERON:0000204,4.14e-11,4;UBERON:0010082,4.14e-11,4;UBERON:0003296,4.29e-11,4;UBERON:0010133,4.29e-11,4;UBERON:0001875,8.12e-11,2;UBERON:0006514,8.12e-11,2;UBERON:0001876,1.20e-10,2;UBERON:0000007,2.99e-10,2;UBERON:0001872,7.96e-09,5;UBERON:0000923,2.55e-07,560;UBERON:0010316,2.55e-07,560;UBERON:0005291,2.55e-07,560;UBERON:0006598,2.55e-07,560;UBERON:0010317,2.55e-07,560;UBERON:0002532,2.55e-07,560;UBERON:0002050,3.28e-07,564;UBERON:0005383,3.76e-07,3;UBERON:0005382,3.76e-07,3;UBERON:0005423,9.24e-07,581 | |||
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| ||
|short_description=p5@RFX4 | |||
}} | }} |
Latest revision as of 03:01, 16 September 2015
Short description: | p5@RFX4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RFX4_5end |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | 26bp_to_ENST00000546882_5end |
EntrezGene: | RFX4 |
HGNC: | 9985 |
UniProt: | F8W1T9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data