FFCP PHASE1:Hg19::chrX:75005054..75005094,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:75005054..75005094,- to FFCP PHASE1:Hg19::chrX:75005054..75005094,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=139599 | |EntrezGene=139599 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24935 | |HGNC=24935 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TD90 | |UniProt=Q8TD90 | ||
|association_with_transcript=0bp_to_ENST00000373359,NM_138703,uc004ecj.1_5end | |||
|cluster_id=chrX:75005054..75005094,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_MAGEE2_5end | |||
|id=chrX:75005054..75005094,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.99e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.11e-18;82!UBERON:0006215;2.99e-13;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.23e-79!57;UBERON:0005068!5.23e-79!57;UBERON:0006241!5.23e-79!57;UBERON:0007135!5.23e-79!57;UBERON:0001017!2.93e-73!82;UBERON:0005743!1.21e-71!86;UBERON:0000073!2.24e-70!94;UBERON:0001016!2.24e-70!94;UBERON:0002616!2.94e-69!59;UBERON:0002780!9.91e-67!41;UBERON:0001890!9.91e-67!41;UBERON:0006240!9.91e-67!41;UBERON:0000955!5.30e-65!69;UBERON:0006238!5.30e-65!69;UBERON:0003080!7.12e-65!42;UBERON:0007023!6.16e-62!115;UBERON:0003075!1.63e-60!86;UBERON:0007284!1.63e-60!86;UBERON:0002346!4.36e-57!90;UBERON:0002020!2.35e-54!34;UBERON:0003528!2.35e-54!34;UBERON:0001893!4.64e-54!34;UBERON:0002791!4.47e-52!33;UBERON:0001869!5.41e-51!32;UBERON:0003056!5.39e-48!61;UBERON:0000956!6.79e-42!25;UBERON:0000203!6.79e-42!25;UBERON:0002619!8.65e-41!22;UBERON:0004121!6.41e-38!169;UBERON:0000033!2.06e-37!123;UBERON:0001950!2.87e-37!20;UBERON:0000924!1.31e-36!173;UBERON:0006601!1.31e-36!173;UBERON:0000153!2.19e-36!129;UBERON:0007811!2.19e-36!129;UBERON:0000025!1.83e-19!194;UBERON:0004111!1.87e-15!241;UBERON:0003076!4.64e-15!15;UBERON:0003057!4.64e-15!15;UBERON:0004732!1.11e-14!13;UBERON:0001894!9.11e-14!7;UBERON:0006222!9.11e-14!7;UBERON:0002308!1.14e-13!9;UBERON:0000125!1.14e-13!9;UBERON:0002420!2.32e-13!9;UBERON:0007245!2.32e-13!9;UBERON:0010009!2.32e-13!9;UBERON:0010011!2.32e-13!9;UBERON:0000454!2.32e-13!9;UBERON:0000200!2.74e-13!6;UBERON:0004733!4.46e-13!12;UBERON:0002028!4.46e-13!12;UBERON:0007277!4.46e-13!12;UBERON:0001871!2.02e-12!7;UBERON:0000477!2.32e-12!286;UBERON:0000483!5.10e-12!309;UBERON:0000119!9.70e-12!312;UBERON:0002298!1.12e-11!8;UBERON:0001872!1.56e-11!5;UBERON:0000475!1.88e-11!365;UBERON:0000064!2.05e-11!219;UBERON:0002021!6.58e-11!5;UBERON:0000349!2.40e-10!5;UBERON:0009663!4.71e-10!7;UBERON:0000481!1.17e-09!347;UBERON:0000922!6.82e-09!612;UBERON:0003296!8.56e-09!4;UBERON:0010133!8.56e-09!4;UBERON:0002680!1.53e-08!9;UBERON:0001895!1.53e-08!9;UBERON:0010092!1.53e-08!9;UBERON:0000062!2.09e-07!511;UBERON:0002771!2.11e-07!3;UBERON:0000923!2.44e-07!604;UBERON:0005291!2.44e-07!604;UBERON:0006598!2.44e-07!604;UBERON:0002532!2.44e-07!604;UBERON:0002050!2.73e-07!605;UBERON:0005423!2.73e-07!605;UBERON:0000988!3.12e-07!3;UBERON:0000480!3.27e-07!626;UBERON:0006331!8.22e-07!3;UBERON:0000467!8.37e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.40e-70;32!UBERON:0002619;4.02e-70;22!UBERON:0003528;3.33e-69;34!UBERON:0002020;3.33e-69;34!UBERON:0000956;1.43e-67;25!UBERON:0000203;1.43e-67;25!UBERON:0002791;1.92e-65;32!UBERON:0002780;8.14e-64;41!UBERON:0001890;8.14e-64;41!UBERON:0001893;1.99e-63;34!UBERON:0001950;2.66e-63;20!UBERON:0000073;8.27e-59;53!UBERON:0002616;8.27e-59;53!UBERON:0000955;1.63e-43;68!UBERON:0001017;2.18e-39;75!UBERON:0001016;2.30e-33;83!UBERON:0000200;6.08e-24;6!UBERON:0001872;2.93e-20;5!UBERON:0002021;2.10e-19;5!UBERON:0001894;2.12e-18;7!UBERON:0004732;5.66e-18;13!UBERON:0002680;1.49e-15;9!UBERON:0001895;1.49e-15;9!UBERON:0004733;3.05e-15;12!UBERON:0002028;3.05e-15;12!UBERON:0003296;3.67e-15;4!UBERON:0010133;3.67e-15;4!UBERON:0007023;7.20e-15;114!UBERON:0000125;8.13e-15;9!UBERON:0002308;8.13e-15;9!UBERON:0001871;1.23e-13;6!UBERON:0011216;2.81e-13;132!UBERON:0001870;5.90e-13;3!UBERON:0000988;3.56e-12;3!UBERON:0000349;4.21e-12;5!UBERON:0002420;2.57e-10;9!UBERON:0007245;2.57e-10;9!UBERON:0010009;2.57e-10;9!UBERON:0010011;2.57e-10;9!UBERON:0000454;2.57e-10;9!UBERON:0002298;2.77e-10;6!UBERON:0000369;2.13e-09;4!UBERON:0002435;2.13e-09;4!UBERON:0000204;2.13e-09;4!UBERON:0002702;2.98e-09;2!UBERON:0002784;4.40e-09;4!UBERON:0002771;4.90e-09;2!UBERON:0010314;6.15e-09;132!UBERON:0009663;6.15e-09;7!UBERON:0001905;9.55e-09;2!UBERON:0002757;9.55e-09;2!UBERON:0010134;9.55e-09;2!UBERON:0005408;9.55e-09;2!UBERON:0001899;9.55e-09;2!UBERON:0002148;1.12e-08;2!UBERON:0006331;1.12e-08;2!UBERON:0009662;1.12e-08;2!UBERON:0001954;2.14e-08;2!UBERON:0003022;2.14e-08;2!UBERON:0002421;2.14e-08;2!UBERON:0002600;2.14e-08;2!UBERON:0000007;4.06e-08;2!UBERON:0002037;8.28e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.40e-110,56;UBERON:0005068,1.40e-110,56;UBERON:0006241,1.40e-110,56;UBERON:0007135,1.40e-110,56;UBERON:0000073,4.59e-106,53;UBERON:0002616,4.59e-106,53;UBERON:0001017,1.31e-102,81;UBERON:0001016,1.42e-95,89;UBERON:0000955,9.07e-94,68;UBERON:0006238,9.07e-94,68;UBERON:0002780,2.85e-92,41;UBERON:0001890,2.85e-92,41;UBERON:0003080,2.85e-92,41;UBERON:0006240,2.85e-92,41;UBERON:0003528,2.10e-80,34;UBERON:0002020,2.10e-80,34;UBERON:0001869,1.52e-79,32;UBERON:0003075,1.05e-76,82;UBERON:0007284,1.05e-76,82;UBERON:0001893,1.32e-74,34;UBERON:0002791,2.17e-73,32;UBERON:0002346,9.72e-73,86;UBERON:0002619,6.03e-70,22;UBERON:0000956,2.76e-67,25;UBERON:0000203,2.76e-67,25;UBERON:0003056,9.83e-64,61;UBERON:0001950,2.89e-63,20;UBERON:0010371,1.25e-58,104;UBERON:0007023,9.14e-48,114;UBERON:0010314,1.08e-46,132;UBERON:0004121,8.62e-46,171;UBERON:0000924,8.62e-46,171;UBERON:0006601,8.62e-46,171;UBERON:0011216,3.84e-36,223;UBERON:0000025,5.63e-26,192;UBERON:0000200,9.98e-24,6;UBERON:0001872,2.11e-20,5;UBERON:0003076,2.13e-19,15;UBERON:0003057,2.13e-19,15;UBERON:0002021,3.21e-19,5;UBERON:0004111,6.59e-19,240;UBERON:0001894,1.71e-18,7;UBERON:0006222,1.71e-18,7;UBERON:0004732,5.07e-18,13;UBERON:0002680,1.19e-15,9;UBERON:0001895,1.19e-15,9;UBERON:0010092,1.19e-15,9;UBERON:0004733,2.77e-15,12;UBERON:0002028,2.77e-15,12;UBERON:0007277,2.77e-15,12;UBERON:0003296,3.17e-15,4;UBERON:0010133,3.17e-15,4;UBERON:0000125,6.12e-15,9;UBERON:0002308,6.12e-15,9;UBERON:0000483,1.02e-13,306;UBERON:0001871,1.35e-13,6;UBERON:0000119,1.72e-13,309;UBERON:0001870,6.53e-13,3;UBERON:0000988,2.78e-12,3;UBERON:0000349,4.09e-12,5;UBERON:0002420,1.98e-10,9;UBERON:0007245,1.98e-10,9;UBERON:0010009,1.98e-10,9;UBERON:0010011,1.98e-10,9;UBERON:0000454,1.98e-10,9;UBERON:0002298,2.65e-10,6;UBERON:0000369,1.65e-09,4;UBERON:0002435,1.65e-09,4;UBERON:0000204,1.65e-09,4;UBERON:0010082,1.65e-09,4;UBERON:0002702,3.29e-09,2;UBERON:0002784,3.88e-09,4;UBERON:0009663,5.49e-09,7;UBERON:0002771,6.22e-09,2;UBERON:0002148,8.85e-09,2;UBERON:0006331,8.85e-09,2;UBERON:0009662,8.85e-09,2;UBERON:0001905,9.20e-09,2;UBERON:0002757,9.20e-09,2;UBERON:0010134,9.20e-09,2;UBERON:0005408,9.20e-09,2;UBERON:0001899,9.20e-09,2;UBERON:0001954,3.01e-08,2;UBERON:0003022,3.01e-08,2;UBERON:0002421,3.01e-08,2;UBERON:0002600,3.01e-08,2;UBERON:0000923,3.33e-08,560;UBERON:0010316,3.33e-08,560;UBERON:0005291,3.33e-08,560;UBERON:0006598,3.33e-08,560;UBERON:0010317,3.33e-08,560;UBERON:0002532,3.33e-08,560;UBERON:0000007,3.63e-08,2;UBERON:0002050,4.54e-08,564;UBERON:0005423,1.62e-07,581;UBERON:0000922,3.55e-07,592;UBERON:0002037,7.89e-07,6;UBERON:0006215,7.89e-07,6 | |||
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| ||
|short_description=p1@MAGEE2 | |||
}} | }} |
Latest revision as of 11:06, 16 September 2015
Short description: | p1@MAGEE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAGEE2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000373359, NM_138703, uc004ecj.1_5end |
EntrezGene: | MAGEE2 |
HGNC: | 24935 |
UniProt: | Q8TD90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.99e-08 | 8 |